The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

Por Marcet-Houben, Marina, Gabaldón, Toni
Publicado em 2009

TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees

Por Marcet-Houben, Marina, Gabaldón, Toni
Publicado em 2011

Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage

Por Marcet-Houben, Marina, Gabaldón, Toni
Publicado no PLoS Biol (2015)

Horizontal acquisition of toxic alkaloid synthesis in a clade of plant associated fungi

Por Marcet-Houben, Marina, Gabaldón, Toni
Publicado no Fungal Genet Biol (2016)

Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence

Por Marcet-Houben, Marina, Marceddu, Giuseppe, Gabaldón, Toni
Publicado em 2009

Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi

Por Capella-Gutiérrez, Salvador, Marcet-Houben, Marina, Gabaldón, Toni
Publicado em 2012

Towards reconstructing a metabolic tree of life

Por Marcet-Houben, Marina, Puigbò, Pere, Romeu, Antoni, Garcia-Vallve, Santiago
Publicado em 2007

Phylogenetic analysis of homologous fatty acid synthase and polyketide synthase involved in aflatoxin biosynthesis

Por Marcet-Houben, Marina, Cabré, Maria, Paternáin, José L, Romeu, Antoni
Publicado em 2008

Contrasting Genomic Diversity in Two Closely Related Postharvest Pathogens: Penicillium digitatum and Penicillium expansum

Por Julca, Irene, Droby, Samir, Sela, Noa, Marcet-Houben, Marina, Gabaldón, Toni
Publicado no Genome Biol Evol (2015)

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome

Por Huerta-Cepas, Jaime, Capella-Gutiérrez, Salvador, Pryszcz, Leszek P., Marcet-Houben, Marina, Gabaldón, Toni
Publicado em 2014

The Schistosoma mansoni phylome: using evolutionary genomics to gain insight into a parasite’s biology

Por Silva, Larissa Lopes, Marcet-Houben, Marina, Nahum, Laila Alves, Zerlotini, Adhemar, Gabaldón, Toni, Oliveira, Guilherme
Publicado em 2012

Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum

Por Banani, Houda, Marcet-Houben, Marina, Ballester, Ana-Rosa, Abbruscato, Pamela, González-Candelas, Luis, Gabaldón, Toni, Spadaro, Davide
Publicado no BMC Genomics (2016)

PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions

Por Huerta-Cepas, Jaime, Capella-Gutierrez, Salvador, Pryszcz, Leszek P., Denisov, Ivan, Kormes, Diego, Marcet-Houben, Marina, Gabaldón, Toni
Publicado em 2011

Regulation of Candida glabrata oxidative stress resistance is adapted to host environment

Por Roetzer, Andreas, Klopf, Eva, Gratz, Nina, Marcet-Houben, Marina, Hiller, Ekkehard, Rupp, Steffen, Gabaldón, Toni, Kovarik, Pavel, Schüller, Christoph
Publicado em 2011

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus

Por Marcet-Houben, Marina, Ballester, Ana-Rosa, de la Fuente, Beatriz, Harries, Eleonora, Marcos, Jose F, González-Candelas, Luis, Gabaldón, Toni
Publicado em 2012

The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution

Por Traeger, Stefanie, Altegoer, Florian, Freitag, Michael, Gabaldon, Toni, Kempken, Frank, Kumar, Abhishek, Marcet-Houben, Marina, Pöggeler, Stefanie, Stajich, Jason E., Nowrousian, Minou
Publicado em 2013

Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream

Por Boeckmann, Brigitte, Marcet-Houben, Marina, Rees, Jonathan A., Forslund, Kristoffer, Huerta-Cepas, Jaime, Muffato, Matthieu, Yilmaz, Pelin, Xenarios, Ioannis, Bork, Peer, Lewis, Suzanna E., Gabaldón, Toni
Publicado no Genome Biol Evol (2015)

Genome sequence of the olive tree, Olea europaea

Por Cruz, Fernando, Julca, Irene, Gómez-Garrido, Jèssica, Loska, Damian, Marcet-Houben, Marina, Cano, Emilio, Galán, Beatriz, Frias, Leonor, Ribeca, Paolo, Derdak, Sophia, Gut, Marta, Sánchez-Fernández, Manuel, García, Jose Luis, Gut, Ivo G., Vargas, Pablo, Alioto, Tyler S., Gabaldón, Toni
Publicado no Gigascience (2016)

Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina)

Por Schwartze, Volker U., Winter, Sascha, Shelest, Ekaterina, Marcet-Houben, Marina, Horn, Fabian, Wehner, Stefanie, Linde, Jörg, Valiante, Vito, Sammeth, Michael, Riege, Konstantin, Nowrousian, Minou, Kaerger, Kerstin, Jacobsen, Ilse D., Marz, Manja, Brakhage, Axel A., Gabaldón, Toni, Böcker, Sebastian, Voigt, Kerstin
Publicado em 2014

Complete DNA Sequence of Kuraishia capsulata Illustrates Novel Genomic Features among Budding Yeasts (Saccharomycotina)

Por Morales, Lucia, Noel, Benjamin, Porcel, Betina, Marcet-Houben, Marina, Hullo, Marie-Francoise, Sacerdot, Christine, Tekaia, Fredj, Leh-Louis, Véronique, Despons, Laurence, Khanna, Varun, Aury, Jean-Marc, Barbe, Valérie, Couloux, Arnaud, Labadie, Karen, Pelletier, Eric, Souciet, Jean-Luc, Boekhout, Teun, Gabaldon, Toni, Wincker, Patrick, Dujon, Bernard
Publicado em 2013