Controlling for conservation in genome-wide DNA methylation studies

od Singer, Meromit, Pachter, Lior
Wydane w BMC Genomics (2015)

Revolutionizing cancer immunology: the power of next-generation sequencing technologies

od Singer, Meromit, Anderson, Ana C.
Wydane w Cancer Immunol Res (2019)

Molecular dissection of CD8(+) T cell dysfunction

od Wang, Chao, Singer, Meromit, Anderson, Ana C.
Wydane w Trends Immunol (2017)

A diverse epigenetic landscape at human exons with implication for expression

od Singer, Meromit, Kosti, Idit, Pachter, Lior, Mandel-Gutfreund, Yael
Wydane w Nucleic Acids Res (2015)

Identification and correction of systematic error in high-throughput sequence data

od Meacham, Frazer, Boffelli, Dario, Dhahbi, Joseph, Martin, David IK, Singer, Meromit, Pachter, Lior
Wydane 2011

MetMap Enables Genome-Scale Methyltyping for Determining Methylation States in Populations

od Singer, Meromit, Boffelli, Dario, Dhahbi, Joseph, Schönhuth, Alexander, Schroth, Gary P., Martin, David I. K., Pachter, Lior
Wydane 2010

Combinatorial prediction of marker panels from single‐cell transcriptomic data

od Delaney, Conor, Schnell, Alexandra, Cammarata, Louis V, Yao‐Smith, Aaron, Regev, Aviv, Kuchroo, Vijay K, Singer, Meromit
Wydane w Mol Syst Biol (2019)

Phyloepigenomic comparison of great apes reveals a correlation between somatic and germline methylation states

od Martin, David I.K., Singer, Meromit, Dhahbi, Joseph, Mao, Guanxiong, Zhang, Lu, Schroth, Gary P., Pachter, Lior, Boffelli, Dario
Wydane 2011

A bilateral tumor model identifies transcriptional programs associated with patient response to immune checkpoint blockade

od Chen, Ivy X., Newcomer, Kathleen, Pauken, Kristen E., Juneja, Vikram R., Naxerova, Kamila, Wu, Michelle W., Pinter, Matthias, Sen, Debattama R., Singer, Meromit, Sharpe, Arlene H., Jain, Rakesh K.
Wydane w Proc Natl Acad Sci U S A (2020)

Circulating clonally expanded T cells reflect functions of tumor-infiltrating T cells

od Lucca, Liliana E., Axisa, Pierre-Paul, Lu, Benjamin, Harnett, Brian, Jessel, Shlomit, Zhang, Le, Raddassi, Khadir, Zhang, Lin, Olino, Kelly, Clune, James, Singer, Meromit, Kluger, Harriet M., Hafler, David A.
Wydane w J Exp Med (2021)

Blockade of IL-22 signaling reverses erythroid dysfunction in stress-induced anemias

od Raundhal, Mahesh, Ghosh, Shrestha, Myers, Samuel A., Cuoco, Michael S., Singer, Meromit, Carr, Steven A., Waikar, Sushrut S., Bonventre, Joseph V., Ritz, Jerome, Stone, Richard M., Steensma, David P., Regev, Aviv, Glimcher, Laurie H.
Wydane w Nat Immunol (2021)

Effect of IL-7 therapy on Phospho-ribosomal protein S6 and TRAF1 expression in HIV-specific CD8 T cells in patients receiving antiretroviral therapy(–3)

od Wang, Chao, Edilova, Maria I., Wagar, Lisa E., Mujib, Shariq, Singer, Meromit, Bernard, Nicole F., Croughs, Thérèse, Lederman, Michael M., Sereti, Irini, Fischl, Margaret A., Kremmer, Elisabeth, Ostrowski, Mario, Routy, Jean-Pierre, Watts, Tania H.
Wydane w J Immunol (2017)

Tim-3 adaptor protein Bat3 is a molecular checkpoint of T cell terminal differentiation and exhaustion

od Zhu, Chen, Dixon, Karen O., Newcomer, Kathleen, Gu, Guangxiang, Xiao, Sheng, Zaghouani, Sarah, Schramm, Markus A., Wang, Chao, Zhang, Huiyuan, Goto, Kouichiro, Christian, Elena, Rangachari, Manu, Rosenblatt-Rosen, Orit, Okada, Hitoshi, Mak, Tak, Singer, Meromit, Regev, Aviv, Kuchroo, Vijay
Wydane w Sci Adv (2021)

A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells

od Singer, Meromit, Wang, Chao, Cong, Le, Marjanovic, Nemanja D., Kowalczyk, Monika S., Zhang, Huiyuan, Nyman, Jackson, Sakuishi, Kaori, Kurtulus, Sema, Gennert, David, Xia, Junrong, Kwon, John Y.H., Nevin, James, Herbst, Rebecca H., Yanai, Itai, Rozenblatt-Rosen, Orit, Kuchroo, Vijay K., Regev, Aviv, Anderson, Ana C.
Wydane w Cell (2016)

Endogenous glucocorticoid signaling regulates effector differentiation and development of dysfunction in CD8(+) T cells in the tumor microenvironment

od Acharya, Nandini, Madi, Asaf, Zhang, Huiyuan, Klapholz, Max, Escobar, Giulia, Dulberg, Shai, Christian, Elena, Ferreira, Michelle, Dixon, Karen O., Fell, Geoffrey, Tooley, Katherine, Mangani, Davide, Xia, Junrong, Singer, Meromit, Bosenberg, Marcus, Neuberg, Donna, Rozenblatt-Rosen, Orit, Regev, Aviv, Kuchroo, Vijay K., Anderson, Ana C.
Wydane w Immunity (2020)

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

od Chihara, Norio, Madi, Asaf, Kondo, Takaaki, Zhang, Huiyuan, Acharya, Nandini, Singer, Meromit, Nyman, Jackson, Marjanovic, Nemanja D., Kowalczyk, Monika S., Wang, Chao, Kurtulus, Sema, Law, Travis, Etminan, Yasaman, Nevin, James, Buckley, Christopher D., Burkett, Patrick R., Buenrostro, Jason D., Rozenblatt-Rosen, Orit, Anderson, Ana C., Regev, Aviv, Kuchroo, Vijay K.
Wydane w Nature (2018)

Purine synthesis promotes maintenance of brain tumor initiating cells in glioma

od Wang, Xiuxing, Yang, Kailin, Xie, Qi, Wu, Qiulian, Mack, Stephen C, Shi, Yu, Kim, Leo J Y, Prager, Briana C, Flavahan, William A, Liu, Xiaojing, Singer, Meromit, Hubert, Christopher G, Miller, Tyler E, Zhou, Wenchao, Huang, Zhi, Fang, Xiaoguang, Regev, Aviv, Suvà, Mario L, Hwang, Tae Hyun, Locasale, Jason W, Bao, Shideng, Rich, Jeremy N
Wydane w Nat Neurosci (2017)

Layilin augments integrin activation to promote antitumor immunity

od Mahuron, Kelly M., Moreau, Joshua M., Glasgow, Jeff E., Boda, Devi P., Pauli, Mariela L., Gouirand, Victoire, Panjabi, Luv, Grewal, Robby, Luber, Jacob M., Mathur, Anubhav N., Feldman, Renny M., Shifrut, Eric, Mehta, Pooja, Lowe, Margaret M., Alvarado, Michael D., Marson, Alexander, Singer, Meromit, Wells, Jim, Jupp, Ray, Daud, Adil I., Rosenblum, Michael D.
Wydane w J Exp Med (2020)

Single-cell analyses identify circulating anti-tumor CD8 T cells and markers for their enrichment

od Pauken, Kristen E., Shahid, Osmaan, Lagattuta, Kaitlyn A., Mahuron, Kelly M., Luber, Jacob M., Lowe, Margaret M., Huang, Linglin, Delaney, Conor, Long, Jaclyn M., Fung, Megan E., Newcomer, Kathleen, Tsai, Katy K., Chow, Melissa, Guinn, Samantha, Kuchroo, Juhi R., Burke, Kelly P., Schenkel, Jason M., Rosenblum, Michael D., Daud, Adil I., Sharpe, Arlene H., Singer, Meromit
Wydane w J Exp Med (2021)