E2 superfamily of ubiquitin-conjugating enzymes: constitutively active or activated through phosphorylation in the catalytic cleft

Por Valimberti, Ilaria, Tiberti, Matteo, Lambrughi, Matteo, Sarcevic, Boris, Papaleo, Elena
Publicado no Sci Rep (2015)

An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass

Por Salamanca Viloria, Juan, Allega, Maria Francesca, Lambrughi, Matteo, Papaleo, Elena
Publicado no Sci Rep (2017)

Communication Routes in ARID Domains between Distal Residues in Helix 5 and the DNA-Binding Loops

Por Invernizzi, Gaetano, Tiberti, Matteo, Lambrughi, Matteo, Lindorff-Larsen, Kresten, Papaleo, Elena
Publicado em 2014

Alterations of the interactome of Bcl-2 proteins in breast cancer at the transcriptional, mutational and structural level

Por Kønig, Simon Mathis, Rissler, Vendela, Terkelsen, Thilde, Lambrughi, Matteo, Papaleo, Elena
Publicado no PLoS Comput Biol (2019)

Structure and Dynamics in the ATG8 Family From Experimental to Computational Techniques

Por Sora, Valentina, Kumar, Mukesh, Maiani, Emiliano, Lambrughi, Matteo, Tiberti, Matteo, Papaleo, Elena
Publicado no Front Cell Dev Biol (2020)

Intramolecular interactions stabilizing compact conformations of the intrinsically disordered kinase-inhibitor domain of Sic1: a molecular dynamics investigation

Por Lambrughi, Matteo, Papaleo, Elena, Testa, Lorenzo, Brocca, Stefania, De Gioia, Luca, Grandori, Rita
Publicado em 2012

A comparative study of Whi5 and retinoblastoma proteins: from sequence and structure analysis to intracellular networks

Por Hasan, Md Mehedi, Brocca, Stefania, Sacco, Elena, Spinelli, Michela, Papaleo, Elena, Lambrughi, Matteo, Alberghina, Lilia, Vanoni, Marco
Publicado em 2014

DNA-binding protects p53 from interactions with cofactors involved in transcription-independent functions

Por Lambrughi, Matteo, De Gioia, Luca, Gervasio, Francesco Luigi, Lindorff-Larsen, Kresten, Nussinov, Ruth, Urani, Chiara, Bruschi, Maurizio, Papaleo, Elena
Publicado no Nucleic Acids Res (2016)

Structure-function investigation of 3-methylaspartate ammonia lyase reveals substrate molecular determinants for the deamination reaction

Por Saez-Jimenez, Veronica, Maršić, Željka Sanader, Lambrughi, Matteo, Shin, Jae Ho, van Havere, Robin, Papaleo, Elena, Olsson, Lisbeth, Mapelli, Valeria
Publicado no PLoS One (2020)

The Mutational Landscape of the Oncogenic MZF1 SCAN Domain in Cancer

Por Nygaard, Mads, Terkelsen, Thilde, Vidas Olsen, André, Sora, Valentina, Salamanca Viloria, Juan, Rizza, Fabio, Bergstrand-Poulsen, Sanne, Di Marco, Miriam, Vistesen, Mette, Tiberti, Matteo, Lambrughi, Matteo, Jäättelä, Marja, Kallunki, Tuula, Papaleo, Elena
Publicado no Front Mol Biosci (2016)

Release of transcriptional repression via ErbB2-induced, SUMO-directed phosphorylation of Myeloid Zinc Finger-1 Serine 27 activates lysosome redistribution and invasion

Por Brix, Ditte Marie, Tvingsholm, Siri Amanda, Hansen, Malene Bredahl, Clemmensen, Knut Bundgaard, Ohman, Tiina, Siino, Valentina, Lambrughi, Matteo, Hansen, Klaus, Puustinen, Pietri, Gromova, Irina, James, Peter, Papaleo, Elena, Varjosalo, Markku, Moreira, José, Jäättelä, Marja, Kallunki, Tuula
Publicado no Oncogene (2019)

HUWE1 E3 ligase promotes PINK1/PARKIN-independent mitophagy by regulating AMBRA1 activation via IKKα

Por Di Rita, Anthea, Peschiaroli, Angelo, D′Acunzo, Pasquale, Strobbe, Daniela, Hu, Zehan, Gruber, Jens, Nygaard, Mads, Lambrughi, Matteo, Melino, Gerry, Papaleo, Elena, Dengjel, Jörn, El Alaoui, Said, Campanella, Michelangelo, Dötsch, Volker, Rogov, Vladimir V., Strappazzon, Flavie, Cecconi, Francesco
Publicado no Nat Commun (2018)

Bi-allelic mutations in MYL1 cause a severe congenital myopathy

Por Ravenscroft, Gianina, Zaharieva, Irina T, Bortolotti, Carlo A, Lambrughi, Matteo, Pignataro, Marcello, Borsari, Marco, Sewry, Caroline A, Phadke, Rahul, Haliloglu, Goknur, Ong, Royston, Goullée, Hayley, Whyte, Tamieka, Consortium, UK10K, Manzur, Adnan, Talim, Beril, Kaya, Ulkuhan, Osborn, Daniel P S, Forrest, Alistair R R, Laing, Nigel G, Muntoni, Francesco
Publicado no Hum Mol Genet (2018)

Selective autophagy maintains centrosome integrity and accurate mitosis by turnover of centriolar satellites

Por Holdgaard, Søs Grønbæk, Cianfanelli, Valentina, Pupo, Emanuela, Lambrughi, Matteo, Lubas, Michal, Nielsen, Julie C., Eibes, Susana, Maiani, Emiliano, Harder, Lea M., Wesch, Nicole, Foged, Mads Møller, Maeda, Kenji, Nazio, Francesca, de la Ballina, Laura R., Dötsch, Volker, Brech, Andreas, Frankel, Lisa B., Jäättelä, Marja, Locatelli, Franco, Barisic, Marin, Andersen, Jens S., Bekker-Jensen, Simon, Lund, Anders H., Rogov, Vladimir V., Papaleo, Elena, Lanzetti, Letizia, De Zio, Daniela, Cecconi, Francesco
Publicado no Nat Commun (2019)

Myoglobinopathy is an adult-onset autosomal dominant myopathy with characteristic sarcoplasmic inclusions

Por Olivé, Montse, Engvall, Martin, Ravenscroft, Gianina, Cabrera-Serrano, Macarena, Jiao, Hong, Bortolotti, Carlo Augusto, Pignataro, Marcello, Lambrughi, Matteo, Jiang, Haibo, Forrest, Alistair R. R., Benseny-Cases, Núria, Hofbauer, Stefan, Obinger, Christian, Battistuzzi, Gianantonio, Bellei, Marzia, Borsari, Marco, Di Rocco, Giulia, Viola, Helena M., Hool, Livia C., Cladera, Josep, Lagerstedt-Robinson, Kristina, Xiang, Fengqing, Wredenberg, Anna, Miralles, Francesc, Baiges, Juan José, Malfatti, Edoardo, Romero, Norma B., Streichenberger, Nathalie, Vial, Christophe, Claeys, Kristl G., Straathof, Chiara S. M., Goris, An, Freyer, Christoph, Lammens, Martin, Bassez, Guillaume, Kere, Juha, Clemente, Paula, Sejersen, Thomas, Udd, Bjarne, Vidal, Noemí, Ferrer, Isidre, Edström, Lars, Wedell, Anna, Laing, Nigel G.
Publicado no Nat Commun (2019)

DisProt: intrinsic protein disorder annotation in 2020

Por Hatos, András, Hajdu-Soltész, Borbála, Monzon, Alexander M, Palopoli, Nicolas, Álvarez, Lucía, Aykac-Fas, Burcu, Bassot, Claudio, Benítez, Guillermo I, Bevilacqua, Martina, Chasapi, Anastasia, Chemes, Lucia, Davey, Norman E, Davidović, Radoslav, Dunker, A Keith, Elofsson, Arne, Gobeill, Julien, Foutel, Nicolás S González, Sudha, Govindarajan, Guharoy, Mainak, Horvath, Tamas, Iglesias, Valentin, Kajava, Andrey V, Kovacs, Orsolya P, Lamb, John, Lambrughi, Matteo, Lazar, Tamas, Leclercq, Jeremy Y, Leonardi, Emanuela, Macedo-Ribeiro, Sandra, Macossay-Castillo, Mauricio, Maiani, Emiliano, Manso, José A, Marino-Buslje, Cristina, Martínez-Pérez, Elizabeth, Mészáros, Bálint, Mičetić, Ivan, Minervini, Giovanni, Murvai, Nikoletta, Necci, Marco, Ouzounis, Christos A, Pajkos, Mátyás, Paladin, Lisanna, Pancsa, Rita, Papaleo, Elena, Parisi, Gustavo, Pasche, Emilie, Barbosa Pereira, Pedro J, Promponas, Vasilis J, Pujols, Jordi, Quaglia, Federica, Ruch, Patrick, Salvatore, Marco, Schad, Eva, Szabo, Beata, Szaniszló, Tamás, Tamana, Stella, Tantos, Agnes, Veljkovic, Nevena, Ventura, Salvador, Vranken, Wim, Dosztányi, Zsuzsanna, Tompa, Peter, Tosatto, Silvio C E, Piovesan, Damiano
Publicado no Nucleic Acids Res (2020)