Scoring Functions for Protein-RNA Complex Structure Prediction: Advances, Applications, and Future Directions

অনুযায়ী Qiu, Liming, Zou, Xiaoqin
প্রকাশিত Commun Inf Syst (2020)

Recovery of Oculomotor Nerve Palsy after Endovascular and Surgical Treatment of Posterior Communicating Artery Aneurysms: A Single Institutional Experience

অনুযায়ী Mak, Siu Kei David, Qiu, Liming, Ng, Yew Poh
প্রকাশিত Asian J Neurosurg (2018)

Scaling and alpha-helix regulation of protein relaxation in a lipid bilayer

অনুযায়ী Qiu, Liming, Buie, Creighton, Cheng, Kwan Hon, Vaughn, Mark W.
প্রকাশিত J Chem Phys (2014)

Journal Watch: our panel of experts highlight the most important research articles across the spectrum of topics relevant to the field of CNS oncology

অনুযায়ী Ng, Wai Hoe, Qiu, Liming, Lim, Jia Xu, Primalani, Nishal
প্রকাশিত CNS Oncol (2019)

Lipid Insertion Domain Unfolding Regulates Protein Orientational Transition Behavior in a Lipid Bilayer

অনুযায়ী Cheng, Kwan Hon, Qiu, Liming, Cheng, Sara Y., Vaughn, Mark W.
প্রকাশিত Biophys Chem (2015)

Molecular Dynamics Simulations Reveal the Protective Role of Cholesterol in Beta Amyloid Protein-Induced Membrane Disruptions in Neuronal Membrane Mimics

অনুযায়ী Qiu, Liming, Buie, Creighton, Reay, Andrew, Vaughn, Mark W., Cheng, Kwan Hon
প্রকাশিত 2011

Performance of MDockPP in CAPRI Rounds 28–29 and 31–35 including the prediction of water-mediated interactions

অনুযায়ী Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Ma, Zhiwei, Grinter, Sam Z., Zou, Xiaoqin
প্রকাশিত Proteins (2016)

Identifying the molecular target sites for CFTR potentiators GLPG1837 and VX-770

অনুযায়ী Yeh, Han-I, Qiu, Liming, Sohma, Yoshiro, Conrath, Katja, Zou, Xiaoqin, Hwang, Tzyh-Chang
প্রকাশিত J Gen Physiol (2019)

Performance of Human and Server Prediction in CAPRI rounds 38–45

অনুযায়ী Duan, Rui, Qiu, Liming, Xu, Xianjin, Ma, Zhiwei, Merideth, Benjamin Ryan, Shyu, Chi-Ren, Zou, Xiaoqin
প্রকাশিত Proteins (2020)

Cholesterol Modulates the Interaction of β-Amyloid Peptide with Lipid Bilayers

অনুযায়ী Qiu, Liming, Lewis, Anthony, Como, John, Vaughn, Mark W., Huang, Juyang, Somerharju, Pentti, Virtanen, Jorma, Cheng, Kwan Hon
প্রকাশিত 2009

The Venom of the Ectoparasitoid Wasp Pachycrepoideus vindemiae (Hymenoptera: Pteromalidae) Induces Apoptosis of Drosophila melanogaster Hemocytes

অনুযায়ী Wan, Bin, Yang, Lei, Zhang, Jiao, Qiu, Liming, Fang, Qi, Yao, Hongwei, Poirié, Marylène, Gatti, Jean-Luc, Ye, Gongyin
প্রকাশিত Insects (2020)

Functional Characterization of a Venom Protein Calreticulin in the Ectoparasitoid Pachycrepoideus vindemiae

অনুযায়ী Yang, Lei, Wang, Beibei, Qiu, Liming, Wan, Bin, Yang, Yi, Liu, Mingming, Wang, Fang, Fang, Qi, Stanley, David W., Ye, Gongyin
প্রকাশিত Insects (2019)

TRIC-A Channel Maintains Store Calcium Handling by Interacting with Type 2 Ryanodine Receptor in Cardiac Muscle

অনুযায়ী Zhou, Xinyu, Park, Ki Ho, Yamazaki, Daiju, Lin, Pei-hui, Nishi, Miyuki, Ma, Zhiwei, Qiu, Liming, Murayama, Takashi, Zou, Xiaoqin, Takeshima, Hiroshi, Zhou, Jingsong, Ma, Jianjie
প্রকাশিত Circ Res (2019)

Structural basis of prostate-specific membrane antigen recognition by the A9g RNA aptamer

অনুযায়ী Ptacek, Jakub, Zhang, Dong, Qiu, Liming, Kruspe, Sven, Motlova, Lucia, Kolenko, Petr, Novakova, Zora, Shubham, Shambhavi, Havlinova, Barbora, Baranova, Petra, Chen, Shi-Jie, Zou, Xiaoqin, Giangrande, Paloma, Barinka, Cyril
প্রকাশিত Nucleic Acids Res (2020)

The three-way junction structure of the HIV-1 PBS-segment binds host enzyme important for viral infectivity

অনুযায়ী Song, Zhenwei, Gremminger, Thomas, Singh, Gatikrushna, Cheng, Yi, Li, Jun, Qiu, Liming, Ji, Juan, Lange, Margaret J, Zuo, Xiaobing, Chen, Shi-Jie, Zou, Xiaoqin, Boris-Lawrie, Kathleen, Heng, Xiao
প্রকাশিত Nucleic Acids Res (2021)

Binding interface and impact on protease cleavage for an RNA aptamer to HIV-1 reverse transcriptase

অনুযায়ী Nguyen, Phuong D M, Zheng, Jie, Gremminger, Thomas J, Qiu, Liming, Zhang, Dong, Tuske, Steve, Lange, Margaret J, Griffin, Patrick R, Arnold, Eddy, Chen, Shi-Jie, Zou, Xiaoqin, Heng, Xiao, Burke, Donald H
প্রকাশিত Nucleic Acids Res (2020)

INI1/SMARCB1 Rpt1 domain mimics TAR RNA in binding to integrase to facilitate HIV-1 replication

অনুযায়ী Dixit, Updesh, Bhutoria, Savita, Wu, Xuhong, Qiu, Liming, Spira, Menachem, Mathew, Sheeba, Harris, Richard, Adams, Lucas J., Cahill, Sean, Pathak, Rajiv, Rajesh Kumar, P., Nguyen, Minh, Acharya, Seetharama A., Brenowitz, Michael, Almo, Steven C., Zou, Xiaoqin, Steven, Alasdair C., Cowburn, David, Girvin, Mark, Kalpana, Ganjam V.
প্রকাশিত Nat Commun (2021)

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

অনুযায়ী Lensink, Marc F., Velankar, Sameer, Kryshtafovych, Andriy, Huang, Shen‐You, Schneidman‐Duhovny, Dina, Sali, Andrej, Segura, Joan, Fernandez‐Fuentes, Narcis, Viswanath, Shruthi, Elber, Ron, Grudinin, Sergei, Popov, Petr, Neveu, Emilie, Lee, Hasup, Baek, Minkyung, Park, Sangwoo, Heo, Lim, Rie Lee, Gyu, Seok, Chaok, Qin, Sanbo, Zhou, Huan‐Xiang, Ritchie, David W., Maigret, Bernard, Devignes, Marie‐Dominique, Ghoorah, Anisah, Torchala, Mieczyslaw, Chaleil, Raphaël A.G., Bates, Paul A., Ben‐Zeev, Efrat, Eisenstein, Miriam, Negi, Surendra S., Weng, Zhiping, Vreven, Thom, Pierce, Brian G., Borrman, Tyler M., Yu, Jinchao, Ochsenbein, Françoise, Guerois, Raphaël, Vangone, Anna, Rodrigues, João P.G.L.M., van Zundert, Gydo, Nellen, Mehdi, Xue, Li, Karaca, Ezgi, Melquiond, Adrien S.J., Visscher, Koen, Kastritis, Panagiotis L., Bonvin, Alexandre M.J.J., Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Li, Jilong, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Shen, Yang, Peterson, Lenna X., Kim, Hyung‐Rae, Roy, Amit, Han, Xusi, Esquivel‐Rodriguez, Juan, Kihara, Daisuke, Yu, Xiaofeng, Bruce, Neil J., Fuller, Jonathan C., Wade, Rebecca C., Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A., Imai, Kenichiro, Yamada, Kazunori, Oda, Toshiyuki, Nakamura, Tsukasa, Tomii, Kentaro, Pallara, Chiara, Romero‐Durana, Miguel, Jiménez‐García, Brian, Moal, Iain H., Férnandez‐Recio, Juan, Joung, Jong Young, Kim, Jong Yun, Joo, Keehyoung, Lee, Jooyoung, Kozakov, Dima, Vajda, Sandor, Mottarella, Scott, Hall, David R., Beglov, Dmitri, Mamonov, Artem, Xia, Bing, Bohnuud, Tanggis, Del Carpio, Carlos A., Ichiishi, Eichiro, Marze, Nicholas, Kuroda, Daisuke, Roy Burman, Shourya S., Gray, Jeffrey J., Chermak, Edrisse, Cavallo, Luigi, Oliva, Romina, Tovchigrechko, Andrey, Wodak, Shoshana J.
প্রকাশিত Proteins (2016)

Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

অনুযায়ী Lensink, Marc F., Brysbaert, Guillaume, Nadzirin, Nurul, Velankar, Sameer, Chaleil, Raphaël A. G., Gerguri, Tereza, Bates, Paul A., Laine, Elodie, Carbone, Alessandra, Grudinin, Sergei, Kong, Ren, Liu, Ran-Ran, Xu, Xi-Ming, Shi, Hang, Chang, Shan, Eisenstein, Miriam, Karczynska, Agnieszka, Czaplewski, Cezary, Lubecka, Emilia, Lipska, Agnieszka, Krupa, Paweł, Mozolewska, Magdalena, Golon, Łukasz, Samsonov, Sergey, Liwo, Adam, Crivelli, Silvia, Pagès, Guillaume, Karasikov, Mikhail, Kadukova, Maria, Yan, Yumeng, Huang, Sheng-You, Rosell, Mireia, Rodríguez-Lumbreras, Luis A., Romero-Durana, Miguel, Díaz-Bueno, Lucía, Fernandez-Recio, Juan, Christoffer, Charles, Terashi, Genki, Shin, Woong-Hee, Aderinwale, Tunde, Subraman, Sai Raghavendra Maddhuri Venkata, Kihara, Daisuke, Kozakov, Dima, Vajda, Sandor, Porter, Kathryn, Padhorny, Dzmitry, Desta, Israel, Beglov, Dmitri, Ignatov, Mikhail, Kotelnikov, Sergey, Moal, Iain H., Ritchie, David W., de Beauchêne, Isaure Chauvot, Maigret, Bernard, Devignes, Marie-Dominique, Echartea, Maria E. Ruiz, Barradas-Bautista, Didier, Cao, Zhen, Cavallo, Luigi, Oliva, Romina, Cao, Yue, Shen, Yang, Baek, Minkyung, Park, Taeyong, Woo, Hyeonuk, Seok, Chaok, Braitbard, Merav, Bitton, Lirane, Scheidman-Duhovny, Dina, Dapkūnas, Justas, Olechnovič, Kliment, Venclovas, Česlovas, Kundrotas, Petras J., Belkin, Saveliy, Chakravarty, Devlina, Badal, Varsha D., Vakser, Ilya A., Vreven, Thom, Vangaveti, Sweta, Borrman, Tyler, Weng, Zhiping, Guest, Johnathan D., Gowthaman, Ragul, Pierce, Brian G., Xu, Xianjin, Duan, Rui, Qiu, Liming, Hou, Jie, Merideth, Benjamin Ryan, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Koukos, Panagiotis I., Roel-Touris, Jorge, Ambrosetti, Francesco, Geng, Cunliang, Schaarschmidt, Jörg, Trellet, Mikael E., Melquiond, Adrien S. J., Xue, Li, Jiménez-García, Brian, van Noort, Charlotte W., Honorato, Rodrigo V., Bonvin, Alexandre M. J. J., Wodak, Shoshana J.
প্রকাশিত Proteins (2019)