Dynamical Analysis of the Regulatory Network Defining the Dorsal–Ventral Boundary of the Drosophila Wing Imaginal Disc

Por González, Aitor, Chaouiya, Claudine, Thieffry, Denis
Publicado em 2006

Functional organisation of Escherichia coli transcriptional regulatory network

Por Martínez-Antonio, Agustino, Janga, Sarath Chandra, Thieffry, Denis
Publicado em 2008

Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling

Por Naldi, Aurélien, Carneiro, Jorge, Chaouiya, Claudine, Thieffry, Denis
Publicado em 2010

Logical modelling and analysis of the budding yeast cell cycle

Por Fauré, Adrien, Chaouiya, Claudine, Ciliberto, Andrea, Thieffry, Denis
Publicado no BMC Bioinformatics (2007)

Dynamical modeling of syncytial mitotic cycles in Drosophila embryos

Por Calzone, Laurence, Thieffry, Denis, Tyson, John J, Novak, Bela
Publicado em 2007

Transcriptional and epigenetic signatures of zygotic genome activation during early drosophila embryogenesis

Por Darbo, Elodie, Herrmann, Carl, Lecuit, Thomas, Thieffry, Denis, van Helden, Jacques
Publicado em 2013

GOToolBox: functional analysis of gene datasets based on Gene Ontology

Por Martin, David, Brun, Christine, Remy, Elisabeth, Mouren, Pierre, Thieffry, Denis, Jacq, Bernard
Publicado em 2004

Metagenome Annotation Using a Distributed Grid of Undergraduate Students

Por Hingamp, Pascal, Brochier, Céline, Talla, Emmanuel, Gautheret, Daniel, Thieffry, Denis, Herrmann, Carl
Publicado em 2008

Mathematical Modelling of Cell-Fate Decision in Response to Death Receptor Engagement

Por Calzone, Laurence, Tournier, Laurent, Fourquet, Simon, Thieffry, Denis, Zhivotovsky, Boris, Barillot, Emmanuel, Zinovyev, Andrei
Publicado em 2010

RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets

Por Thomas-Chollier, Morgane, Herrmann, Carl, Defrance, Matthieu, Sand, Olivier, Thieffry, Denis, van Helden, Jacques
Publicado em 2012

Integrative Modelling of the Influence of MAPK Network on Cancer Cell Fate Decision

Por Grieco, Luca, Calzone, Laurence, Bernard-Pierrot, Isabelle, Radvanyi, François, Kahn-Perlès, Brigitte, Thieffry, Denis
Publicado em 2013

Correction: Integrative Modelling of the Influence of MAPK Network on Cancer Cell Fate Decision

Por Grieco, Luca, Calzone, Laurence, Bernard-Pierrot, Isabelle, Radvanyi, François, Kahn-Perlès, Brigitte, Thieffry, Denis
Publicado em 2013

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling

Por Flobak, Åsmund, Baudot, Anaïs, Remy, Elisabeth, Thommesen, Liv, Thieffry, Denis, Kuiper, Martin, Lægreid, Astrid
Publicado no PLoS Comput Biol (2015)

Model Checking to Assess T-Helper Cell Plasticity

Por Abou-Jaoudé, Wassim, Monteiro, Pedro T., Naldi, Aurélien, Grandclaudon, Maximilien, Soumelis, Vassili, Chaouiya, Claudine, Thieffry, Denis
Publicado no Front Bioeng Biotechnol (2015)

Logical Modeling and Dynamical Analysis of Cellular Networks

Por Abou-Jaoudé, Wassim, Traynard, Pauline, Monteiro, Pedro T., Saez-Rodriguez, Julio, Helikar, Tomáš, Thieffry, Denis, Chaouiya, Claudine
Publicado no Front Genet (2016)

RSAT 2011: regulatory sequence analysis tools

Por Thomas-Chollier, Morgane, Defrance, Matthieu, Medina-Rivera, Alejandra, Sand, Olivier, Herrmann, Carl, Thieffry, Denis, van Helden, Jacques
Publicado em 2011

A Transcription Factor Pulse Can Prime Chromatin for Heritable Transcriptional Memory

Por Iberg-Badeaux, Aimee, Collombet, Samuel, Laurent, Benoit, van Oevelen, Chris, Chin, Kuo-Kai, Thieffry, Denis, Graf, Thomas, Shi, Yang
Publicado no Mol Cell Biol (2017)

Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes

Por Mbodj, Abibatou, Gustafson, E. Hilary, Ciglar, Lucia, Junion, Guillaume, Gonzalez, Aitor, Girardot, Charles, Perrin, Laurent, Furlong, Eileen E. M., Thieffry, Denis
Publicado no PLoS Comput Biol (2016)

CoCAS: a ChIP-on-chip analysis suite

Por Benoukraf, Touati, Cauchy, Pierre, Fenouil, Romain, Jeanniard, Adrien, Koch, Frederic, Jaeger, Sébastien, Thieffry, Denis, Imbert, Jean, Andrau, Jean-Christophe, Spicuglia, Salvatore, Ferrier, Pierre
Publicado em 2009

Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance

Por Sahin, Özgür, Fröhlich, Holger, Löbke, Christian, Korf, Ulrike, Burmester, Sara, Majety, Meher, Mattern, Jens, Schupp, Ingo, Chaouiya, Claudine, Thieffry, Denis, Poustka, Annemarie, Wiemann, Stefan, Beissbarth, Tim, Arlt, Dorit
Publicado em 2009