Fusion and Fission of Genes Define a Metric between Fungal Genomes

Por Durrens, Pascal, Nikolski, Macha, Sherman, David
Publicado em 2008

Identification of conserved gene clusters in multiple genomes based on synteny and homology

Por Sarkar, Anasua, Soueidan, Hayssam, Nikolski, Macha
Publicado em 2011

Finding and identifying the viral needle in the metagenomic haystack: trends and challenges

Por Soueidan, Hayssam, Schmitt, Louise-Amélie, Candresse, Thierry, Nikolski, Macha
Publicado no Front Microbiol (2015)

Génolevures: comparative genomics and molecular evolution of hemiascomycetous yeasts

Por Sherman, David, Durrens, Pascal, Beyne, Emmanuelle, Nikolski, Macha, Souciet, Jean-Luc
Publicado em 2004

Génolevures complete genomes provide data and tools for comparative genomics of hemiascomycetous yeasts

Por Sherman, David, Durrens, Pascal, Iragne, Florian, Beyne, Emmanuelle, Nikolski, Macha, Souciet, Jean-Luc
Publicado em 2006

Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes

Por Sherman, David J., Martin, Tiphaine, Nikolski, Macha, Cayla, Cyril, Souciet, Jean-Luc, Durrens, Pascal
Publicado em 2009

MICADo – Looking for Mutations in Targeted PacBio Cancer Data: An Alignment-Free Method

Por Rudewicz, Justine, Soueidan, Hayssam, Uricaru, Raluca, Bonnefoi, Hervé, Iggo, Richard, Bergh, Jonas, Nikolski, Macha
Publicado no Front Genet (2016)

Finishing bacterial genome assemblies with Mix

Por Soueidan, Hayssam, Maurier, Florence, Groppi, Alexis, Sirand-Pugnet, Pascal, Tardy, Florence, Citti, Christine, Dupuy, Virginie, Nikolski, Macha
Publicado em 2013

MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles

Por Ferry-Dumazet, Hélène, Gil, Laurent, Deborde, Catherine, Moing, Annick, Bernillon, Stéphane, Rolin, Dominique, Nikolski, Macha, de Daruvar, Antoine, Jacob, Daniel
Publicado em 2011

Data standards can boost metabolomics research, and if there is a will, there is a way

Por Rocca-Serra, Philippe, Salek, Reza M., Arita, Masanori, Correa, Elon, Dayalan, Saravanan, Gonzalez-Beltran, Alejandra, Ebbels, Tim, Goodacre, Royston, Hastings, Janna, Haug, Kenneth, Koulman, Albert, Nikolski, Macha, Oresic, Matej, Sansone, Susanna-Assunta, Schober, Daniel, Smith, James, Steinbeck, Christoph, Viant, Mark R., Neumann, Steffen
Publicado no Metabolomics (2015)

Draft Genome Sequences of Mycoplasma auris and Mycoplasma yeatsii, Two Species of the Ear Canal of Caprinae

Por Dordet-Frisoni, Emilie, Baranowski, Eric, Barré, Aurélien, Blanchard, Alain, Breton, Marc, Couture, Carole, Dupuy, Virginie, Gaurivaud, Patrice, Jacob, Daniel, Lemaitre, Claire, Manso-Silván, Lucía, Nikolski, Macha, Nouvel, Laurent-Xavier, Poumarat, François, Sirand-Pugnet, Pascal, Thébault, Patricia, Theil, Sébastien, Thiaucourt, François, Citti, Christine, Tardy, Florence
Publicado em 2013

Draft Genome Sequences of Mycoplasma alkalescens, Mycoplasma arginini, and Mycoplasma bovigenitalium, Three Species with Equivocal Pathogenic Status for Cattle

Por Manso-Silván, Lucía, Tardy, Florence, Baranowski, Eric, Barré, Aurélien, Blanchard, Alain, Breton, Marc, Couture, Carole, Citti, Christine, Dordet-Frisoni, Emilie, Dupuy, Virginie, Gaurivaud, Patrice, Jacob, Daniel, Lemaitre, Claire, Nikolski, Macha, Nouvel, Laurent-Xavier, Poumarat, François, Thébault, Patricia, Theil, Sébastien, Thiaucourt, François, Sirand-Pugnet, Pascal
Publicado em 2013

Complete Genome Sequence of Mycoplasma putrefaciens Strain 9231, One of the Agents of Contagious Agalactia in Goats

Por Dupuy, Virginie, Sirand-Pugnet, Pascal, Baranowski, Eric, Barré, Aurélien, Breton, Marc, Couture, Carole, Dordet-Frisoni, Emilie, Gaurivaud, Patrice, Jacob, Daniel, Lemaitre, Claire, Manso-Silván, Lucía, Nikolski, Macha, Nouvel, Laurent-Xavier, Poumarat, François, Tardy, Florence, Thébault, Patricia, Theil, Sébastien, Citti, Christine, Blanchard, Alain, Thiaucourt, François
Publicado em 2013

Clinical and genomic analysis of a randomised phase II study evaluating anastrozole and fulvestrant in postmenopausal patients treated for large operable or locally advanced hormon...

Por Quenel-Tueux, Nathalie, Debled, Marc, Rudewicz, Justine, MacGrogan, Gaetan, Pulido, Marina, Mauriac, Louis, Dalenc, Florence, Bachelot, Thomas, Lortal, Barbara, Breton-Callu, Christelle, Madranges, Nicolas, de Lara, Christine Tunon, Fournier, Marion, Bonnefoi, Hervé, Soueidan, Hayssam, Nikolski, Macha, Gros, Audrey, Daly, Catherine, Wood, Henry, Rabbitts, Pamela, Iggo, Richard
Publicado no Br J Cancer (2015)

Minimum Information About a Simulation Experiment (MIASE)

Por Waltemath, Dagmar, Adams, Richard, Beard, Daniel A., Bergmann, Frank T., Bhalla, Upinder S., Britten, Randall, Chelliah, Vijayalakshmi, Cooling, Michael T., Cooper, Jonathan, Crampin, Edmund J., Garny, Alan, Hoops, Stefan, Hucka, Michael, Hunter, Peter, Klipp, Edda, Laibe, Camille, Miller, Andrew K., Moraru, Ion, Nickerson, David, Nielsen, Poul, Nikolski, Macha, Sahle, Sven, Sauro, Herbert M., Schmidt, Henning, Snoep, Jacky L., Tolle, Dominic, Wolkenhauer, Olaf, Le Novère, Nicolas
Publicado em 2011

COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

Por Salek, Reza M., Neumann, Steffen, Schober, Daniel, Hummel, Jan, Billiau, Kenny, Kopka, Joachim, Correa, Elon, Reijmers, Theo, Rosato, Antonio, Tenori, Leonardo, Turano, Paola, Marin, Silvia, Deborde, Catherine, Jacob, Daniel, Rolin, Dominique, Dartigues, Benjamin, Conesa, Pablo, Haug, Kenneth, Rocca-Serra, Philippe, O’Hagan, Steve, Hao, Jie, van Vliet, Michael, Sysi-Aho, Marko, Ludwig, Christian, Bouwman, Jildau, Cascante, Marta, Ebbels, Timothy, Griffin, Julian L., Moing, Annick, Nikolski, Macha, Oresic, Matej, Sansone, Susanna-Assunta, Viant, Mark R., Goodacre, Royston, Günther, Ulrich L., Hankemeier, Thomas, Luchinat, Claudio, Walther, Dirk, Steinbeck, Christoph
Publicado no Metabolomics (2015)

Comparative genomics of protoploid Saccharomycetaceae

Por Souciet, Jean-Luc, Dujon, Bernard, Gaillardin, Claude, Johnston, Mark, Baret, Philippe V., Cliften, Paul, Sherman, David J., Weissenbach, Jean, Westhof, Eric, Wincker, Patrick, Jubin, Claire, Poulain, Julie, Barbe, Valérie, Ségurens, Béatrice, Artiguenave, François, Anthouard, Véronique, Vacherie, Benoit, Val, Marie-Eve, Fulton, Robert S., Minx, Patrick, Wilson, Richard, Durrens, Pascal, Jean, Géraldine, Marck, Christian, Martin, Tiphaine, Nikolski, Macha, Rolland, Thomas, Seret, Marie-Line, Casarégola, Serge, Despons, Laurence, Fairhead, Cécile, Fischer, Gilles, Lafontaine, Ingrid, Leh, Véronique, Lemaire, Marc, de Montigny, Jacky, Neuvéglise, Cécile, Thierry, Agnès, Blanc-Lenfle, Isabelle, Bleykasten, Claudine, Diffels, Julie, Fritsch, Emilie, Frangeul, Lionel, Goëffon, Adrien, Jauniaux, Nicolas, Kachouri-Lafond, Rym, Payen, Célia, Potier, Serge, Pribylova, Lenka, Ozanne, Christophe, Richard, Guy-Franck, Sacerdot, Christine, Straub, Marie-Laure, Talla, Emmanuel
Publicado em 2009