Scoring Functions for Protein-RNA Complex Structure Prediction: Advances, Applications, and Future Directions

av Qiu, Liming, Zou, Xiaoqin
I publikationen Commun Inf Syst (2020)

Recovery of Oculomotor Nerve Palsy after Endovascular and Surgical Treatment of Posterior Communicating Artery Aneurysms: A Single Institutional Experience

av Mak, Siu Kei David, Qiu, Liming, Ng, Yew Poh
I publikationen Asian J Neurosurg (2018)

Scaling and alpha-helix regulation of protein relaxation in a lipid bilayer

av Qiu, Liming, Buie, Creighton, Cheng, Kwan Hon, Vaughn, Mark W.
I publikationen J Chem Phys (2014)

Journal Watch: our panel of experts highlight the most important research articles across the spectrum of topics relevant to the field of CNS oncology

av Ng, Wai Hoe, Qiu, Liming, Lim, Jia Xu, Primalani, Nishal
I publikationen CNS Oncol (2019)

Lipid Insertion Domain Unfolding Regulates Protein Orientational Transition Behavior in a Lipid Bilayer

av Cheng, Kwan Hon, Qiu, Liming, Cheng, Sara Y., Vaughn, Mark W.
I publikationen Biophys Chem (2015)

Molecular Dynamics Simulations Reveal the Protective Role of Cholesterol in Beta Amyloid Protein-Induced Membrane Disruptions in Neuronal Membrane Mimics

av Qiu, Liming, Buie, Creighton, Reay, Andrew, Vaughn, Mark W., Cheng, Kwan Hon
Publicerad 2011

Performance of MDockPP in CAPRI Rounds 28–29 and 31–35 including the prediction of water-mediated interactions

av Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Ma, Zhiwei, Grinter, Sam Z., Zou, Xiaoqin
I publikationen Proteins (2016)

Identifying the molecular target sites for CFTR potentiators GLPG1837 and VX-770

av Yeh, Han-I, Qiu, Liming, Sohma, Yoshiro, Conrath, Katja, Zou, Xiaoqin, Hwang, Tzyh-Chang
I publikationen J Gen Physiol (2019)

Performance of Human and Server Prediction in CAPRI rounds 38–45

av Duan, Rui, Qiu, Liming, Xu, Xianjin, Ma, Zhiwei, Merideth, Benjamin Ryan, Shyu, Chi-Ren, Zou, Xiaoqin
I publikationen Proteins (2020)

Cholesterol Modulates the Interaction of β-Amyloid Peptide with Lipid Bilayers

av Qiu, Liming, Lewis, Anthony, Como, John, Vaughn, Mark W., Huang, Juyang, Somerharju, Pentti, Virtanen, Jorma, Cheng, Kwan Hon
Publicerad 2009

The Venom of the Ectoparasitoid Wasp Pachycrepoideus vindemiae (Hymenoptera: Pteromalidae) Induces Apoptosis of Drosophila melanogaster Hemocytes

av Wan, Bin, Yang, Lei, Zhang, Jiao, Qiu, Liming, Fang, Qi, Yao, Hongwei, Poirié, Marylène, Gatti, Jean-Luc, Ye, Gongyin
I publikationen Insects (2020)

Functional Characterization of a Venom Protein Calreticulin in the Ectoparasitoid Pachycrepoideus vindemiae

av Yang, Lei, Wang, Beibei, Qiu, Liming, Wan, Bin, Yang, Yi, Liu, Mingming, Wang, Fang, Fang, Qi, Stanley, David W., Ye, Gongyin
I publikationen Insects (2019)

TRIC-A Channel Maintains Store Calcium Handling by Interacting with Type 2 Ryanodine Receptor in Cardiac Muscle

av Zhou, Xinyu, Park, Ki Ho, Yamazaki, Daiju, Lin, Pei-hui, Nishi, Miyuki, Ma, Zhiwei, Qiu, Liming, Murayama, Takashi, Zou, Xiaoqin, Takeshima, Hiroshi, Zhou, Jingsong, Ma, Jianjie
I publikationen Circ Res (2019)

Structural basis of prostate-specific membrane antigen recognition by the A9g RNA aptamer

av Ptacek, Jakub, Zhang, Dong, Qiu, Liming, Kruspe, Sven, Motlova, Lucia, Kolenko, Petr, Novakova, Zora, Shubham, Shambhavi, Havlinova, Barbora, Baranova, Petra, Chen, Shi-Jie, Zou, Xiaoqin, Giangrande, Paloma, Barinka, Cyril
I publikationen Nucleic Acids Res (2020)

The three-way junction structure of the HIV-1 PBS-segment binds host enzyme important for viral infectivity

av Song, Zhenwei, Gremminger, Thomas, Singh, Gatikrushna, Cheng, Yi, Li, Jun, Qiu, Liming, Ji, Juan, Lange, Margaret J, Zuo, Xiaobing, Chen, Shi-Jie, Zou, Xiaoqin, Boris-Lawrie, Kathleen, Heng, Xiao
I publikationen Nucleic Acids Res (2021)

Binding interface and impact on protease cleavage for an RNA aptamer to HIV-1 reverse transcriptase

av Nguyen, Phuong D M, Zheng, Jie, Gremminger, Thomas J, Qiu, Liming, Zhang, Dong, Tuske, Steve, Lange, Margaret J, Griffin, Patrick R, Arnold, Eddy, Chen, Shi-Jie, Zou, Xiaoqin, Heng, Xiao, Burke, Donald H
I publikationen Nucleic Acids Res (2020)

INI1/SMARCB1 Rpt1 domain mimics TAR RNA in binding to integrase to facilitate HIV-1 replication

av Dixit, Updesh, Bhutoria, Savita, Wu, Xuhong, Qiu, Liming, Spira, Menachem, Mathew, Sheeba, Harris, Richard, Adams, Lucas J., Cahill, Sean, Pathak, Rajiv, Rajesh Kumar, P., Nguyen, Minh, Acharya, Seetharama A., Brenowitz, Michael, Almo, Steven C., Zou, Xiaoqin, Steven, Alasdair C., Cowburn, David, Girvin, Mark, Kalpana, Ganjam V.
I publikationen Nat Commun (2021)

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

av Lensink, Marc F., Velankar, Sameer, Kryshtafovych, Andriy, Huang, Shen‐You, Schneidman‐Duhovny, Dina, Sali, Andrej, Segura, Joan, Fernandez‐Fuentes, Narcis, Viswanath, Shruthi, Elber, Ron, Grudinin, Sergei, Popov, Petr, Neveu, Emilie, Lee, Hasup, Baek, Minkyung, Park, Sangwoo, Heo, Lim, Rie Lee, Gyu, Seok, Chaok, Qin, Sanbo, Zhou, Huan‐Xiang, Ritchie, David W., Maigret, Bernard, Devignes, Marie‐Dominique, Ghoorah, Anisah, Torchala, Mieczyslaw, Chaleil, Raphaël A.G., Bates, Paul A., Ben‐Zeev, Efrat, Eisenstein, Miriam, Negi, Surendra S., Weng, Zhiping, Vreven, Thom, Pierce, Brian G., Borrman, Tyler M., Yu, Jinchao, Ochsenbein, Françoise, Guerois, Raphaël, Vangone, Anna, Rodrigues, João P.G.L.M., van Zundert, Gydo, Nellen, Mehdi, Xue, Li, Karaca, Ezgi, Melquiond, Adrien S.J., Visscher, Koen, Kastritis, Panagiotis L., Bonvin, Alexandre M.J.J., Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Li, Jilong, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Shen, Yang, Peterson, Lenna X., Kim, Hyung‐Rae, Roy, Amit, Han, Xusi, Esquivel‐Rodriguez, Juan, Kihara, Daisuke, Yu, Xiaofeng, Bruce, Neil J., Fuller, Jonathan C., Wade, Rebecca C., Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A., Imai, Kenichiro, Yamada, Kazunori, Oda, Toshiyuki, Nakamura, Tsukasa, Tomii, Kentaro, Pallara, Chiara, Romero‐Durana, Miguel, Jiménez‐García, Brian, Moal, Iain H., Férnandez‐Recio, Juan, Joung, Jong Young, Kim, Jong Yun, Joo, Keehyoung, Lee, Jooyoung, Kozakov, Dima, Vajda, Sandor, Mottarella, Scott, Hall, David R., Beglov, Dmitri, Mamonov, Artem, Xia, Bing, Bohnuud, Tanggis, Del Carpio, Carlos A., Ichiishi, Eichiro, Marze, Nicholas, Kuroda, Daisuke, Roy Burman, Shourya S., Gray, Jeffrey J., Chermak, Edrisse, Cavallo, Luigi, Oliva, Romina, Tovchigrechko, Andrey, Wodak, Shoshana J.
I publikationen Proteins (2016)

Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

av Lensink, Marc F., Brysbaert, Guillaume, Nadzirin, Nurul, Velankar, Sameer, Chaleil, Raphaël A. G., Gerguri, Tereza, Bates, Paul A., Laine, Elodie, Carbone, Alessandra, Grudinin, Sergei, Kong, Ren, Liu, Ran-Ran, Xu, Xi-Ming, Shi, Hang, Chang, Shan, Eisenstein, Miriam, Karczynska, Agnieszka, Czaplewski, Cezary, Lubecka, Emilia, Lipska, Agnieszka, Krupa, Paweł, Mozolewska, Magdalena, Golon, Łukasz, Samsonov, Sergey, Liwo, Adam, Crivelli, Silvia, Pagès, Guillaume, Karasikov, Mikhail, Kadukova, Maria, Yan, Yumeng, Huang, Sheng-You, Rosell, Mireia, Rodríguez-Lumbreras, Luis A., Romero-Durana, Miguel, Díaz-Bueno, Lucía, Fernandez-Recio, Juan, Christoffer, Charles, Terashi, Genki, Shin, Woong-Hee, Aderinwale, Tunde, Subraman, Sai Raghavendra Maddhuri Venkata, Kihara, Daisuke, Kozakov, Dima, Vajda, Sandor, Porter, Kathryn, Padhorny, Dzmitry, Desta, Israel, Beglov, Dmitri, Ignatov, Mikhail, Kotelnikov, Sergey, Moal, Iain H., Ritchie, David W., de Beauchêne, Isaure Chauvot, Maigret, Bernard, Devignes, Marie-Dominique, Echartea, Maria E. Ruiz, Barradas-Bautista, Didier, Cao, Zhen, Cavallo, Luigi, Oliva, Romina, Cao, Yue, Shen, Yang, Baek, Minkyung, Park, Taeyong, Woo, Hyeonuk, Seok, Chaok, Braitbard, Merav, Bitton, Lirane, Scheidman-Duhovny, Dina, Dapkūnas, Justas, Olechnovič, Kliment, Venclovas, Česlovas, Kundrotas, Petras J., Belkin, Saveliy, Chakravarty, Devlina, Badal, Varsha D., Vakser, Ilya A., Vreven, Thom, Vangaveti, Sweta, Borrman, Tyler, Weng, Zhiping, Guest, Johnathan D., Gowthaman, Ragul, Pierce, Brian G., Xu, Xianjin, Duan, Rui, Qiu, Liming, Hou, Jie, Merideth, Benjamin Ryan, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Koukos, Panagiotis I., Roel-Touris, Jorge, Ambrosetti, Francesco, Geng, Cunliang, Schaarschmidt, Jörg, Trellet, Mikael E., Melquiond, Adrien S. J., Xue, Li, Jiménez-García, Brian, van Noort, Charlotte W., Honorato, Rodrigo V., Bonvin, Alexandre M. J. J., Wodak, Shoshana J.
I publikationen Proteins (2019)