Targeted sequencing library preparation by genomic DNA circularization

Por Myllykangas, Samuel, Natsoulis, Georges, Bell, John M, Ji, Hanlee P
Publicado em 2011

RVD: a command-line program for ultrasensitive rare single nucleotide variant detection using targeted next-generation DNA resequencing

Por Cushing, Anna, Flaherty, Patrick, Hopmans, Erik, Bell, John M, Ji, Hanlee P
Publicado em 2013

Efficient targeted resequencing of human germline and cancer genomes by oligonucleotide-selective sequencing

Por Myllykangas, Samuel, Buenrostro, Jason D, Natsoulis, Georges, Bell, John M, Ji, Hanlee P
Publicado no Nat Biotechnol (2011)

Allele-specific copy number profiling by next-generation DNA sequencing

Por Chen, Hao, Bell, John M., Zavala, Nicolas A., Ji, Hanlee P., Zhang, Nancy R.
Publicado no Nucleic Acids Res (2015)

A programmable method for massively parallel targeted sequencing

Por Hopmans, Erik S., Natsoulis, Georges, Bell, John M., Grimes, Susan M., Sieh, Weiva, Ji, Hanlee P.
Publicado em 2014

The Human OligoGenome Resource: a database of oligonucleotide capture probes for resequencing target regions across the human genome

Por Newburger, Daniel E., Natsoulis, Georges, Grimes, Sue, Bell, John M., Davis, Ronald W., Batzoglou, Serafim, Ji, Hanlee P.
Publicado em 2012

Identification of large rearrangements in cancer genomes with barcode linked reads

Por Xia, Li C, Bell, John M, Wood-Bouwens, Christina, Chen, Jiamin J, Zhang, Nancy R, Ji, Hanlee P
Publicado no Nucleic Acids Res (2018)

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size

Por Xia, Li C., Sakshuwong, Sukolsak, Hopmans, Erik S., Bell, John M., Grimes, Susan M., Siegmund, David O., Ji, Hanlee P., Zhang, Nancy R.
Publicado no Nucleic Acids Res (2016)

Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy

Por Bell, John M., Lau, Billy T., Greer, Stephanie U., Wood-Bouwens, Christina, Xia, Li C., Connolly, Ian D., Gephart, Melanie H., Ji, Hanlee P.
Publicado no Nucleic Acids Res (2017)

A Flexible Approach for Highly Multiplexed Candidate Gene Targeted Resequencing

Por Natsoulis, Georges, Bell, John M., Xu, Hua, Buenrostro, Jason D., Ordonez, Heather, Grimes, Susan, Newburger, Daniel, Jensen, Michael, Zahn, Jacob M., Zhang, Nancy, Ji, Hanlee P.
Publicado em 2011

Emergence of Hemagglutinin Mutations During the Course of Influenza Infection

Por Cushing, Anna, Kamali, Amanda, Winters, Mark, Hopmans, Erik S., Bell, John M., Grimes, Susan M., Xia, Li C., Zhang, Nancy R., Moss, Ronald B., Holodniy, Mark, Ji, Hanlee P.
Publicado no Sci Rep (2015)

Metastatic tumor evolution and organoid modeling implicate TGFBR2 as a cancer driver in diffuse gastric cancer

Por Nadauld, Lincoln D, Garcia, Sarah, Natsoulis, Georges, Bell, John M, Miotke, Laura, Hopmans, Erik S, Xu, Hua, Pai, Reetesh K, Palm, Curt, Regan, John F, Chen, Hao, Flaherty, Patrick, Ootani, Akifumi, Zhang, Nancy R, Ford, James M, Kuo, Calvin J, Ji, Hanlee P
Publicado em 2014

Haplotyping germline and cancer genomes using high-throughput linked-read sequencing

Por Zheng, Grace X.Y., Lau, Billy T., Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M., Hindson, Christopher M., Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A., Merrill, Landon, Terry, Jessica M., Mudivarti, Patrice A., Wyatt, Paul W., Bharadwaj, Rajiv, Makarewicz, Anthony J., Li, Yuan, Belgrader, Phillip, Price, Andrew D., Lowe, Adam J., Marks, Patrick, Vurens, Gerard M., Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E., Short, Steven W., Bjornson, Keith P., Patel, Pranav, Hopmans, Erik S., Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K., Stafford, David, Delaney, Joshua P., Wu, Indira, Ordonez, Heather S., Grimes, Susan M., Greer, Stephanie, Lee, Josephine Y., Belhocine, Kamila, Giorda, Kristina M., Heaton, William H., McDermott, Geoffrey P., Bent, Zachary W., Meschi, Francesca, Kondov, Nikola O., Wilson, Ryan, Bernate, Jorge A., Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N., Chan, Adrian, Saxonov, Serge, Ness, Kevin D., Hindson, Benjamin J., Ji, Hanlee P.
Publicado no Nat Biotechnol (2016)