Enzymes: An integrated view of structure, dynamics and function

por Agarwal, Pratul K
Publicado em 2006

A Biophysical Perspective on Enzyme Catalysis

por Agarwal, Pratul K.
Publicado no Biochemistry (2018)

Computational identification of slow conformational fluctuations in proteins

por Ramanathan, Arvind, Agarwal, Pratul K.
Publicado em 2009

Evolutionarily Conserved Linkage between Enzyme Fold, Flexibility, and Catalysis

por Ramanathan, Arvind, Agarwal, Pratul K.
Publicado em 2011

On the Case of the Misplaced Hydrogens

por Kumar, Prashasti, Agarwal, Pratul K., Cuneo, Matthew J.
Publicado no Chembiochem (2020)

Oxygen activation at the active site of a fungal lytic polysaccharide monooxygenase

por O’Dell, William B., Agarwal, Pratul K., Meilleur, Flora
Publicado no Angew Chem Int Ed Engl (2016)

Myelin Basic Protein Phospholipid Complexation Likely Competes with Deimination in Experimental Autoimmune Encephalomyelitis Mouse Model

por Valdivia, Anddre Osmar, Agarwal, Pratul K., Bhattacharya, Sanjoy K.
Publicado no ACS Omega (2020)

Event Detection and Sub-state Discovery from Bio-molecular Simulations Using Higher-Order Statistics: Application To Enzyme Adenylate Kinase

por Ramanathan, Arvind, Savol, Andrej J., Agarwal, Pratul K., Chennubhotla, Chakra S.
Publicado em 2012

Enzyme dynamics: Looking beyond a single structure

por Agarwal, Pratul K., Bernard, David N., Bafna, Khushboo, Doucet, Nicolas
Publicado no ChemCatChem (2020)

Conformational Sub-states and Populations in Enzyme Catalysis

por Agarwal, Pratul K., Doucet, Nicolas, Chennubhotla, Chakra, Ramanathan, Arvind, Narayanan, Chitra
Publicado no Methods Enzymol (2016)

Synthetic, switchable enzymes

por Norris, Vic, Krylov, Sergey N., Agarwal, Pratul K., White, Glenn J.
Publicado no J Mol Microbiol Biotechnol (2017)

Nucleotide substrate binding characterization in human pancreatic-type ribonucleases

por Bafna, Khushboo, Narayanan, Chitra, Chennubhotla, S. Chakra, Doucet, Nicolas, Agarwal, Pratul K.
Publicado no PLoS One (2019)

Applications of NMR and computational methodologies to study protein dynamics

por Narayanan, Chitra, Bafna, Khushboo, Roux, Louise D., Agarwal, Pratul K., Doucet, Nicolas
Publicado no Arch Biochem Biophys (2017)

Engineering Dynamic Surface Peptide Networks on Butyrylcholinesterase(G117H) for Enhanced Organophosphosphorus Anticholinesterase Catalysis

por Hester, Kirstin P., Bhattarai, Krishna, Jiang, Haobo, Agarwal, Pratul K., Pope, Carey
Publicado no Chem Res Toxicol (2019)

Altered APE1 activity on abasic ribonucleotides is mediated by changes in the nucleoside sugar pucker

por Hoitsma, Nicole M., Click, Timothy H., Agarwal, Pratul K., Freudenthal, Bret D.
Publicado no Comput Struct Biotechnol J (2021)

Discovering Conformational Sub-States Relevant to Protein Function

por Ramanathan, Arvind, Savol, Andrej J., Langmead, Christopher J., Agarwal, Pratul K., Chennubhotla, Chakra S.
Publicado em 2011

QAARM: quasi-anharmonic autoregressive model reveals molecular recognition pathways in ubiquitin

por Savol, Andrej J., Burger, Virginia M., Agarwal, Pratul K., Ramanathan, Arvind, Chennubhotla, Chakra S.
Publicado em 2011

Perturbation of the conformational dynamics of an active-site loop alters enzyme activity

por Gagné, Donald, French, Rachel L., Narayanan, Chitra, Simonović, Miljan, Agarwal, Pratul K., Doucet, Nicolas
Publicado no Structure (2015)

Tales of Dihydrofolate Binding to R67 Dihydrofolate Reductase

por Duff, Michael R., Chopra, Shaileja, Strader, Michael Brad, Agarwal, Pratul K., Howell, Elizabeth E.
Publicado no Biochemistry (2015)

Sequence-specific backbone resonance assignments and microsecond timescale molecular dynamics simulation of human eosinophil-derived neurotoxin

por Gagné, Donald, Narayanan, Chitra, Bafna, Khushboo, Charest, Laurie-Anne, Agarwal, Pratul K., Doucet, Nicolas
Publicado no Biomol NMR Assign (2017)