geneAttribution: trait agnostic identification of candidate genes associated with noncoding variation

по Wuster, Arthur, Chang, Diana, Behrens, Timothy W, Bhangale, Tushar R
Опубликовано в: Bioinformatics (2017)

Using Gene Expression to Improve the Power of Genome-Wide Association Analysis

по Ho, Yen-Yi, Baechler, Emily C., Ortmann, Ward, Behrens, Timothy W., Graham, Robert R., Bhangale, Tushar R., Pan, Wei
Опубликовано 2014

Identifying and mitigating batch effects in whole genome sequencing data

по Tom, Jennifer A., Reeder, Jens, Forrest, William F., Graham, Robert R., Hunkapiller, Julie, Behrens, Timothy W., Bhangale, Tushar R.
Опубликовано в: BMC Bioinformatics (2017)

Association of NCF2, IKZF1, IRF8, IFIH1, and TYK2 with Systemic Lupus Erythematosus

по Cunninghame Graham, Deborah S., Morris, David L., Bhangale, Tushar R., Criswell, Lindsey A., Syvänen, Ann-Christine, Rönnblom, Lars, Behrens, Timothy W., Graham, Robert R., Vyse, Timothy J.
Опубликовано 2011

A meta-analysis of genome-wide association studies identifies 17 new Parkinson’s disease risk loci

по Chang, Diana, Nalls, Mike A, Hallgrímsdóttir, Ingileif B, Hunkapiller, Julie, van der Brug, Marcel, Cai, Fang, Kerchner, Geoffrey A, Ayalon, Gai, Bingol, Baris, Sheng, Morgan, Hinds, David, Behrens, Timothy W, Singleton, Andrew B, Bhangale, Tushar R, Graham, Robert R
Опубликовано в: Nat Genet (2017)

Evaluation of IFITM3 rs12252 Association With Severe Pediatric Influenza Infection

по Randolph, Adrienne G., Yip, Wai-Ki, Allen, Emma Kaitlynn, Rosenberger, Carrie M., Agan, Anna A., Ash, Stephanie A., Zhang, Yu, Bhangale, Tushar R., Finkelstein, David, Cvijanovich, Natalie Z., Mourani, Peter M., Hall, Mark W., Su, Helen C., Thomas, Paul G.
Опубликовано в: J Infect Dis (2017)

Previously reported placebo-response-associated variants do not predict patient outcomes in inflammatory disease Phase III trial placebo arms

по Haug-Baltzell, Asher, Bhangale, Tushar R., Chang, Diana, Dressen, Amy, Yaspan, Brian L., Ortmann, Ward, Brauer, Matthew J., Hunkapiller, Julie, Reeder, Jens, Mukhyala, Kiran, Cuenco, Karen T., Tom, Jennifer A., Cowgill, Amy, Vogel, Jan, Forrest, William F., Behrens, Timothy W., Graham, Robert R., Wuster, Arthur
Опубликовано в: Genes Immun (2018)

A common variant of IL-6R is associated with elevated IL-6 pathway activity in Alzheimer’s disease brains

по Haddick, Patrick C.G., Larson, Jessica L., Rathore, Nisha, Bhangale, Tushar R., Phung, Qui T., Srinivasan, Karpagam, Hansen, David V., Lill, Jennie R., Pericak-Vance, Margaret A., Haines, Jonathan, Farrer, Lindsay A., Kauwe, John S., Schellenberg, Gerard D., Cruchaga, Carlos, Goate, Alison M., Behrens, Timothy W., Watts, Ryan J., Graham, Robert R., Kaminker, Joshua S., van der Brug, Marcel
Опубликовано в: J Alzheimers Dis (2017)

Analysis of protein-altering variants in telomerase genes and their association with MUC5B common variant status in patients with idiopathic pulmonary fibrosis: a candidate gene se...

по Dressen, Amy, Abbas, Alexander R., Cabanski, Christopher, Reeder, Janina, Ramalingam, Thirumalai R., Neighbors, Margaret, Bhangale, Tushar R., Brauer, Matthew J., Hunkapiller, Julie, Reeder, Jens, Mukhyala, Kiran, Cuenco, Karen, Tom, Jennifer, Cowgill, Amy, Vogel, Jan, Forrest, William F., Collard, Harold R., Wolters, Paul J., Kropski, Jonathan A., Lancaster, Lisa H., Blackwell, Timothy S., Arron, Joseph R., Yaspan, Brian L.
Опубликовано в: Lancet Respir Med (2018)

Heritability and Genome-wide Association Study To Assess Genetic Differences Between Advanced Age-Related Macular Degeneration Subtypes

по Sobrin, Lucia, Ripke, Stephan, Yu, Yi, Fagerness, Jesen, Bhangale, Tushar R., Tan, Perciliz L., Souied, Eric H., Buitendijk, Gabriëlle H.S., Merriam, Joanna E., Richardson, Andrea J., Raychaudhuri, Soumya, Reynolds, Robyn, Chin, Kimberly A., Lee, Aaron Y., Leveziel, Nicolas, Zack, Donald J., Campochiaro, Peter, Smith, R. Theodore, Barile, Gaetano R., Hogg, Ruth E., Chakravarthy, Usha, Behrens, Timothy W., Uitterlinden, André G., van Duijn, Cornelia M., Vingerling, Johannes R., Brantley, Milam A., Baird, Paul N., Klaver, Caroline C.W., Allikmets, Rando, Katsanis, Nicholas, Graham, Robert R., Ioannidis, John P.A., Daly, Mark J., Seddon, Johanna M.
Опубликовано 2012

Common variants near FRK/COL10A1 and VEGFA are associated with advanced age-related macular degeneration

по Yu, Yi, Bhangale, Tushar R., Fagerness, Jesen, Ripke, Stephan, Thorleifsson, Gudmar, Tan, Perciliz L., Souied, Eric H., Richardson, Andrea J., Merriam, Joanna E., Buitendijk, Gabriëlle H.S., Reynolds, Robyn, Raychaudhuri, Soumya, Chin, Kimberly A., Sobrin, Lucia, Evangelou, Evangelos, Lee, Phil H., Lee, Aaron Y., Leveziel, Nicolas, Zack, Donald J., Campochiaro, Betsy, Campochiaro, Peter, Smith, R. Theodore, Barile, Gaetano R., Guymer, Robyn H., Hogg, Ruth, Chakravarthy, Usha, Robman, Luba D., Gustafsson, Omar, Sigurdsson, Haraldur, Ortmann, Ward, Behrens, Timothy W., Stefansson, Kari, Uitterlinden, André G., van Duijn, Cornelia M., Vingerling, Johannes R., Klaver, Caroline C.W., Allikmets, Rando, Brantley, Milam A., Baird, Paul N., Katsanis, Nicholas, Thorsteinsdottir, Unnur, Ioannidis, John P.A., Daly, Mark J., Graham, Robert R., Seddon, Johanna M.
Опубликовано 2011

TYK2 Protein-Coding Variants Protect against Rheumatoid Arthritis and Autoimmunity, with No Evidence of Major Pleiotropic Effects on Non-Autoimmune Complex Traits

по Diogo, Dorothée, Bastarache, Lisa, Liao, Katherine P., Graham, Robert R., Fulton, Robert S., Greenberg, Jeffrey D., Eyre, Steve, Bowes, John, Cui, Jing, Lee, Annette, Pappas, Dimitrios A., Kremer, Joel M., Barton, Anne, Coenen, Marieke J. H., Franke, Barbara, Kiemeney, Lambertus A., Mariette, Xavier, Richard-Miceli, Corrine, Canhão, Helena, Fonseca, João E., de Vries, Niek, Tak, Paul P., Crusius, J. Bart A., Nurmohamed, Michael T., Kurreeman, Fina, Mikuls, Ted R., Okada, Yukinori, Stahl, Eli A., Larson, David E., Deluca, Tracie L., O'Laughlin, Michelle, Fronick, Catrina C., Fulton, Lucinda L., Kosoy, Roman, Ransom, Michael, Bhangale, Tushar R., Ortmann, Ward, Cagan, Andrew, Gainer, Vivian, Karlson, Elizabeth W., Kohane, Isaac, Murphy, Shawn N., Martin, Javier, Zhernakova, Alexandra, Klareskog, Lars, Padyukov, Leonid, Worthington, Jane, Mardis, Elaine R., Seldin, Michael F., Gregersen, Peter K., Behrens, Timothy, Raychaudhuri, Soumya, Denny, Joshua C., Plenge, Robert M.
Опубликовано в: PLoS One (2015)

Large-Scale Gene-Centric Meta-analysis across 32 Studies Identifies Multiple Lipid Loci

по Asselbergs, Folkert W., Guo, Yiran, van Iperen, Erik P.A., Sivapalaratnam, Suthesh, Tragante, Vinicius, Lanktree, Matthew B., Lange, Leslie A., Almoguera, Berta, Appelman, Yolande E., Barnard, John, Baumert, Jens, Beitelshees, Amber L., Bhangale, Tushar R., Chen, Yii-Der Ida, Gaunt, Tom R., Gong, Yan, Hopewell, Jemma C., Johnson, Toby, Kleber, Marcus E., Langaee, Taimour Y., Li, Mingyao, Li, Yun R., Liu, Kiang, McDonough, Caitrin W., Meijs, Matthijs F.L., Middelberg, Rita P.S., Musunuru, Kiran, Nelson, Christopher P., O’Connell, Jeffery R., Padmanabhan, Sandosh, Pankow, James S., Pankratz, Nathan, Rafelt, Suzanne, Rajagopalan, Ramakrishnan, Romaine, Simon P.R., Schork, Nicholas J., Shaffer, Jonathan, Shen, Haiqing, Smith, Erin N., Tischfield, Sam E., van der Most, Peter J., van Vliet-Ostaptchouk, Jana V., Verweij, Niek, Volcik, Kelly A., Zhang, Li, Bailey, Kent R., Bailey, Kristian M., Bauer, Florianne, Boer, Jolanda M.A., Braund, Peter S., Burt, Amber, Burton, Paul R., Buxbaum, Sarah G., Chen, Wei, Cooper-DeHoff, Rhonda M., Cupples, L. Adrienne, deJong, Jonas S., Delles, Christian, Duggan, David, Fornage, Myriam, Furlong, Clement E., Glazer, Nicole, Gums, John G., Hastie, Claire, Holmes, Michael V., Illig, Thomas, Kirkland, Susan A., Kivimaki, Mika, Klein, Ronald, Klein, Barbara E., Kooperberg, Charles, Kottke-Marchant, Kandice, Kumari, Meena, LaCroix, Andrea Z., Mallela, Laya, Murugesan, Gurunathan, Ordovas, Jose, Ouwehand, Willem H., Post, Wendy S., Saxena, Richa, Scharnagl, Hubert, Schreiner, Pamela J., Shah, Tina, Shields, Denis C., Shimbo, Daichi, Srinivasan, Sathanur R., Stolk, Ronald P., Swerdlow, Daniel I., Taylor, Herman A., Topol, Eric J., Toskala, Elina, van Pelt, Joost L., van Setten, Jessica, Yusuf, Salim, Whittaker, John C., Zwinderman, A.H., Anand, Sonia S., Balmforth, Anthony J., Berenson, Gerald S., Bezzina, Connie R., Boehm, Bernhard O., Boerwinkle, Eric, Casas, Juan P., Caulfield, Mark J., Clarke, Robert, Connell, John M., Cruickshanks, Karen J., Davidson, Karina W., Day, Ian N.M., de Bakker, Paul I.W., Doevendans, Pieter A., Dominiczak, Anna F., Hall, Alistair S., Hartman, Catharina A., Hengstenberg, Christian, Hillege, Hans L., Hofker, Marten H., Humphries, Steve E., Jarvik, Gail P., Johnson, Julie A., Kaess, Bernhard M., Kathiresan, Sekar, Koenig, Wolfgang, Lawlor, Debbie A., März, Winfried, Melander, Olle, Mitchell, Braxton D., Montgomery, Grant W., Munroe, Patricia B., Murray, Sarah S., Newhouse, Stephen J., Onland-Moret, N. Charlotte, Poulter, Neil, Psaty, Bruce, Redline, Susan, Rich, Stephen S., Rotter, Jerome I., Schunkert, Heribert, Sever, Peter, Shuldiner, Alan R., Silverstein, Roy L., Stanton, Alice, Thorand, Barbara, Trip, Mieke D., Tsai, Michael Y., van der Harst, Pim, van der Schoot, Ellen, van der Schouw, Yvonne T., Verschuren, W.M. Monique, Watkins, Hugh, Wilde, Arthur A.M., Wolffenbuttel, Bruce H.R., Whitfield, John B., Hovingh, G. Kees, Ballantyne, Christie M., Wijmenga, Cisca, Reilly, Muredach P., Martin, Nicholas G., Wilson, James G., Rader, Daniel J., Samani, Nilesh J., Reiner, Alex P., Hegele, Robert A., Kastelein, John J.P., Hingorani, Aroon D., Talmud, Philippa J., Hakonarson, Hakon, Elbers, Clara C., Keating, Brendan J., Drenos, Fotios
Опубликовано 2012