geneAttribution: trait agnostic identification of candidate genes associated with noncoding variation

מאת Wuster, Arthur, Chang, Diana, Behrens, Timothy W, Bhangale, Tushar R
הוצא לאור ב Bioinformatics (2017)

Using Gene Expression to Improve the Power of Genome-Wide Association Analysis

מאת Ho, Yen-Yi, Baechler, Emily C., Ortmann, Ward, Behrens, Timothy W., Graham, Robert R., Bhangale, Tushar R., Pan, Wei
יצא לאור 2014

Identifying and mitigating batch effects in whole genome sequencing data

מאת Tom, Jennifer A., Reeder, Jens, Forrest, William F., Graham, Robert R., Hunkapiller, Julie, Behrens, Timothy W., Bhangale, Tushar R.
הוצא לאור ב BMC Bioinformatics (2017)

Association of NCF2, IKZF1, IRF8, IFIH1, and TYK2 with Systemic Lupus Erythematosus

מאת Cunninghame Graham, Deborah S., Morris, David L., Bhangale, Tushar R., Criswell, Lindsey A., Syvänen, Ann-Christine, Rönnblom, Lars, Behrens, Timothy W., Graham, Robert R., Vyse, Timothy J.
יצא לאור 2011

A meta-analysis of genome-wide association studies identifies 17 new Parkinson’s disease risk loci

מאת Chang, Diana, Nalls, Mike A, Hallgrímsdóttir, Ingileif B, Hunkapiller, Julie, van der Brug, Marcel, Cai, Fang, Kerchner, Geoffrey A, Ayalon, Gai, Bingol, Baris, Sheng, Morgan, Hinds, David, Behrens, Timothy W, Singleton, Andrew B, Bhangale, Tushar R, Graham, Robert R
הוצא לאור ב Nat Genet (2017)

Evaluation of IFITM3 rs12252 Association With Severe Pediatric Influenza Infection

מאת Randolph, Adrienne G., Yip, Wai-Ki, Allen, Emma Kaitlynn, Rosenberger, Carrie M., Agan, Anna A., Ash, Stephanie A., Zhang, Yu, Bhangale, Tushar R., Finkelstein, David, Cvijanovich, Natalie Z., Mourani, Peter M., Hall, Mark W., Su, Helen C., Thomas, Paul G.
הוצא לאור ב J Infect Dis (2017)

Previously reported placebo-response-associated variants do not predict patient outcomes in inflammatory disease Phase III trial placebo arms

מאת Haug-Baltzell, Asher, Bhangale, Tushar R., Chang, Diana, Dressen, Amy, Yaspan, Brian L., Ortmann, Ward, Brauer, Matthew J., Hunkapiller, Julie, Reeder, Jens, Mukhyala, Kiran, Cuenco, Karen T., Tom, Jennifer A., Cowgill, Amy, Vogel, Jan, Forrest, William F., Behrens, Timothy W., Graham, Robert R., Wuster, Arthur
הוצא לאור ב Genes Immun (2018)

A common variant of IL-6R is associated with elevated IL-6 pathway activity in Alzheimer’s disease brains

מאת Haddick, Patrick C.G., Larson, Jessica L., Rathore, Nisha, Bhangale, Tushar R., Phung, Qui T., Srinivasan, Karpagam, Hansen, David V., Lill, Jennie R., Pericak-Vance, Margaret A., Haines, Jonathan, Farrer, Lindsay A., Kauwe, John S., Schellenberg, Gerard D., Cruchaga, Carlos, Goate, Alison M., Behrens, Timothy W., Watts, Ryan J., Graham, Robert R., Kaminker, Joshua S., van der Brug, Marcel
הוצא לאור ב J Alzheimers Dis (2017)

Analysis of protein-altering variants in telomerase genes and their association with MUC5B common variant status in patients with idiopathic pulmonary fibrosis: a candidate gene se...

מאת Dressen, Amy, Abbas, Alexander R., Cabanski, Christopher, Reeder, Janina, Ramalingam, Thirumalai R., Neighbors, Margaret, Bhangale, Tushar R., Brauer, Matthew J., Hunkapiller, Julie, Reeder, Jens, Mukhyala, Kiran, Cuenco, Karen, Tom, Jennifer, Cowgill, Amy, Vogel, Jan, Forrest, William F., Collard, Harold R., Wolters, Paul J., Kropski, Jonathan A., Lancaster, Lisa H., Blackwell, Timothy S., Arron, Joseph R., Yaspan, Brian L.
הוצא לאור ב Lancet Respir Med (2018)

Heritability and Genome-wide Association Study To Assess Genetic Differences Between Advanced Age-Related Macular Degeneration Subtypes

מאת Sobrin, Lucia, Ripke, Stephan, Yu, Yi, Fagerness, Jesen, Bhangale, Tushar R., Tan, Perciliz L., Souied, Eric H., Buitendijk, Gabriëlle H.S., Merriam, Joanna E., Richardson, Andrea J., Raychaudhuri, Soumya, Reynolds, Robyn, Chin, Kimberly A., Lee, Aaron Y., Leveziel, Nicolas, Zack, Donald J., Campochiaro, Peter, Smith, R. Theodore, Barile, Gaetano R., Hogg, Ruth E., Chakravarthy, Usha, Behrens, Timothy W., Uitterlinden, André G., van Duijn, Cornelia M., Vingerling, Johannes R., Brantley, Milam A., Baird, Paul N., Klaver, Caroline C.W., Allikmets, Rando, Katsanis, Nicholas, Graham, Robert R., Ioannidis, John P.A., Daly, Mark J., Seddon, Johanna M.
יצא לאור 2012

Common variants near FRK/COL10A1 and VEGFA are associated with advanced age-related macular degeneration

מאת Yu, Yi, Bhangale, Tushar R., Fagerness, Jesen, Ripke, Stephan, Thorleifsson, Gudmar, Tan, Perciliz L., Souied, Eric H., Richardson, Andrea J., Merriam, Joanna E., Buitendijk, Gabriëlle H.S., Reynolds, Robyn, Raychaudhuri, Soumya, Chin, Kimberly A., Sobrin, Lucia, Evangelou, Evangelos, Lee, Phil H., Lee, Aaron Y., Leveziel, Nicolas, Zack, Donald J., Campochiaro, Betsy, Campochiaro, Peter, Smith, R. Theodore, Barile, Gaetano R., Guymer, Robyn H., Hogg, Ruth, Chakravarthy, Usha, Robman, Luba D., Gustafsson, Omar, Sigurdsson, Haraldur, Ortmann, Ward, Behrens, Timothy W., Stefansson, Kari, Uitterlinden, André G., van Duijn, Cornelia M., Vingerling, Johannes R., Klaver, Caroline C.W., Allikmets, Rando, Brantley, Milam A., Baird, Paul N., Katsanis, Nicholas, Thorsteinsdottir, Unnur, Ioannidis, John P.A., Daly, Mark J., Graham, Robert R., Seddon, Johanna M.
יצא לאור 2011

TYK2 Protein-Coding Variants Protect against Rheumatoid Arthritis and Autoimmunity, with No Evidence of Major Pleiotropic Effects on Non-Autoimmune Complex Traits

מאת Diogo, Dorothée, Bastarache, Lisa, Liao, Katherine P., Graham, Robert R., Fulton, Robert S., Greenberg, Jeffrey D., Eyre, Steve, Bowes, John, Cui, Jing, Lee, Annette, Pappas, Dimitrios A., Kremer, Joel M., Barton, Anne, Coenen, Marieke J. H., Franke, Barbara, Kiemeney, Lambertus A., Mariette, Xavier, Richard-Miceli, Corrine, Canhão, Helena, Fonseca, João E., de Vries, Niek, Tak, Paul P., Crusius, J. Bart A., Nurmohamed, Michael T., Kurreeman, Fina, Mikuls, Ted R., Okada, Yukinori, Stahl, Eli A., Larson, David E., Deluca, Tracie L., O'Laughlin, Michelle, Fronick, Catrina C., Fulton, Lucinda L., Kosoy, Roman, Ransom, Michael, Bhangale, Tushar R., Ortmann, Ward, Cagan, Andrew, Gainer, Vivian, Karlson, Elizabeth W., Kohane, Isaac, Murphy, Shawn N., Martin, Javier, Zhernakova, Alexandra, Klareskog, Lars, Padyukov, Leonid, Worthington, Jane, Mardis, Elaine R., Seldin, Michael F., Gregersen, Peter K., Behrens, Timothy, Raychaudhuri, Soumya, Denny, Joshua C., Plenge, Robert M.
הוצא לאור ב PLoS One (2015)

Large-Scale Gene-Centric Meta-analysis across 32 Studies Identifies Multiple Lipid Loci

מאת Asselbergs, Folkert W., Guo, Yiran, van Iperen, Erik P.A., Sivapalaratnam, Suthesh, Tragante, Vinicius, Lanktree, Matthew B., Lange, Leslie A., Almoguera, Berta, Appelman, Yolande E., Barnard, John, Baumert, Jens, Beitelshees, Amber L., Bhangale, Tushar R., Chen, Yii-Der Ida, Gaunt, Tom R., Gong, Yan, Hopewell, Jemma C., Johnson, Toby, Kleber, Marcus E., Langaee, Taimour Y., Li, Mingyao, Li, Yun R., Liu, Kiang, McDonough, Caitrin W., Meijs, Matthijs F.L., Middelberg, Rita P.S., Musunuru, Kiran, Nelson, Christopher P., O’Connell, Jeffery R., Padmanabhan, Sandosh, Pankow, James S., Pankratz, Nathan, Rafelt, Suzanne, Rajagopalan, Ramakrishnan, Romaine, Simon P.R., Schork, Nicholas J., Shaffer, Jonathan, Shen, Haiqing, Smith, Erin N., Tischfield, Sam E., van der Most, Peter J., van Vliet-Ostaptchouk, Jana V., Verweij, Niek, Volcik, Kelly A., Zhang, Li, Bailey, Kent R., Bailey, Kristian M., Bauer, Florianne, Boer, Jolanda M.A., Braund, Peter S., Burt, Amber, Burton, Paul R., Buxbaum, Sarah G., Chen, Wei, Cooper-DeHoff, Rhonda M., Cupples, L. Adrienne, deJong, Jonas S., Delles, Christian, Duggan, David, Fornage, Myriam, Furlong, Clement E., Glazer, Nicole, Gums, John G., Hastie, Claire, Holmes, Michael V., Illig, Thomas, Kirkland, Susan A., Kivimaki, Mika, Klein, Ronald, Klein, Barbara E., Kooperberg, Charles, Kottke-Marchant, Kandice, Kumari, Meena, LaCroix, Andrea Z., Mallela, Laya, Murugesan, Gurunathan, Ordovas, Jose, Ouwehand, Willem H., Post, Wendy S., Saxena, Richa, Scharnagl, Hubert, Schreiner, Pamela J., Shah, Tina, Shields, Denis C., Shimbo, Daichi, Srinivasan, Sathanur R., Stolk, Ronald P., Swerdlow, Daniel I., Taylor, Herman A., Topol, Eric J., Toskala, Elina, van Pelt, Joost L., van Setten, Jessica, Yusuf, Salim, Whittaker, John C., Zwinderman, A.H., Anand, Sonia S., Balmforth, Anthony J., Berenson, Gerald S., Bezzina, Connie R., Boehm, Bernhard O., Boerwinkle, Eric, Casas, Juan P., Caulfield, Mark J., Clarke, Robert, Connell, John M., Cruickshanks, Karen J., Davidson, Karina W., Day, Ian N.M., de Bakker, Paul I.W., Doevendans, Pieter A., Dominiczak, Anna F., Hall, Alistair S., Hartman, Catharina A., Hengstenberg, Christian, Hillege, Hans L., Hofker, Marten H., Humphries, Steve E., Jarvik, Gail P., Johnson, Julie A., Kaess, Bernhard M., Kathiresan, Sekar, Koenig, Wolfgang, Lawlor, Debbie A., März, Winfried, Melander, Olle, Mitchell, Braxton D., Montgomery, Grant W., Munroe, Patricia B., Murray, Sarah S., Newhouse, Stephen J., Onland-Moret, N. Charlotte, Poulter, Neil, Psaty, Bruce, Redline, Susan, Rich, Stephen S., Rotter, Jerome I., Schunkert, Heribert, Sever, Peter, Shuldiner, Alan R., Silverstein, Roy L., Stanton, Alice, Thorand, Barbara, Trip, Mieke D., Tsai, Michael Y., van der Harst, Pim, van der Schoot, Ellen, van der Schouw, Yvonne T., Verschuren, W.M. Monique, Watkins, Hugh, Wilde, Arthur A.M., Wolffenbuttel, Bruce H.R., Whitfield, John B., Hovingh, G. Kees, Ballantyne, Christie M., Wijmenga, Cisca, Reilly, Muredach P., Martin, Nicholas G., Wilson, James G., Rader, Daniel J., Samani, Nilesh J., Reiner, Alex P., Hegele, Robert A., Kastelein, John J.P., Hingorani, Aroon D., Talmud, Philippa J., Hakonarson, Hakon, Elbers, Clara C., Keating, Brendan J., Drenos, Fotios
יצא לאור 2012