Large-Scale Identification of Ubiquitination Sites by Mass Spectrometry

Por Udeshi, Namrata D., Mertins, Philipp, Svinkina, Tanya, Carr, Steven A.
Publicado no Nat Protoc (2013)

Analysis of proteins and peptides on a chromatographic timescale by electron-transfer dissociation MS

Por Udeshi, Namrata D., Shabanowitz, Jeffrey, Hunt, Donald F., Rose, Kristie L.
Publicado no FEBS J (2007)

Methods for analyzing peptides and proteins on a chromatographic timescale by electron-transfer dissociation mass spectrometry

Por Udeshi, Namrata D, Compton, Philip D, Shabanowitz, Jeffrey, Hunt, Donald F, Rose, Kristie L
Publicado em 2008

Quantitative Assessment of Chromatin Immunoprecipitation Grade Antibodies Directed against Histone Modifications Reveals Patterns of Co-occurring Marks on Histone Protein Molecules

Por Peach, Sally E., Rudomin, Emily L., Udeshi, Namrata D., Carr, Steven A., Jaffe, Jacob D.
Publicado em 2012

Enrichment and Site Mapping of O-Linked N-Acetylglucosamine by a Combination of Chemical/Enzymatic Tagging, Photochemical Cleavage, and Electron Transfer Dissociation Mass Spectrom...

Por Wang, Zihao, Udeshi, Namrata D., O'Malley, Meaghan, Shabanowitz, Jeffrey, Hunt, Donald F., Hart, Gerald W.
Publicado em 2010

O-GlcNAcylation of the Plum pox virus capsid protein catalyzed by SECRET AGENT: characterization of O-GlcNAc sites by electron transfer dissociation mass spectrometry

Por Kim, Young-Cheon, Udeshi, Namrata D., Balsbaugh, Jeremy L., Shabanowitz, Jeffrey, Hunt, Donald F., Olszewski, Neil E.
Publicado em 2010

A PGC-1α-O-GlcNAc Transferase Complex Regulates FoxO Transcription Factor Activity in Response to Glucose

Por Housley, Michael P., Udeshi, Namrata D., Rodgers, Joseph T., Shabanowitz, Jeffrey, Puigserver, Pere, Hunt, Donald F., Hart, Gerald W.
Publicado em 2009

Refined Preparation and Use of Anti-diglycine Remnant (K-ε-GG) Antibody Enables Routine Quantification of 10,000s of Ubiquitination Sites in Single Proteomics Experiments

Por Udeshi, Namrata D., Svinkina, Tanya, Mertins, Philipp, Kuhn, Eric, Mani, D. R., Qiao, Jana W., Carr, Steven A.
Publicado em 2013

Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells

Por Han, Shuo, Udeshi, Namrata D., Deerinck, Thomas J., Svinkina, Tanya, Ellisman, Mark H., Carr, Steven A., Ting, Alice Y.
Publicado no Cell Chem Biol (2017)

Proteomic Mapping of Mitochondria in Living Cells via Spatially-Restricted Enzymatic Tagging

Por Rhee, Hyun-Woo, Zou, Peng, Udeshi, Namrata D., Martell, Jeffrey D., Mootha, Vamsi K., Carr, Steven A., Ting, Alice Y.
Publicado em 2013

Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation

Por Hung, Victoria, Lam, Stephanie S, Udeshi, Namrata D, Svinkina, Tanya, Guzman, Gaelen, Mootha, Vamsi K, Carr, Steven A, Ting, Alice Y
Publicado no eLife (2017)

Lysine trimethylation regulates 78-kDa glucose-regulated protein proteostasis during endoplasmic reticulum stress

Por Sieber, Jonas, Wieder, Nicolas, Ostrosky-Frid, Mauricio, Dvela-Levitt, Moran, Aygün, Ozan, Udeshi, Namrata D., Carr, Steven A., Greka, Anna
Publicado no J Biol Chem (2017)

Correction: Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation

Por Hung, Victoria, Lam, Stephanie S, Udeshi, Namrata D, Svinkina, Tanya, Guzman, Gaelen, Mootha, Vamsi K, Carr, Steven A, Ting, Alice Y
Publicado no eLife (2019)

O-GlcNAc Regulates FoxO Activation in Response to Glucose

Por Housley, Michael P., Rodgers, Joseph T., Udeshi, Namrata D., Kelly, Timothy J., Shabanowitz, Jeffrey, Hunt, Donald F., Puigserver, Pere, Hart, Gerald W.
Publicado em 2008

iTRAQ Labeling is Superior to mTRAQ for Quantitative Global Proteomics and Phosphoproteomics

Por Mertins, Philipp, Udeshi, Namrata D., Clauser, Karl R., Mani, DR, Patel, Jinal, Ong, Shao-en, Jaffe, Jacob D., Carr, Steven A.
Publicado em 2012

Methods for Quantification of in vivo Changes in Protein Ubiquitination following Proteasome and Deubiquitinase Inhibition

Por Udeshi, Namrata D., Mani, D. R., Eisenhaure, Thomas, Mertins, Philipp, Jaffe, Jacob D., Clauser, Karl R., Hacohen, Nir, Carr, Steven A.
Publicado em 2012

H2A.Z.1 mono-ubiquitylation antagonizes BRD2 to maintain poised chromatin in ESCs

Por Surface, Lauren E., Fields, Paul A., Subramanian, Vidya, Behmer, Russell, Udeshi, Namrata, Peach, Sally E., Jaffe, Jacob D., Boyer, Laurie A.
Publicado no Cell Rep (2016)

Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2

Por Hung, Victoria, Udeshi, Namrata D, Lam, Stephanie S, Loh, Ken H, Cox, Kurt J, Pedram, Kayvon, Carr, Steven A, Ting, Alice Y
Publicado no Nat Protoc (2016)

Lso2 is a conserved ribosome-bound protein required for translational recovery in yeast

Por Wang, Yinuo J., Vaidyanathan, Pavanapuresan P., Rojas-Duran, Maria F., Udeshi, Namrata D., Bartoli, Kristen M., Carr, Steven A., Gilbert, Wendy V.
Publicado no PLoS Biol (2018)

Extensive Crosstalk Between O-GlcNAcylation and Phosphorylation Regulates Cytokinesis

Por Wang, Zihao, Udeshi, Namrata D., Slawson, Chad, Compton, Philip D., Sakabe, Kaoru, Cheung, Win D., Shabanowitz, Jeffrey, Hunt, Donald F., Hart, Gerald W.
Publicado em 2010