DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells

von Song, Lingyun, Crawford, Gregory E.
Veröffentlicht 2010

Repair of partial atrioventricular canal defect in adult patients: two-year follow-up outcomes of a retrospective study

von Song, Lingyun, Ling, Yunfei, An, Qi
Veröffentlicht in J Cardiothorac Surg (2019)

DNase-seq predicts regions of rotational nucleosome stability across diverse human cell types

von Winter, Deborah R., Song, Lingyun, Mukherjee, Sayan, Furey, Terrence S., Crawford, Gregory E.
Veröffentlicht 2013

Open chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function

von Browne, James A., Yang, Rui, Song, Lingyun, Crawford, Gregory E., Leir, Shih-Hsing, Harris, Ann
Veröffentlicht in Mol Hum Reprod (2014)

Engineered Single-Chain, Antiparallel, Coiled Coil Mimics the MerR Metal Binding Site

von Song, Lingyun, Caguiat, Jonathan, Li, Zhongrui, Shokes, Jacob, Scott, Robert A., Olliff, Lynda, Summers, Anne O.
Veröffentlicht 2004

Genome-wide identification of regulatory elements in Sertoli cells

von Maatouk, Danielle M., Natarajan, Anirudh, Shibata, Yoichiro, Song, Lingyun, Crawford, Gregory E., Ohler, Uwe, Capel, Blanche
Veröffentlicht in Development (2017)

Microbiota regulate intestinal epithelial gene expression by suppressing the transcription factor Hepatocyte nuclear factor 4 alpha

von Davison, James M., Lickwar, Colin R., Song, Lingyun, Breton, Ghislain, Crawford, Gregory E., Rawls, John F.
Veröffentlicht in Genome Res (2017)

Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

von Lee, Dongwon, Kapoor, Ashish, Safi, Alexias, Song, Lingyun, Halushka, Marc K., Crawford, Gregory E., Chakravarti, Aravinda
Veröffentlicht in Genome Res (2018)

Notch signaling genes: Myogenic DNA hypomethylation and 5-hydroxymethylcytosine

von Terragni, Jolyon, Zhang, Guoqiang, Sun, Zhiyi, Pradhan, Sriharsa, Song, Lingyun, Crawford, Gregory E, Lacey, Michelle, Ehrlich, Melanie
Veröffentlicht 2014

Interactions of Chromatin Context, Binding Site Sequence Content, and Sequence Evolution in Stress-Induced p53 Occupancy and Transactivation

von Su, Dan, Wang, Xuting, Campbell, Michelle R., Song, Lingyun, Safi, Alexias, Crawford, Gregory E., Bell, Douglas A.
Veröffentlicht in PLoS Genet (2015)

A Genome-Wide Analysis of Open Chromatin in Human Epididymis Epithelial Cells Reveals Candidate Regulatory Elements for Genes Coordinating Epididymal Function

von Bischof, Jared M., Gillen, Austin E., Song, Lingyun, Gosalia, Nehal, London, Darin, Furey, Terrence S., Crawford, Gregory E., Harris, Ann
Veröffentlicht 2013

DNaseI hypersensitivity at gene-poor, FSH dystrophy-linked 4q35.2

von Xu, Xueqing, Tsumagari, Koji, Sowden, Janet, Tawil, Rabi, Boyle, Alan P., Song, Lingyun, Furey, Terrence S., Crawford, Gregory E., Ehrlich, Melanie
Veröffentlicht 2009

Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions

von Sheffield, Nathan C., Thurman, Robert E., Song, Lingyun, Safi, Alexias, Stamatoyannopoulos, John A., Lenhard, Boris, Crawford, Gregory E., Furey, Terrence S.
Veröffentlicht 2013

Identification and requirements of enhancers that direct gene expression during zebrafish fin regeneration

von Thompson, John D., Ou, Jianhong, Lee, Nutishia, Shin, Kwangdeok, Cigliola, Valentina, Song, Lingyun, Crawford, Gregory E., Kang, Junsu, Poss, Kenneth D.
Veröffentlicht in Development (2020)

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

von Boyle, Alan P., Song, Lingyun, Lee, Bum-Kyu, London, Darin, Keefe, Damian, Birney, Ewan, Iyer, Vishwanath R., Crawford, Gregory E., Furey, Terrence S.
Veröffentlicht 2011

Site-specific silencing of regulatory elements as a mechanism of X-inactivation

von Calabrese, J. Mauro, Sun, Wei, Song, Lingyun, Mugford, Joshua W., Williams, Lucy, Yee, Della, Starmer, Joshua, Mieczkowski, Piotr, Crawford, Gregory E., Magnuson, Terry
Veröffentlicht 2012

DNA methylation and differentiation: HOX genes in muscle cells

von Tsumagari, Koji, Baribault, Carl, Terragni, Jolyon, Chandra, Sruti, Renshaw, Chloe, Sun, Zhiyi, Song, Lingyun, Crawford, Gregory E, Pradhan, Sriharsa, Lacey, Michelle, Ehrlich, Melanie
Veröffentlicht 2013

Chromatin Accessibility Mapping Identifies Mediators of Basal Transcription and Retinoid-Induced Repression of OTX2 in Medulloblastoma

von Wortham, Matthew, Guo, Changcun, Zhang, Monica, Song, Lingyun, Lee, Bum-Kyu, Iyer, Vishwanath R., Furey, Terrence S., Crawford, Gregory E., Yan, Hai, He, Yiping
Veröffentlicht 2014

CRISPR–Cas9 epigenome editing enables high-throughput screening for functional regulatory elements in the human genome

von Klann, Tyler S., Black, Joshua B., Chellappan, Malathi, Safi, Alexias, Song, Lingyun, Hilton, Isaac B., Crawford, Gregory E., Reddy, Timothy E., Gersbach, Charles A.
Veröffentlicht in Nat Biotechnol (2017)

A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity

von Zhang, Bing, Day, Daniel S., Ho, Joshua W., Song, Lingyun, Cao, Jingjing, Christodoulou, Danos, Seidman, Jonathan G., Crawford, Gregory E., Park, Peter J., Pu, William T.
Veröffentlicht 2013