Expanding the World of Marine Bacterial and Archaeal Clades

بواسطة Yilmaz, Pelin, Yarza, Pablo, Rapp, Josephine Z., Glöckner, Frank O.
الحاوية / القاعدة Front Microbiol (2016)

SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees

بواسطة Beccati, Alan, Gerken, Jan, Quast, Christian, Yilmaz, Pelin, Glöckner, Frank Oliver
الحاوية / القاعدة BMC Bioinformatics (2017)

Phylogeny-aware identification and correction of taxonomically mislabeled sequences

بواسطة Kozlov, Alexey M., Zhang, Jiajie, Yilmaz, Pelin, Glöckner, Frank Oliver, Stamatakis, Alexandros
الحاوية / القاعدة Nucleic Acids Res (2016)

MetaBar - a tool for consistent contextual data acquisition and standards compliant submission

بواسطة Hankeln, Wolfgang, Buttigieg, Pier Luigi, Fink, Dennis, Kottmann, Renzo, Yilmaz, Pelin, Glöckner, Frank Oliver
منشور في 2010

Meeting report: GSC M5 roundtable at the 13th International Society for Microbial Ecology meeting in Seattle, WA, USA August 22-27, 2010

بواسطة Gilbert, Jack A., Meyer, Folker, Knight, Rob, Field, Dawn, Kyrpides, Nikos, Yilmaz, Pelin, Wooley, John
منشور في 2010

MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources

بواسطة Tsesmetzis, Nicolas, Yilmaz, Pelin, Marks, Peter C., Kyrpides, Nikos C., Head, Ian M., Lomans, Bart P.
الحاوية / القاعدة Stand Genomic Sci (2016)

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

بواسطة Quast, Christian, Pruesse, Elmar, Yilmaz, Pelin, Gerken, Jan, Schweer, Timmy, Yarza, Pablo, Peplies, Jörg, Glöckner, Frank Oliver
منشور في 2013

Ecogenomic Perspectives on Domains of Unknown Function: Correlation-Based Exploration of Marine Metagenomes

بواسطة Buttigieg, Pier Luigi, Hankeln, Wolfgang, Kostadinov, Ivaylo, Kottmann, Renzo, Yilmaz, Pelin, Duhaime, Melissa Beth, Glöckner, Frank Oliver
منشور في 2013

Anoxygenic Photosynthesis Controls Oxygenic Photosynthesis in a Cyanobacterium from a Sulfidic Spring

بواسطة Klatt, Judith M., Al-Najjar, Mohammad A. A., Yilmaz, Pelin, Lavik, Gaute, de Beer, Dirk, Polerecky, Lubos
الحاوية / القاعدة Appl Environ Microbiol (2015)

Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research

بواسطة Rambold, Gerhard, Yilmaz, Pelin, Harjes, Janno, Klaster, Sabrina, Sanz, Veronica, Link, Anton, Glöckner, Frank Oliver, Triebel, Dagmar
الحاوية / القاعدة Database (Oxford) (2019)

Megx.net: integrated database resource for marine ecological genomics

بواسطة Kottmann, Renzo, Kostadinov, Ivalyo, Duhaime, Melissa Beth, Buttigieg, Pier Luigi, Yilmaz, Pelin, Hankeln, Wolfgang, Waldmann, Jost, Glöckner, Frank Oliver
منشور في 2010

Plant specimen contextual data consensus

بواسطة Hoopen, Petra ten, Walls, Ramona L., Cannon, Ethalinda KS, Cochrane, Guy, Cole, James, Johnston, Anjanette, Karsch-Mizrachi, Ilene, Yilmaz, Pelin
الحاوية / القاعدة Gigascience (2016)

CDinFusion – Submission-Ready, On-Line Integration of Sequence and Contextual Data

بواسطة Hankeln, Wolfgang, Wendel, Norma Johanna, Gerken, Jan, Waldmann, Jost, Buttigieg, Pier Luigi, Kostadinov, Ivaylo, Kottmann, Renzo, Yilmaz, Pelin, Glöckner, Frank Oliver
منشور في 2011

Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework

بواسطة Henderson, Gemma, Yilmaz, Pelin, Kumar, Sandeep, Forster, Robert J., Kelly, William J., Leahy, Sinead C., Guan, Le Luo, Janssen, Peter H.
الحاوية / القاعدة PeerJ (2019)

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

بواسطة Yilmaz, Pelin, Parfrey, Laura Wegener, Yarza, Pablo, Gerken, Jan, Pruesse, Elmar, Quast, Christian, Schweer, Timmy, Peplies, Jörg, Ludwig, Wolfgang, Glöckner, Frank Oliver
منشور في 2014

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

بواسطة Panzer, Katrin, Yilmaz, Pelin, Weiß, Michael, Reich, Lothar, Richter, Michael, Wiese, Jutta, Schmaljohann, Rolf, Labes, Antje, Imhoff, Johannes F., Glöckner, Frank Oliver, Reich, Marlis
الحاوية / القاعدة PLoS One (2015)

The genomic standards consortium: bringing standards to life for microbial ecology

بواسطة Yilmaz, Pelin, Gilbert, Jack A, Knight, Rob, Amaral-Zettler, Linda, Karsch-Mizrachi, Ilene, Cochrane, Guy, Nakamura, Yasukazu, Sansone, Susanna-Assunta, Glöckner, Frank Oliver, Field, Dawn
منشور في 2011

Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream

بواسطة Boeckmann, Brigitte, Marcet-Houben, Marina, Rees, Jonathan A., Forslund, Kristoffer, Huerta-Cepas, Jaime, Muffato, Matthieu, Yilmaz, Pelin, Xenarios, Ioannis, Bork, Peer, Lewis, Suzanna E., Gabaldón, Toni
الحاوية / القاعدة Genome Biol Evol (2015)

Versatile cyanobacteria control the timing and extent of sulfide production in a Proterozoic analog microbial mat

بواسطة Klatt, Judith M., Gomez-Saez, Gonzalo V., Meyer, Steffi, Ristova, Petra Pop, Yilmaz, Pelin, Granitsiotis, Michael S., Macalady, Jennifer L., Lavik, Gaute, Polerecky, Lubos, Bühring, Solveig I.
الحاوية / القاعدة ISME J (2020)

Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets

بواسطة Morrison, Norman, Hancock, David, Hirschman, Lynette, Dawyndt, Peter, Verslyppe, Bert, Kyrpides, Nikos, Kottmann, Renzo, Yilmaz, Pelin, Glöckner, Frank Oliver, Grethe, Jeff, Booth, Tim, Sterk, Peter, Nenadic, Goran, Field, Dawn
منشور في 2011