Jointly creating digital abstracts: dealing with synonymy and polysemy

af Vercruysse Steven, Kuiper Martin
Udgivet 2012-10-01

Jointly creating digital abstracts: dealing with synonymy and polysemy

af Vercruysse, Steven, Kuiper, Martin
Udgivet 2012

Genes2GO: A web application for querying gene sets for specific GO terms

af Chawla, Konika, Kuiper, Martin
Udgivet i Bioinformation (2016)

A foundation for reference models for drug combinations with an application to Loewe’s reference model

af De Mulder, Wim, Kuiper, Martin
Udgivet i BMC Bioinformatics (2020)

OLSVis: an animated, interactive visual browser for bio-ontologies

af Vercruysse, Steven, Venkatesan, Aravind, Kuiper, Martin
Udgivet 2012

Extracting expression modules from perturbational gene expression compendia

af Maere, Steven, Van Dijck, Patrick, Kuiper, Martin
Udgivet 2008

DASS-GUI: a user interface for identification and analysis of significant patterns in non-sequential data

af Hollunder, Jens, Friedel, Maik, Kuiper, Martin, Wilhelm, Thomas
Udgivet 2010

Silencing trust: confidence and familiarity in re-engineering knowledge infrastructures

af Nydal, Rune, Bennett, Gaymon, Kuiper, Martin, Lægreid, Astrid
Udgivet i Med Health Care Philos (2020)

CausalBuilder: bringing the MI2CAST causal interaction annotation standard to the curator

af Touré, Vasundra, Zobolas, John, Kuiper, Martin, Vercruysse, Steven
Udgivet i Database (Oxford) (2021)

UniBioDicts: Unified access to Biological Dictionaries

af Zobolas, John, Touré, Vasundra, Kuiper, Martin, Vercruysse, Steven
Udgivet i Bioinformatics (2021)

Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology

af Aranguren, Mikel Egaña, Antezana, Erick, Kuiper, Martin, Stevens, Robert
Udgivet 2008

ONTO-ToolKit: enabling bio-ontology engineering via Galaxy

af Antezana, Erick, Venkatesan, Aravind, Mungall, Chris, Mironov, Vladimir, Kuiper, Martin
Udgivet 2010

The status of causality in biological databases: data resources and data retrieval possibilities to support logical modeling

af Touré, Vasundra, Flobak, Åsmund, Niarakis, Anna, Vercruysse, Steven, Kuiper, Martin
Udgivet i Brief Bioinform (2020)

Genetic Analysis of Variation in Gene Expression in Arabidopsis thaliana

af Vuylsteke, Marnik, van Eeuwijk, Fred, Van Hummelen, Paul, Kuiper, Martin, Zabeau, Marc
Udgivet 2005

Gauging triple stores with actual biological data

af Mironov, Vladimir, Seethappan, Nirmala, Blondé, Ward, Antezana, Erick, Splendiani, Andrea, Kuiper, Martin
Udgivet 2012

A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines

af Tsirvouli, Eirini, Touré, Vasundra, Niederdorfer, Barbara, Vázquez, Miguel, Flobak, Åsmund, Kuiper, Martin
Udgivet i Front Mol Biosci (2020)

The Cytoscape BioGateway App: explorative network building from an RDF store

af Holmås, Stian, Riudavets Puig, Rafel, Acencio, Marcio Luis, Mironov, Vladimir, Kuiper, Martin
Udgivet i Bioinformatics (2020)

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling

af Flobak, Åsmund, Baudot, Anaïs, Remy, Elisabeth, Thommesen, Liv, Thieffry, Denis, Kuiper, Martin, Lægreid, Astrid
Udgivet i PLoS Comput Biol (2015)

Strategies to Enhance Logic Modeling-Based Cell Line-Specific Drug Synergy Prediction

af Niederdorfer, Barbara, Touré, Vasundra, Vazquez, Miguel, Thommesen, Liv, Kuiper, Martin, Lægreid, Astrid, Flobak, Åsmund
Udgivet i Front Physiol (2020)

Finding gene regulatory network candidates using the gene expression knowledge base

af Venkatesan, Aravind, Tripathi, Sushil, Sanz de Galdeano, Alejandro, Blondé, Ward, Lægreid, Astrid, Mironov, Vladimir, Kuiper, Martin
Udgivet i BMC Bioinformatics (2014)