Making Workshops Work: Insights from EDAMAME

por Taroni, Jaclyn N.
Publicado no mSystems (2019)

The mechanistic implications of gene expression studies in SSc: Insights from Systems Biology

por Taroni, Jaclyn N., Mahoney, J. Matthew, Whitfield, Michael L.
Publicado no Curr Treatm Opt Rheumatol (2017)

A Functional Genomic Meta-Analysis of Clinical Trials in Systemic Sclerosis: Toward Precision Medicine and Combination Therapy

por Taroni, Jaclyn N., Martyanov, Viktor, Mahoney, J. Matthew, Whitfield, Michael L.
Publicado no J Invest Dermatol (2016)

Integrated machine learning pipeline for aberrant biomarker enrichment (i-mAB): characterizing clusters of differentiation within a compendium of systemic lupus erythematosus patie...

por Le, Trang T., Blackwood*, Nigel O., Taroni, Jaclyn N., Fu, Weixuan, Breitenstein, Matthew K.
Publicado no AMIA Annu Symp Proc (2018)

MultiPLIER: a transfer learning framework for transcriptomics reveals systemic features of rare disease

por Taroni, Jaclyn N., Grayson, Peter C., Hu, Qiwen, Eddy, Sean, Kretzler, Matthias, Merkel, Peter A., Greene, Casey S.
Publicado no Cell Syst (2019)

A Multimodal Strategy Used by a Large c-di-GMP Network

por Dahlstrom, Kurt M., Collins, Alan J., Doing, Georgia, Taroni, Jaclyn N., Gauvin, Timothy J., Greene, Casey S., Hogan, Deborah A., O'Toole, George A.
Publicado no J Bacteriol (2018)

Integrative Analysis Identifies Candidate Tumor Microenvironment and Intracellular Signaling Pathways that Define Tumor Heterogeneity in NF1

por Banerjee, Jineta, Allaway, Robert J, Taroni, Jaclyn N, Baker, Aaron, Zhang, Xiaochun, Moon, Chang In, Pratilas, Christine A, Blakeley, Jaishri O, Guinney, Justin, Hirbe, Angela, Greene, Casey S, Gosline, Sara JC
Publicado no Genes (Basel) (2020)

Stress granules and RNA processing bodies are novel autoantibody targets in systemic sclerosis

por Johnson, Michael E., Grassetti, Andrew V., Taroni, Jaclyn N., Lyons, Shawn M., Schweppe, Devin, Gordon, Jessica K., Spiera, Robert F., Lafyatis, Robert, Anderson, Paul J., Gerber, Scott A., Whitfield, Michael L.
Publicado no Arthritis Res Ther (2016)

Metabolic pathways and immunometabolism in rare kidney diseases

por Grayson, Peter C, Eddy, Sean, Taroni, Jaclyn N, Lightfoot, Yaíma L, Mariani, Laura, Parikh, Hemang, Lindenmeyer, Maja T, Ju, Wenjun, Greene, Casey S, Godfrey, Brad, Cohen, Clemens D, Krischer, Jeffrey, Kretzler, Matthias, Merkel, Peter A
Publicado no Ann Rheum Dis (2018)

A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

por Taroni, Jaclyn N., Greene, Casey S., Martyanov, Viktor, Wood, Tammara A., Christmann, Romy B., Farber, Harrison W., Lafyatis, Robert A., Denton, Christopher P., Hinchcliff, Monique E., Pioli, Patricia A., Mahoney, J. Matthew, Whitfield, Michael L.
Publicado no Genome Med (2017)

annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions

por Gaonkar, Krutika S., Marini, Federico, Rathi, Komal S., Jain, Payal, Zhu, Yuankun, Chimicles, Nicholas A., Brown, Miguel A., Naqvi, Ammar S., Zhang, Bo, Storm, Phillip B., Maris, John M., Raman, Pichai, Resnick, Adam C., Strauch, Konstantin, Taroni, Jaclyn N., Rokita, Jo Lynne
Publicado no BMC Bioinformatics (2020)

Molecular characterization of systemic sclerosis esophageal pathology identifies inflammatory and proliferative signatures

por Taroni, Jaclyn N., Martyanov, Viktor, Huang, Chiang-Ching, Mahoney, J. Matthew, Hirano, Ikuo, Shetuni, Brandon, Yang, Guang-Yu, Brenner, Darren, Jung, Barbara, Wood, Tammara A., Bhattacharyya, Swati, Almagor, Orit, Lee, Jungwha, Sirajuddin, Arlene, Varga, John, Chang, Rowland W., Whitfield, Michael L., Hinchcliff, Monique
Publicado no Arthritis Res Ther (2015)

Mycophenolate Mofetil Treatment of Systemic Sclerosis Reduces Myeloid Cell Numbers and Attenuates the Inflammatory Gene Signature in Skin

por Hinchcliff, Monique, Toledo, Diana M., Taroni, Jaclyn N., Wood, Tammara A., Franks, Jennifer M., Ball, Michael S., Hoffmann, Aileen, Amin, Sapna M., Tan, Ainah U., Tom, Kevin, Nesbeth, Yolanda, Lee, Jungwha, Ma, Madeleine, Aren, Kathleen, Carns, Mary A., Pioli, Patricia A., Whitfield, Michael L.
Publicado no J Invest Dermatol (2018)