The C-terminal domain of DNA gyrase A adopts a DNA-bending β-pinwheel fold

Por Corbett, Kevin D., Shultzaberger, Ryan K., Berger, James M.
Publicado em 2004

Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay

Por Munchel, Sarah E., Shultzaberger, Ryan K., Takizawa, Naoki, Weis, Karsten
Publicado em 2011

Anatomy of Escherichia coli σ(70) promoters

Por Shultzaberger, Ryan K., Chen, Zehua, Lewis, Karen A., Schneider, Thomas D.
Publicado em 2007

The Fitness Landscapes of cis-Acting Binding Sites in Different Promoter and Environmental Contexts

Por Shultzaberger, Ryan K., Malashock, Daniel S., Kirsch, Jack F., Eisen, Michael B.
Publicado em 2010

Determining Physical Constraints in Transcriptional Initiation Complexes Using DNA Sequence Analysis

Por Shultzaberger, Ryan K., Chiang, Derek Y., Moses, Alan M., Eisen, Michael B.
Publicado em 2007

Probing the Informational and Regulatory Plasticity of a Transcription Factor DNA–Binding Domain

Por Shultzaberger, Ryan K., Maerkl, Sebastian J., Kirsch, Jack F., Eisen, Michael B.
Publicado em 2012

Single mutations in sasA enable a simpler ΔcikA gene network architecture with equivalent circadian properties

Por Shultzaberger, Ryan K., Boyd, Joseph S., Katsuki, Takeo, Golden, Susan S., Greenspan, Ralph J.
Publicado no Proc Natl Acad Sci U S A (2014)

Giving time purpose: The S. elongatus clock in a broader network context

Por Shultzaberger, Ryan K., Boyd, Joseph S., Diamond, Spencer, Greenspan, Ralph J., Golden, Susan S.
Publicado no Annu Rev Genet (2015)

High throughput and quantitative approaches for measuring circadian rhythms in cyanobacteria using bioluminescence

Por Shultzaberger, Ryan K., Paddock, Mark L., Katsuki, Takeo, Greenspan, Ralph J., Golden, Susan S.
Publicado no Methods Enzymol (2014)

Flexible promoter architecture requirements for coactivator recruitment

Por Chiang, Derek Y, Nix, David A, Shultzaberger, Ryan K, Gasch, Audrey P, Eisen, Michael B
Publicado em 2006

Redox crisis underlies conditional light–dark lethality in cyanobacterial mutants that lack the circadian regulator, RpaA

Por Diamond, Spencer, Rubin, Benjamin E., Shultzaberger, Ryan K., Chen, You, Barber, Chase D., Golden, Susan S.
Publicado no Proc Natl Acad Sci U S A (2017)

Agnostic detection of genomic alterations by holistic DNA structural interrogation

Por Shultzaberger, Ryan K., Abrams, Rachel E., Sullivan, Challise J., Schmitt, Anthony D., Thompson, Thomas W. J., Dresios, John
Publicado no PLoS One (2018)

Discovery of Fur binding site clusters in Escherichia coli by information theory models

Por Chen, Zehua, Lewis, Karen A., Shultzaberger, Ryan K., Lyakhov, Ilya G., Zheng, Ming, Doan, Bernard, Storz, Gisela, Schneider, Thomas D.
Publicado em 2007

Correlation between binding rate constants and individual information of E. coli Fis binding sites

Por Shultzaberger, Ryan K., Roberts, Lindsey R., Lyakhov, Ilya G., Sidorov, Igor A., Stephen, Andrew G., Fisher, Robert J., Schneider, Thomas D.
Publicado em 2007

The essential gene set of a photosynthetic organism

Por Rubin, Benjamin E., Wetmore, Kelly M., Price, Morgan N., Diamond, Spencer, Shultzaberger, Ryan K., Lowe, Laura C., Curtin, Genevieve, Arkin, Adam P., Deutschbauer, Adam, Golden, Susan S.
Publicado no Proc Natl Acad Sci U S A (2015)