A Visual Interface Designed for Novice Users to find Research Patient Cohorts in a Large Biomedical Database

Por Murphy, Shawn N., Gainer, Vivian, Chueh, Henry C.
Publicado em 2003

Predictors of severe outcomes associated with Clostridium difficile infection in patients with Inflammatory Bowel Disease

Por Ananthakrishnan, Ashwin N, Guzman-Perez, Raul, Gainer, Vivian, Murphy, Shawn
Publicado em 2012

Strategies for maintaining patient privacy in i2b2

Por Murphy, Shawn N, Gainer, Vivian, Mendis, Michael, Churchill, Susanne, Kohane, Isaac
Publicado em 2011

Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2)

Por Murphy, Shawn N, Weber, Griffin, Mendis, Michael, Gainer, Vivian, Chueh, Henry C, Churchill, Susanne, Kohane, Isaac
Publicado em 2010

sureLDA: A multidisease automated phenotyping method for the electronic health record

Por Ahuja, Yuri, Zhou, Doudou, He, Zeling, Sun, Jiehuan, Castro, Victor M, Gainer, Vivian, Murphy, Shawn N, Hong, Chuan, Cai, Tianxi
Publicado no J Am Med Inform Assoc (2020)

Evaluation of Matched Control Algorithms in EHR-based Phenotyping Studies: A Case Study of Inflammatory Bowel Disease Comorbidities

Por Castro, Victor M, Mahamaneerat, Wannapa, Gainer, Vivian S, Ananthakrishnan, Ashwin N., Porter, Alyssa J., Wang, Taowei D, Herrick, Christopher D, Murphy, Shawn N
Publicado no J Biomed Inform (2014)

Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources

Por Yu, Sheng, Liao, Katherine P, Shaw, Stanley Y, Gainer, Vivian S, Churchill, Susanne E, Szolovits, Peter, Murphy, Shawn N, Kohane, Isaac S., Cai, Tianxi
Publicado no J Am Med Inform Assoc (2015)

Lipid and lipoprotein levels and trends in rheumatoid arthritis compared to the general population

Por Liao, Katherine P., Cai, Tianxi, Gainer, Vivian, Murphy, Shawn, Cagan, Andrew, Churchill, Susanne, Shaw, Stanley, Kohane, Isaac, Plenge, Robert M., Karlson, Elizabeth W.
Publicado em 2013

Instrumenting the health care enterprise for discovery research in the genomic era

Por Murphy, Shawn, Churchill, Susanne, Bry, Lynn, Chueh, Henry, Weiss, Scott, Lazarus, Ross, Zeng, Qing, Dubey, Anil, Gainer, Vivian, Mendis, Michael, Glaser, John, Kohane, Isaac
Publicado em 2009

Colonoscopy is Associated with a Reduced Risk for Colon Cancer and Mortality in Patients with Inflammatory Bowel Diseases

Por Ananthakrishnan, Ashwin N., Cagan, Andrew, Cai, Tianxi, Gainer, Vivian S., Shaw, Stanley Y, Churchill, Susanne, Karlson, Elizabeth W., Murphy, Shawn N., Kohane, Isaac, Liao, Katherine P.
Publicado no Clin Gastroenterol Hepatol (2014)

Diabetes and risk of infections with immunomodulator therapy in inflammatory bowel diseases

Por Ananthakrishnan, Ashwin N., Cagan, Andrew, Cai, Tianxi, Gainer, Vivian S., Shaw, Stanley Y, Churchill, Susanne, Karlson, Elizabeth W., Murphy, Shawn N., Kohane, Isaac, Liao, Katherine P.
Publicado no Aliment Pharmacol Ther (2015)

Statin use is Associated With Reduced Risk of Colorectal Cancer in Patients with Inflammatory Bowel Diseases

Por Ananthakrishnan, Ashwin N., Cagan, Andrew, Cai, Tianxi, Gainer, Vivian S., Shaw, Stanley Y, Churchill, Susanne, Karlson, Elizabeth W., Murphy, Shawn N., Liao, Katherine P., Kohane, Isaac
Publicado no Clin Gastroenterol Hepatol (2016)

Architecture of the Open-source Clinical Research Chart from Informatics for Integrating Biology and the Bedside

Por Murphy, Shawn N., Mendis, Michael, Hackett, Kristel, Kuttan, Rajesh, Pan, Wensong, Phillips, Lori C., Gainer, Vivian, Berkowicz, David, Glaser, John P., Kohane, Isaac, Chueh, Henry C.
Publicado em 2007

Identification of subjects with polycystic ovary syndrome using electronic health records

Por Castro, Victor, Shen, Yuanyuan, Yu, Sheng, Finan, Sean, Pau, Cindy Ta, Gainer, Vivian, Keefe, Candace C., Savova, Guergana, Murphy, Shawn N., Cai, Tianxi, Welt, Corrine K.
Publicado no Reprod Biol Endocrinol (2015)

The Biobank Portal for Partners Personalized Medicine: A Query Tool for Working with Consented Biobank Samples, Genotypes, and Phenotypes Using i2b2

Por Gainer, Vivian S., Cagan, Andrew, Castro, Victor M., Duey, Stacey, Ghosh, Bhaswati, Goodson, Alyssa P., Goryachev, Sergey, Metta, Reeta, Wang, Taowei David, Wattanasin, Nich, Murphy, Shawn N.
Publicado no J Pers Med (2016)

Lipid-Lowering Agents and High HDL are Inversely Associated with Intracranial Aneurysm Rupture

Por Can, Anil, Castro, Victor M., Dligach, Dmitriy, Finan, Sean, Yu, Sheng, Gainer, Vivian, Shadick, Nancy A., Savova, Guergana, Murphy, Shawn, Cai, Tianxi, Weiss, Scott T., Du, Rose
Publicado no Stroke (2018)

Surrogate-assisted feature extraction for high-throughput phenotyping

Por Yu, Sheng, Chakrabortty, Abhishek, Liao, Katherine P, Cai, Tianrun, Ananthakrishnan, Ashwin N, Gainer, Vivian S, Churchill, Susanne E, Szolovits, Peter, Murphy, Shawn N, Kohane, Isaac S, Cai, Tianxi
Publicado no J Am Med Inform Assoc (2017)

Elevated International Normalized Ratio is Associated with Ruptured Aneurysms

Por Can, Anil, Castro, Victor M., Dligach, Dmitriy, Finan, Sean, Yu, Sheng, Gainer, Vivian, Shadick, Nancy A., Savova, Guergana, Murphy, Shawn, Cai, Tianxi, Weiss, Scott T., Du, Rose
Publicado no Stroke (2018)

Feasibility of studying brain morphology in major depressive disorder with structural magnetic resonance imaging and clinical data from the electronic medical record: A pilot study

Por Hoogenboom, Wouter S., Perlis, Roy H., Smoller, Jordan W., Zeng-Treitler, Qing, Gainer, Vivian S., Murphy, Shawn N., Churchill, Susanne E., Kohane, Isaac S., Shenton, Martha E., Iosifescu, Dan V.
Publicado em 2012

Mode of child-birth and long-term outcomes in women with inflammatory bowel diseases

Por Ananthakrishnan, Ashwin N., Cheng, Alice, Cagan, Andrew, Cai, Tianxi, Gainer, Vivian S., Shaw, Stanley Y, Churchill, Susanne, Karlson, Elizabeth W., Murphy, Shawn N., Kohane, Isaac, Liao, Katherine P.
Publicado no Dig Dis Sci (2014)