Massive Amplification at an Unselected Locus Accompanies Complex Chromosomal Rearrangements in Yeast

od Thierry, Agnès, Khanna, Varun, Dujon, Bernard
Wydane w G3 (Bethesda) (2016)

Generation of gene-level resolution chromosome contact maps in bacteria and archaea

od Cockram, Charlotte, Thierry, Agnès, Koszul, Romain
Wydane w STAR Protoc (2021)

Megasatellites: a peculiar class of giant minisatellites in genes involved in cell adhesion and pathogenicity in Candida glabrata

od Thierry, Agnès, Bouchier, Christiane, Dujon, Bernard, Richard, Guy-Franck
Wydane 2008

MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut

od Marbouty, Martial, Thierry, Agnès, Millot, Gaël A, Koszul, Romain
Wydane w eLife (2021)

MetaTOR: A Computational Pipeline to Recover High-Quality Metagenomic Bins From Mammalian Gut Proximity-Ligation (meta3C) Libraries

od Baudry, Lyam, Foutel-Rodier, Théo, Thierry, Agnès, Koszul, Romain, Marbouty, Martial
Wydane w Front Genet (2019)

Serpentine: a flexible 2D binning method for differential Hi-C analysis

od Baudry, Lyam, Millot, Gaël A, Thierry, Agnes, Koszul, Romain, Scolari, Vittore F
Wydane w Bioinformatics (2020)

Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes

od Thierry, Agnès, Khanna, Varun, Créno, Sophie, Lafontaine, Ingrid, Ma, Laurence, Bouchier, Christiane, Dujon, Bernard
Wydane w Nat Commun (2015)

Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle

od Lazar‐Stefanita, Luciana, Scolari, Vittore F, Mercy, Guillaume, Muller, Héloise, Guérin, Thomas M, Thierry, Agnès, Mozziconacci, Julien, Koszul, Romain
Wydane w EMBO J (2017)

Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin

od Moreau, Pierrick, Cournac, Axel, Palumbo, Gianna Aurora, Marbouty, Martial, Mortaza, Shogofa, Thierry, Agnes, Cairo, Stefano, Lavigne, Marc, Koszul, Romain, Neuveut, Christine
Wydane w Nat Commun (2018)

The yeast Fun30 and human SMARCAD1 chromatin remodelers promote DNA end resection

od Costelloe, Thomas, Louge, Raphaël, Tomimatsu, Nozomi, Mukherjee, Bipasha, Martini, Emmanuelle, Khadaroo, Basheer, Dubois, Kenny, Wiegant, Wouter W., Thierry, Agnès, Burma, Sandeep, van Attikum, Haico, Llorente, Bertrand
Wydane 2012

Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi‐C

od Muller, Héloïse, Scolari, Vittore F, Agier, Nicolas, Piazza, Aurèle, Thierry, Agnès, Mercy, Guillaume, Descorps‐Declere, Stéphane, Lazar‐Stefanita, Luciana, Espeli, Olivier, Llorente, Bertrand, Fischer, Gilles, Mozziconacci, Julien, Koszul, Romain
Wydane w Mol Syst Biol (2018)

Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae

od Boyer, Jeanne, Badis, Gwenaël, Fairhead, Cécile, Talla, Emmanuel, Hantraye, Florence, Fabre, Emmanuelle, Fischer, Gilles, Hennequin, Christophe, Koszul, Romain, Lafontaine, Ingrid, Ozier-Kalogeropoulos, Odile, Ricchetti, Miria, Richard, Guy-Franck, Thierry, Agnès, Dujon, Bernard
Wydane 2004

FACT mediates cohesin function on chromatin

od Garcia-Luis, Jonay, Lazar-Stefanita, Luciana, Gutierrez-Escribano, Pilar, Thierry, Agnes, Cournac, Axel, García, Alicia, González, Sara, Sánchez, Mar, Jarmuz, Adam, Montoya, Alex, Dore, Marian, Kramer, Holger, Karimi, Mohammad Mehdi, Antequera, Francisco, Koszul, Romain, Aragon, Luis
Wydane w Nat Struct Mol Biol (2019)

3D organization of synthetic and scrambled chromosomes

od Mercy, Guillaume, Mozziconacci, Julien, Scolari, Vittore F., Yang, Kun, Zhao, Guanghou, Thierry, Agnès, Luo, Yisha, Mitchell, Leslie A., Shen, Michael, Shen, Yue, Walker, Roy, Zhang, Weimin, Wu, Yi, Xie, Ze-xiong, Luo, Zhouqing, Cai, Yizhi, Dai, Junbiao, Yang, Huanming, Yuan, Ying-Jin, Boeke, Jef D., Bader, Joel S., Muller, Héloïse, Koszul, Romain
Wydane w Science (2017)

Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization

od Louis, Véronique Leh, Despons, Laurence, Friedrich, Anne, Martin, Tiphaine, Durrens, Pascal, Casarégola, Serge, Neuvéglise, Cécile, Fairhead, Cécile, Marck, Christian, Cruz, José A., Straub, Marie-Laure, Kugler, Valérie, Sacerdot, Christine, Uzunov, Zlatyo, Thierry, Agnes, Weiss, Stéphanie, Bleykasten, Claudine, De Montigny, Jacky, Jacques, Noemie, Jung, Paul, Lemaire, Marc, Mallet, Sandrine, Morel, Guillaume, Richard, Guy-Franck, Sarkar, Anasua, Savel, Guilhem, Schacherer, Joseph, Seret, Marie-Line, Talla, Emmanuel, Samson, Gaelle, Jubin, Claire, Poulain, Julie, Vacherie, Benoît, Barbe, Valérie, Pelletier, Eric, Sherman, David J., Westhof, Eric, Weissenbach, Jean, Baret, Philippe V., Wincker, Patrick, Gaillardin, Claude, Dujon, Bernard, Souciet, Jean-Luc
Wydane 2012

Comparative genomics of protoploid Saccharomycetaceae

od Souciet, Jean-Luc, Dujon, Bernard, Gaillardin, Claude, Johnston, Mark, Baret, Philippe V., Cliften, Paul, Sherman, David J., Weissenbach, Jean, Westhof, Eric, Wincker, Patrick, Jubin, Claire, Poulain, Julie, Barbe, Valérie, Ségurens, Béatrice, Artiguenave, François, Anthouard, Véronique, Vacherie, Benoit, Val, Marie-Eve, Fulton, Robert S., Minx, Patrick, Wilson, Richard, Durrens, Pascal, Jean, Géraldine, Marck, Christian, Martin, Tiphaine, Nikolski, Macha, Rolland, Thomas, Seret, Marie-Line, Casarégola, Serge, Despons, Laurence, Fairhead, Cécile, Fischer, Gilles, Lafontaine, Ingrid, Leh, Véronique, Lemaire, Marc, de Montigny, Jacky, Neuvéglise, Cécile, Thierry, Agnès, Blanc-Lenfle, Isabelle, Bleykasten, Claudine, Diffels, Julie, Fritsch, Emilie, Frangeul, Lionel, Goëffon, Adrien, Jauniaux, Nicolas, Kachouri-Lafond, Rym, Payen, Célia, Potier, Serge, Pribylova, Lenka, Ozanne, Christophe, Richard, Guy-Franck, Sacerdot, Christine, Straub, Marie-Laure, Talla, Emmanuel
Wydane 2009

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest

od Kunze, Gotthard, Gaillardin, Claude, Czernicka, Małgorzata, Durrens, Pascal, Martin, Tiphaine, Böer, Erik, Gabaldón, Toni, Cruz, Jose A, Talla, Emmanuel, Marck, Christian, Goffeau, André, Barbe, Valérie, Baret, Philippe, Baronian, Keith, Beier, Sebastian, Bleykasten, Claudine, Bode, Rüdiger, Casaregola, Serge, Despons, Laurence, Fairhead, Cécile, Giersberg, Martin, Gierski, Przemysław Piotr, Hähnel, Urs, Hartmann, Anja, Jankowska, Dagmara, Jubin, Claire, Jung, Paul, Lafontaine, Ingrid, Leh-Louis, Véronique, Lemaire, Marc, Marcet-Houben, Marina, Mascher, Martin, Morel, Guillaume, Richard, Guy-Franck, Riechen, Jan, Sacerdot, Christine, Sarkar, Anasua, Savel, Guilhem, Schacherer, Joseph, Sherman, David J, Stein, Nils, Straub, Marie-Laure, Thierry, Agnès, Trautwein-Schult, Anke, Vacherie, Benoit, Westhof, Eric, Worch, Sebastian, Dujon, Bernard, Souciet, Jean-Luc, Wincker, Patrick, Scholz, Uwe, Neuvéglise, Cécile
Wydane 2014