Controlling for conservation in genome-wide DNA methylation studies

Por Singer, Meromit, Pachter, Lior
Publicado no BMC Genomics (2015)

Revolutionizing cancer immunology: the power of next-generation sequencing technologies

Por Singer, Meromit, Anderson, Ana C.
Publicado no Cancer Immunol Res (2019)

Molecular dissection of CD8(+) T cell dysfunction

Por Wang, Chao, Singer, Meromit, Anderson, Ana C.
Publicado no Trends Immunol (2017)

A diverse epigenetic landscape at human exons with implication for expression

Por Singer, Meromit, Kosti, Idit, Pachter, Lior, Mandel-Gutfreund, Yael
Publicado no Nucleic Acids Res (2015)

Identification and correction of systematic error in high-throughput sequence data

Por Meacham, Frazer, Boffelli, Dario, Dhahbi, Joseph, Martin, David IK, Singer, Meromit, Pachter, Lior
Publicado em 2011

MetMap Enables Genome-Scale Methyltyping for Determining Methylation States in Populations

Por Singer, Meromit, Boffelli, Dario, Dhahbi, Joseph, Schönhuth, Alexander, Schroth, Gary P., Martin, David I. K., Pachter, Lior
Publicado em 2010

Combinatorial prediction of marker panels from single‐cell transcriptomic data

Por Delaney, Conor, Schnell, Alexandra, Cammarata, Louis V, Yao‐Smith, Aaron, Regev, Aviv, Kuchroo, Vijay K, Singer, Meromit
Publicado no Mol Syst Biol (2019)

Phyloepigenomic comparison of great apes reveals a correlation between somatic and germline methylation states

Por Martin, David I.K., Singer, Meromit, Dhahbi, Joseph, Mao, Guanxiong, Zhang, Lu, Schroth, Gary P., Pachter, Lior, Boffelli, Dario
Publicado em 2011

A bilateral tumor model identifies transcriptional programs associated with patient response to immune checkpoint blockade

Por Chen, Ivy X., Newcomer, Kathleen, Pauken, Kristen E., Juneja, Vikram R., Naxerova, Kamila, Wu, Michelle W., Pinter, Matthias, Sen, Debattama R., Singer, Meromit, Sharpe, Arlene H., Jain, Rakesh K.
Publicado no Proc Natl Acad Sci U S A (2020)

Circulating clonally expanded T cells reflect functions of tumor-infiltrating T cells

Por Lucca, Liliana E., Axisa, Pierre-Paul, Lu, Benjamin, Harnett, Brian, Jessel, Shlomit, Zhang, Le, Raddassi, Khadir, Zhang, Lin, Olino, Kelly, Clune, James, Singer, Meromit, Kluger, Harriet M., Hafler, David A.
Publicado no J Exp Med (2021)

Blockade of IL-22 signaling reverses erythroid dysfunction in stress-induced anemias

Por Raundhal, Mahesh, Ghosh, Shrestha, Myers, Samuel A., Cuoco, Michael S., Singer, Meromit, Carr, Steven A., Waikar, Sushrut S., Bonventre, Joseph V., Ritz, Jerome, Stone, Richard M., Steensma, David P., Regev, Aviv, Glimcher, Laurie H.
Publicado no Nat Immunol (2021)

Effect of IL-7 therapy on Phospho-ribosomal protein S6 and TRAF1 expression in HIV-specific CD8 T cells in patients receiving antiretroviral therapy(–3)

Por Wang, Chao, Edilova, Maria I., Wagar, Lisa E., Mujib, Shariq, Singer, Meromit, Bernard, Nicole F., Croughs, Thérèse, Lederman, Michael M., Sereti, Irini, Fischl, Margaret A., Kremmer, Elisabeth, Ostrowski, Mario, Routy, Jean-Pierre, Watts, Tania H.
Publicado no J Immunol (2017)

Tim-3 adaptor protein Bat3 is a molecular checkpoint of T cell terminal differentiation and exhaustion

Por Zhu, Chen, Dixon, Karen O., Newcomer, Kathleen, Gu, Guangxiang, Xiao, Sheng, Zaghouani, Sarah, Schramm, Markus A., Wang, Chao, Zhang, Huiyuan, Goto, Kouichiro, Christian, Elena, Rangachari, Manu, Rosenblatt-Rosen, Orit, Okada, Hitoshi, Mak, Tak, Singer, Meromit, Regev, Aviv, Kuchroo, Vijay
Publicado no Sci Adv (2021)

A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells

Por Singer, Meromit, Wang, Chao, Cong, Le, Marjanovic, Nemanja D., Kowalczyk, Monika S., Zhang, Huiyuan, Nyman, Jackson, Sakuishi, Kaori, Kurtulus, Sema, Gennert, David, Xia, Junrong, Kwon, John Y.H., Nevin, James, Herbst, Rebecca H., Yanai, Itai, Rozenblatt-Rosen, Orit, Kuchroo, Vijay K., Regev, Aviv, Anderson, Ana C.
Publicado no Cell (2016)

Endogenous glucocorticoid signaling regulates effector differentiation and development of dysfunction in CD8(+) T cells in the tumor microenvironment

Por Acharya, Nandini, Madi, Asaf, Zhang, Huiyuan, Klapholz, Max, Escobar, Giulia, Dulberg, Shai, Christian, Elena, Ferreira, Michelle, Dixon, Karen O., Fell, Geoffrey, Tooley, Katherine, Mangani, Davide, Xia, Junrong, Singer, Meromit, Bosenberg, Marcus, Neuberg, Donna, Rozenblatt-Rosen, Orit, Regev, Aviv, Kuchroo, Vijay K., Anderson, Ana C.
Publicado no Immunity (2020)

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

Por Chihara, Norio, Madi, Asaf, Kondo, Takaaki, Zhang, Huiyuan, Acharya, Nandini, Singer, Meromit, Nyman, Jackson, Marjanovic, Nemanja D., Kowalczyk, Monika S., Wang, Chao, Kurtulus, Sema, Law, Travis, Etminan, Yasaman, Nevin, James, Buckley, Christopher D., Burkett, Patrick R., Buenrostro, Jason D., Rozenblatt-Rosen, Orit, Anderson, Ana C., Regev, Aviv, Kuchroo, Vijay K.
Publicado no Nature (2018)

Purine synthesis promotes maintenance of brain tumor initiating cells in glioma

Por Wang, Xiuxing, Yang, Kailin, Xie, Qi, Wu, Qiulian, Mack, Stephen C, Shi, Yu, Kim, Leo J Y, Prager, Briana C, Flavahan, William A, Liu, Xiaojing, Singer, Meromit, Hubert, Christopher G, Miller, Tyler E, Zhou, Wenchao, Huang, Zhi, Fang, Xiaoguang, Regev, Aviv, Suvà, Mario L, Hwang, Tae Hyun, Locasale, Jason W, Bao, Shideng, Rich, Jeremy N
Publicado no Nat Neurosci (2017)

Layilin augments integrin activation to promote antitumor immunity

Por Mahuron, Kelly M., Moreau, Joshua M., Glasgow, Jeff E., Boda, Devi P., Pauli, Mariela L., Gouirand, Victoire, Panjabi, Luv, Grewal, Robby, Luber, Jacob M., Mathur, Anubhav N., Feldman, Renny M., Shifrut, Eric, Mehta, Pooja, Lowe, Margaret M., Alvarado, Michael D., Marson, Alexander, Singer, Meromit, Wells, Jim, Jupp, Ray, Daud, Adil I., Rosenblum, Michael D.
Publicado no J Exp Med (2020)

Single-cell analyses identify circulating anti-tumor CD8 T cells and markers for their enrichment

Por Pauken, Kristen E., Shahid, Osmaan, Lagattuta, Kaitlyn A., Mahuron, Kelly M., Luber, Jacob M., Lowe, Margaret M., Huang, Linglin, Delaney, Conor, Long, Jaclyn M., Fung, Megan E., Newcomer, Kathleen, Tsai, Katy K., Chow, Melissa, Guinn, Samantha, Kuchroo, Juhi R., Burke, Kelly P., Schenkel, Jason M., Rosenblum, Michael D., Daud, Adil I., Sharpe, Arlene H., Singer, Meromit
Publicado no J Exp Med (2021)