ASCIIGenome: a command line genome browser for console terminals

מאת Beraldi, Dario
הוצא לאור ב Bioinformatics (2017)

G-Quadruplex structures are stable and detectable in human genomic DNA

מאת Lam, Enid Yi Ni, Beraldi, Dario, Tannahill, David, Balasubramanian, Shankar
יצא לאור 2013

Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution

מאת Booth, Michael J., Marsico, Giovanni, Bachman, Martin, Beraldi, Dario, Balasubramanian, Shankar
יצא לאור 2014

Genome-wide mapping of FOXM1 binding reveals co-binding with estrogen receptor alpha in breast cancer cells

מאת Sanders, Deborah A, Ross-Innes, Caryn S, Beraldi, Dario, Carroll, Jason S, Balasubramanian, Shankar
יצא לאור 2013

Accurate Measurement of 5-Methylcytosine and 5-Hydroxymethylcytosine in Human Cerebellum DNA by Oxidative Bisulfite on an Array (OxBS-Array)

מאת Field, Sarah F., Beraldi, Dario, Bachman, Martin, Stewart, Sabrina K., Beck, Stephan, Balasubramanian, Shankar
הוצא לאור ב PLoS One (2015)

FOXM1 binds directly to non-consensus sequences in the human genome

מאת Sanders, Deborah A., Gormally, Michael V., Marsico, Giovanni, Beraldi, Dario, Tannahill, David, Balasubramanian, Shankar
הוצא לאור ב Genome Biol (2015)

Identification and annotation of conserved promoters and macrophage-expressed genes in the pig genome

מאת Robert, Christelle, Kapetanovic, Ronan, Beraldi, Dario, Watson, Mick, Archibald, Alan L., Hume, David A.
הוצא לאור ב BMC Genomics (2015)

A strong quantitative trait locus for wing length on chromosome 2 in a wild population of great reed warblers

מאת Tarka, Maja, Åkesson, Mikael, Beraldi, Dario, Hernández-Sánchez, Jules, Hasselquist, Dennis, Bensch, Staffan, Hansson, Bengt
יצא לאור 2010

5-Formylcytosine alters the structure of the DNA double helix

מאת Raiber, Eun-Ang, Murat, Pierre, Chirgadze, Dimitri Y., Beraldi, Dario, Luisi, Ben F., Balasubramanian, Shankar
הוצא לאור ב Nat Struct Mol Biol (2014)

Development of a Linkage Map and Mapping of Phenotypic Polymorphisms in a Free-Living Population of Soay Sheep (Ovis aries)

מאת Beraldi, Dario, McRae, Allan F., Gratten, Jacob, Slate, Jon, Visscher, Peter M., Pemberton, Josephine M.
יצא לאור 2006

Genome-wide mapping of 5-hydroxymethyluracil in the eukaryote parasite Leishmania

מאת Kawasaki, Fumiko, Beraldi, Dario, Hardisty, Robyn E., McInroy, Gordon R., van Delft, Pieter, Balasubramanian, Shankar
הוצא לאור ב Genome Biol (2017)

Sequencing 5‐Hydroxymethyluracil at Single‐Base Resolution

מאת Kawasaki, Fumiko, Martínez Cuesta, Sergio, Beraldi, Dario, Mahtey, Areeb, Hardisty, Robyn E., Carrington, Mark, Balasubramanian, Shankar
הוצא לאור ב Angew Chem Int Ed Engl (2018)

Performance of Marker-Based Relatedness Estimators in Natural Populations of Outbred Vertebrates

מאת Csilléry, Katalin, Johnson, Toby, Beraldi, Dario, Clutton-Brock, Tim, Coltman, Dave, Hansson, Bengt, Spong, Goran, Pemberton, Josephine M.
יצא לאור 2006

Enhanced Methylation Analysis by Recovery of Unsequenceable Fragments

מאת McInroy, Gordon R., Beraldi, Dario, Raiber, Eun-Ang, Modrzynska, Katarzyna, van Delft, Pieter, Billker, Oliver, Balasubramanian, Shankar
הוצא לאור ב PLoS One (2016)

Oxidative bisulfite sequencing of 5-methylcytosine and 5-hydroxymethylcytosine

מאת Booth, Michael J, Ost, Tobias W B, Beraldi, Dario, Bell, Neil M, Branco, Miguel R, Reik, Wolf, Balasubramanian, Shankar
יצא לאור 2013

Genome duplication in Leishmania major relies on persistent subtelomeric DNA replication

מאת Damasceno, Jeziel Dener, Marques, Catarina A, Beraldi, Dario, Crouch, Kathryn, Lapsley, Craig, Obonaga, Ricardo, Tosi, Luiz RO, McCulloch, Richard
הוצא לאור ב eLife (2020)

Conditional knockout of RAD51-related genes in Leishmania major reveals a critical role for homologous recombination during genome replication

מאת Damasceno, Jeziel D., Reis-Cunha, João, Crouch, Kathryn, Beraldi, Dario, Lapsley, Craig, Tosi, Luiz R. O., Bartholomeu, Daniella, McCulloch, Richard
הוצא לאור ב PLoS Genet (2020)

In vivo genome-wide profiling reveals a tissue-specific role for 5-formylcytosine

מאת Iurlaro, Mario, McInroy, Gordon R., Burgess, Heather E., Dean, Wendy, Raiber, Eun-Ang, Bachman, Martin, Beraldi, Dario, Balasubramanian, Shankar, Reik, Wolf
הוצא לאור ב Genome Biol (2016)

The impact of breed and tissue compartment on the response of pig macrophages to lipopolysaccharide

מאת Kapetanovic, Ronan, Fairbairn, Lynsey, Downing, Alison, Beraldi, Dario, Sester, David P, Freeman, Tom C, Tuggle, Christopher K, Archibald, Alan L, Hume, David A
יצא לאור 2013

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase

מאת Raiber, Eun-Ang, Beraldi, Dario, Ficz, Gabriella, Burgess, Heather E, Branco, Miguel R, Murat, Pierre, Oxley, David, Booth, Michael J, Reik, Wolf, Balasubramanian, Shankar
יצא לאור 2012