HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R

Por Dvinge, Heidi, Bertone, Paul
Publicado em 2009

Widespread intron retention diversifies most cancer transcriptomes

Por Dvinge, Heidi, Bradley, Robert K.
Publicado no Genome Med (2015)

PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci

Por Salmon-Divon, Mali, Dvinge, Heidi, Tammoja, Kairi, Bertone, Paul
Publicado em 2010

RNA splicing factors as oncoproteins and tumor suppressors

Por Dvinge, Heidi, Kim, Eunhee, Abdel-Wahab, Omar, Bradley, Robert K.
Publicado no Nat Rev Cancer (2016)

RNA components of the spliceosome regulate tissue- and cancer-specific alternative splicing

Por Dvinge, Heidi, Guenthoer, Jamie, Porter, Peggy L., Bradley, Robert K.
Publicado no Genome Res (2019)

Sample processing obscures cancer-specific alterations in leukemic transcriptomes

Por Dvinge, Heidi, Ries, Rhonda E., Ilagan, Janine O., Stirewalt, Derek L., Meshinchi, Soheil, Bradley, Robert K.
Publicado no Proc Natl Acad Sci U S A (2014)

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

Por Git, Anna, Dvinge, Heidi, Salmon-Divon, Mali, Osborne, Michelle, Kutter, Claudia, Hadfield, James, Bertone, Paul, Caldas, Carlos
Publicado em 2010

NuRD-mediated deacetylation of H3K27 facilitates recruitment of Polycomb Repressive Complex 2 to direct gene repression

Por Reynolds, Nicola, Salmon-Divon, Mali, Dvinge, Heidi, Hynes-Allen, Antony, Balasooriya, Gayan, Leaford, Donna, Behrens, Axel, Bertone, Paul, Hendrich, Brian
Publicado em 2012

Genome-wide characterization of Foxa2 targets reveals upregulation of floor plate genes and repression of ventrolateral genes in midbrain dopaminergic progenitors

Por Metzakopian, Emmanouil, Lin, Wei, Salmon-Divon, Mali, Dvinge, Heidi, Andersson, Elisabet, Ericson, Johan, Perlmann, Thomas, Whitsett, Jeffrey A., Bertone, Paul, Ang, Siew-Lan
Publicado em 2012

Expression of androgen receptor splice variants in clinical breast cancers

Por Hickey, Theresa E., Irvine, Connie M., Dvinge, Heidi, Tarulli, Gerard A., Hanson, Adrienne R., Ryan, Natalie K., Pickering, Marie A., Birrell, Stephen N., Hu, Dong Gui, Mackenzie, Peter I., Russell, Roslin, Caldas, Carlos, Raj, Ganesh V., Dehm, Scott M., Plymate, Stephen R., Bradley, Robert K., Tilley, Wayne D., Selth, Luke A.
Publicado no Oncotarget (2015)

Modulation of splicing catalysis for therapeutic targeting of leukemias with spliceosomal mutations

Por Lee, Stanley Chun-Wei, Dvinge, Heidi, Kim, Eunhee, Cho, Hana, Micol, Jean-Baptiste, Chung, Young Rock, Durham, Benjamin H., Yoshimi, Akihide, Kim, Young Joon, Thomas, Michael, Lobry, Camille, Chen, Chun-Wei, Pastore, Alessandro, Taylor, Justin, Wang, Xujun, Krivtsov, Andrei, Armstrong, Scott A., Palacino, James, Buonamici, Silvia, Smith, Peter G., Bradley, Robert K., Abdel-Wahab, Omar
Publicado no Nat Med (2016)

Corrigendum: Modulation of splicing catalysis for therapeutic targeting of leukemia with mutations in genes encoding spliceosomal proteins

Por Lee, Stanley Chun-Wei, Dvinge, Heidi, Kim, Eunhee, Cho, Hana, Micol, Jean-Baptiste, Chung, Young Rock, Durham, Benjamin H, Yoshimi, Akihide, Kim, Young Joon, Thomas, Michael, Lobry, Camille, Chen, Chun-Wei, Pastore, Alessandro, Taylor, Justin, Wang, Xujun, Krivtsov, Andrei, Armstrong, Scott A, Palacino, James, Buonamici, Silvia, Smith, Peter G, Bradley, Robert K, Abdel-Wahab, Omar
Publicado no Nat Med (2016)

Coordinated Alterations in RNA Splicing and Epigenetic Regulation Drive Leukemogenesis

Por Yoshimi, Akihide, Lin, Kuan-Ting, Wiseman, Daniel H., Rahman, Mohammad Alinoor, Pastore, Alessandro, Wang, Bo, Lee, Stanley Chun-Wei, Micol, Jean-Baptiste, Zhang, Xiao Jing, de Botton, Stephane, Penard-Lacronique, Virginie, Stein, Eytan M., Cho, Hana, Miles, Rachel E., Inoue, Daichi, Albrecht, Todd R., Somervaille, Tim C.P., Batta, Kiran, Amaral, Fabio, Simeoni, Fabrizio, Wilks, Deepti P., Cargo, Catherine, Intlekofer, Andrew M., Levine, Ross L., Dvinge, Heidi, Bradley, Robert K., Wagner, Eric J., Krainer, Adrian R., Abdel-Wahab, Omar
Publicado no Nature (2019)

Integrative clinical genomics of advanced prostate cancer

Por Dan, Robinson, Van Allen, Eliezer M., Wu, Yi-Mi, Schultz, Nikolaus, Lonigro, Robert J., Mosquera, Juan-Miguel, Montgomery, Bruce, Taplin, Mary-Ellen, Pritchard, Colin C, Attard, Gerhardt, Beltran, Himisha, Abida, Wassim M., Bradley, Robert K., Vinson, Jake, Cao, Xuhong, Vats, Pankaj, Kunju, Lakshmi P., Hussain, Maha, Feng, Felix Y., Tomlins, Scott A., Cooney, Kathleen A., Smith, David C., Brennan, Christine, Siddiqui, Javed, Mehra, Rohit, Chen, Yu, Rathkopf, Dana E., Morris, Michael J., Solomon, Stephen B., Durack, Jeremy C., Reuter, Victor E., Gopalan, Anuradha, Gao, Jianjiong, Loda, Massimo, Lis, Rosina T., Bowden, Michaela, Balk, Stephen P., Gaviola, Glenn, Sougnez, Carrie, Gupta, Manaswi, Yu, Evan Y., Mostaghel, Elahe A., Cheng, Heather H., Mulcahy, Hyojeong, True, Lawrence D., Plymate, Stephen R., Dvinge, Heidi, Ferraldeschi, Roberta, Flohr, Penny, Miranda, Susana, Zafeiriou, Zafeiris, Tunariu, Nina, Mateo, Joaquin, Lopez, Raquel Perez, Demichelis, Francesca, Robinson, Brian D., Schiffman, Marc A., Nanus, David M., Tagawa, Scott T., Sigaras, Alexandros, Eng, Kenneth W., Elemento, Olivier, Sboner, Andrea, Heath, Elisabeth I., Scher, Howard I., Pienta, Kenneth J., Kantoff, Philip, de Bono, Johann S., Rubin, Mark A., Nelson, Peter S., Garraway, Levi A., Sawyers, Charles L., Chinnaiyan, Arul M.
Publicado no Cell (2015)