taveRNA: a web suite for RNA algorithms and applications

od Aksay, Cagri, Salari, Raheleh, Karakoc, Emre, Alkan, Can, Sahinalp, S. Cenk
Wydane 2007

PICKY: a novel SVD-based NMR spectra peak picking method

od Alipanahi, Babak, Gao, Xin, Karakoc, Emre, Donaldson, Logan, Li, Ming
Wydane 2009

Population size changes and selection drive patterns of parallel evolution in a host–virus system

od Frickel, Jens, Feulner, Philine G. D., Karakoc, Emre, Becks, Lutz
Wydane w Nat Commun (2018)

The Evolution and Functional Impact of Human Deletion Variants Shared with Archaic Hominin Genomes

od Lin, Yen-Lung, Pavlidis, Pavlos, Karakoc, Emre, Ajay, Jerry, Gokcumen, Omer
Wydane w Mol Biol Evol (2015)

smyRNA: A Novel Ab Initio ncRNA Gene Finder

od Salari, Raheleh, Aksay, Cagri, Karakoc, Emre, Unrau, Peter J., Hajirasouliha, Iman, Sahinalp, S. Cenk
Wydane 2009

Prognostic Factors Determining Morbidity and Mortality in Organophosphate Poisoning

od Acikalin, Ayca, Dişel, Nezihat Rana, Matyar, Selcuk, Sebe, Ahmet, Kekec, Zeynep, Gokel, Yuksel, Karakoc, Emre
Wydane w Pak J Med Sci (2017)

Integrating personalized genomics into Turkish healthcare system: A cancer-oriented pilot activity of Istanbul Northern Anatolian Public Hospitals with GLAB

od Doganay, Levent, Ozdil, Kamil, Memisoglu, Kemal, Katrinli, Seyma, Karakoc, Emre, Nikerel, Emrah, Doganay, Gizem Dinler
Wydane w North Clin Istanb (2017)

Ultrastructural changes in rat thyroid tissue after acute organophosphate poisoning and effects of antidotal therapy with atropine and pralidoxime: A single-blind, ex vivo study

od Satar, Deniz, Satar, Salim, Mete, Ufuk Ozgu, Suchard, Jeffrey R., Topal, Metin, Karakoc, Emre, Kaya, Mehmet
Wydane 2008

Effects of oral/enteral nutrition alone versus plus pantoprazole on gastrointestinal bleeding in critically ill patients with low risk factor: a multicenter, randomized controlled...

od GÜNDOĞAN, Kürşat, KARAKOÇ, Emre, TEKE, Turgut, ZERMAN, Avşar, ESMAOĞLU, Aliye, TEMEL, Şahin, GÜVEN, Muhammet, SUNGUR, Murat
Wydane w Turk J Med Sci (2020)

Detection of structural variants and indels within exome data

od Karakoc, Emre, Alkan, Can, O’Roak, Brian J., Dennis, Megan, Vives, Laura, Mark, Kenneth, Rieder, Mark J., Nickerson, Debbie A., Eichler, Evan E.
Wydane 2011

Transmission Disequilibrium of Small CNVs in Simplex Autism

od Krumm, Niklas, O’Roak, Brian J., Karakoc, Emre, Mohajeri, Kiana, Nelson, Ben, Vives, Laura, Jacquemont, Sebastien, Munson, Jeff, Bernier, Raphe, Eichler, Evan E.
Wydane 2013

Integrated cross-study datasets of genetic dependencies in cancer

od Pacini, Clare, Dempster, Joshua M., Boyle, Isabella, Gonçalves, Emanuel, Najgebauer, Hanna, Karakoc, Emre, van der Meer, Dieudonne, Barthorpe, Andrew, Lightfoot, Howard, Jaaks, Patricia, McFarland, James M., Garnett, Mathew J., Tsherniak, Aviad, Iorio, Francesco
Wydane w Nat Commun (2021)

Genomic resources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus

od Harr, Bettina, Karakoc, Emre, Neme, Rafik, Teschke, Meike, Pfeifle, Christine, Pezer, Željka, Babiker, Hiba, Linnenbrink, Miriam, Montero, Inka, Scavetta, Rick, Abai, Mohammad Reza, Molins, Marta Puente, Schlegel, Mathias, Ulrich, Rainer G., Altmüller, Janine, Franitza, Marek, Büntge, Anna, Künzel, Sven, Tautz, Diethard
Wydane w Sci Data (2016)

Modified Lung Ultrasound Score in Evaluating the Severity of Covid-19 Pneumonia

od Sumbul, Hilmi Erdem, Koc, Ayse Selcan, Pınar, Arzu, Aslan, Muhammed Zubeyir, Gulumsek, Erdinc, Koca, Hasan, Bulut, Yurdaer, Karakoc, Emre, Turunc, Tuba, Bayrak, Edip, Ozturk, Huseyin Ali, Avci, Akkan, Unal, Ilker, Icen, Yahya Kemal, Koc, Mevlut, Sahin, Ahmet Riza, Okyay, Ramazan Azim
Wydane w Ultrasound Med Biol (2021)

Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations

od O’Roak, Brian J., Deriziotis, Pelagia, Lee, Choli, Vives, Laura, Schwartz, Jerrod J., Girirajan, Santhosh, Karakoc, Emre, MacKenzie, Alexandra P., Ng, Sarah B., Baker, Carl, Rieder, Mark J., Nickerson, Deborah A., Bernier, Raphael, Fisher, Simon E., Shendure, Jay, Eichler, Evan E.
Wydane 2011

Altered splicing of ATP6AP2 causes X-linked parkinsonism with spasticity (XPDS)

od Korvatska, Olena, Strand, Nicholas S., Berndt, Jason D., Strovas, Tim, Chen, Dong-Hui, Leverenz, James B., Kiianitsa, Konstantin, Mata, Ignacio F., Karakoc, Emre, Greenup, J. Lynne, Bonkowski, Emily, Chuang, Joseph, Moon, Randall T., Eichler, Evan E., Nickerson, Deborah A., Zabetian, Cyrus P., Kraemer, Brian C., Bird, Thomas D., Raskind, Wendy H.
Wydane 2013

Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations

od O’Roak, Brian J., Vives, Laura, Girirajan, Santhosh, Karakoc, Emre, Krumm, Nik, Coe, Bradley P., Levy, Roie, Ko, Arthur, Lee, Choli, Smith, Joshua D., Turner, Emily H., Stanaway, Ian B., Vernot, Benjamin, Malig, Maika, Baker, Carl, Reilly, Beau, Akey, Joshua M., Borenstein, Elhanan, Rieder, Mark J., Nickerson, Deborah A., Bernier, Raphael, Shendure, Jay, Eichler, Evan E.
Wydane 2012

The bonobo genome compared with the chimpanzee and human genomes

od Prüfer, Kay, Munch, Kasper, Hellmann, Ines, Akagi, Keiko, Miller, Jason R., Walenz, Brian, Koren, Sergey, Sutton, Granger, Kodira, Chinnappa, Winer, Roger, Knight, James R., Mullikin, James C., Meader, Stephen J., Ponting, Chris P., Lunter, Gerton, Higashino, Saneyuki, Hobolth, Asger, Dutheil, Julien, Karakoç, Emre, Alkan, Can, Sajjadian, Saba, Catacchio, Claudia Rita, Ventura, Mario, Marques-Bonet, Tomas, Eichler, Evan E., André, Claudine, Atencia, Rebeca, Mugisha, Lawrence, Junhold, Jörg, Patterson, Nick, Siebauer, Michael, Good, Jeffrey M., Fischer, Anne, Ptak, Susan E., Lachmann, Michael, Symer, David E., Mailund, Thomas, Schierup, Mikkel H., Andrés, Aida M., Kelso, Janet, Pääbo, Svante
Wydane 2012

Insights into hominid evolution from the gorilla genome sequence

od Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Greg E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Wydane 2012

Current Statement of Intensive Care Units in Turkey: Data obtained from 67 Centers

od Ediboğlu, Özlem, Moçin, Özlem Yazıcıoğlu, Özyılmaz, Ezgi, Saltürk, Cüneyt, Önalan, Tuğba, Seydaoğlu, Gülşah, Çelikel, Turgay, Arıkan, Hüseyin, Ataman, Sena, Kıraklı, Cenk, Özçelik, Zerrin, Kultufan, Sema, Kara, İskender, Kara, Atilla, Dağlı, Emine, Bülbül, Selma Duru, Kahveci, Kadriye, Dinçer, Metin, Şenoğlu, Nimet, Özkarakaş, Hüseyin, Bahar, İlhan, Cengiz, Melike, Ramazanoğlu, Atilla, Çelik, Burcu, Gaygısız, Ümmügülsün, Kır, Gülay, Bindal, Ahmet, Akan, Belgin, Turan, Işıl Özkoçak, Yıldırım, Fatma, Başarık, Burcu, Ulukan, Zeliha Arslan, Efe, Serdar, Sungur, Murat, Temel, Şahin, İzdeş, Seval, Hoşgün, Derya, Karadeniz, Nurhan, Tuncay, Eylem, Gökşenoğlu, Nezihe Çiftarslan, Irmak, İlim, Datlı, Utku, Zerman, Avşar, Akdağ, Devrim, Özdemir, Levent, Elay, Gülseren, Karaçayır, Yücel, Topeli, Arzu, Hancı, Pervin, Kaya, Esat Kıvanç, Güven, Pınar, Sazak, Hilal, Aydemir, Semih, Aygencel, Gülbin, Aydemir, Yusuf, Doğanay, Zahide, Kömürcü, Özgür, Hancı, Volkan, Karakoç, Emre, Sözütek, Didem, Coşkun, Güven, Ateş, Güngör, Tiryaki, Civan, Soytürk, Ayşe Nur, Girgin, Nermin Kelebek, Çalışkan, Gülbahar, Bıyıklı, Oben, Gökmen, Necati, Koca, Uğur, Çiledağ, Aydın, Süner, Kezban Özmen, Cinel, İsmail, Arslantaş, Mustafa Kemal, Gül, Fethi, Ergün, Recai, Yılmaz, Nafiye, Altıntaş, Defne, Talan, Leyla, Yalçınsoy, Murat, Güllü, Mehmet Nezir, Özcan, Perihan Ergin, Orhun, Günseli, Savran, Yusuf, Tokur, Murat Emre, Akpınar, Serdar, Şen, Pelin, Gürsel, Gül, Şerifoğlu, İrem, Gedik, Ender, Balbay, Öner Abidin, Akbaş, Türkay, Cesur, Sinem, Yolacan, Hülya, Sağmen, Seda Beyhan, Ekren, Pervin Korkmaz, Bacakoğlu, Feza, Ergan, Begüm, Günay, Ersin, Sarıaydın, Muzaffer, Sağlam, Dursun Ali, Karakurt, Sait, Eryüksel, Emel, Öztuna, Funda, Mürtezaoğlu, Emine Sevil Ayaydın, Cinemre, Hakan, Nalbant, Ahmet, Yağmurkaya, Öznur, Mandal, Tuğba, İkidağ, Belgin
Wydane w Turk Thorac J (2018)