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Absolute protein binding free energy simulations for ligands with multiple poses, a thermodynamic path which avoids exhaustive enumeration of the poses

We propose a free energy calculation method for receptor-ligand binding, which have multiple binding poses that avoids exhaustive enumeration of the poses. For systems with multiple binding poses, the standard procedure is to enumerate orientations of the binding poses, restrain the ligand to each o...

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Bibliografiska uppgifter
I publikationen:J Comput Chem
Huvudupphovsmän: Sakae, Yoshitake, Zhang, Bin W., Levy, Ronald M., Deng, Nanjie
Materialtyp: Artigo
Språk:Inglês
Publicerad: 2019
Ämnen:
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC7140983/
https://ncbi.nlm.nih.gov/pubmed/31621932
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/jcc.26078
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