Gene prioritization in Type 2 Diabetes using domain interactions and network analysis

Por Sharma, Amitabh, Chavali, Sreenivas, Tabassum, Rubina, Tandon, Nikhil, Bharadwaj, Dwaipayan
Publicado em 2010

Mining literature for a comprehensive pathway analysis: A case study for retrieval of homocysteine related genes for genetic and epigenetic studies

Por Sharma, Priyanka, Senthilkumar, RD, Brahmachari, Vani, Sundaramoorthy, Elayanambi, Mahajan, Anubha, Sharma, Amitabh, Sengupta, Shantanu
Publicado em 2006

Uncovering disease-disease relationships through the incomplete human interactome

Por Menche, Jörg, Sharma, Amitabh, Kitsak, Maksim, Ghiassian, Susan, Vidal, Marc, Loscalzo, Joseph, Barabási, Albert-László
Publicado no Science (2015)

Tissue Specificity of Human Disease Module

Por Kitsak, Maksim, Sharma, Amitabh, Menche, Jörg, Guney, Emre, Ghiassian, Susan Dina, Loscalzo, Joseph, Barabási, Albert-László
Publicado no Sci Rep (2016)

Network-based Analysis of Genome Wide Association Data Provides Novel Candidate Genes for Lipid and Lipoprotein Traits

Por Sharma, Amitabh, Gulbahce, Natali, Pevzner, Samuel J., Menche, Jörg, Ladenvall, Claes, Folkersen, Lasse, Eriksson, Per, Orho-Melander, Marju, Barabási, Albert-László
Publicado em 2013

Controllability analysis of the directed human protein interaction network identifies disease genes and drug targets

Por Vinayagam, Arunachalam, Gibson, Travis E., Lee, Ho-Joon, Yilmazel, Bahar, Roesel, Charles, Hu, Yanhui, Kwon, Young, Sharma, Amitabh, Liu, Yang-Yu, Perrimon, Norbert, Barabási, Albert-László
Publicado no Proc Natl Acad Sci U S A (2016)

A multilocus genetic risk score for coronary heart disease: case-control and prospective cohort analyses

Por Ripatti, Samuli, Tikkanen, Emmi, Orho-Melander, Marju, Havulinna, Aki S, Silander, Kaisa, Sharma, Amitabh, Guiducci, Candace, Perola, Markus, Jula, Antti, Sinisalo, Juha, Lokki, Marja-Liisa, Nieminen, Markku S, Melander, Olle, Salomaa, Veikko, Peltonen, Leena, Kathiresan, Sekar
Publicado em 2010

A diVIsive Shuffling Approach (VIStA) for gene expression analysis to identify subtypes in Chronic Obstructive Pulmonary Disease

Por Menche, Jörg, Sharma, Amitabh, Cho, Michael H, Mayer, Ruth J, Rennard, Stephen I, Celli, Bartolome, Miller, Bruce E, Locantore, Nick, Tal-Singer, Ruth, Ghosh, Soumitra, Larminie, Chris, Bradley, Glyn, Riley, John H, Agusti, Alvar, Silverman, Edwin K, Barabási, Albert-László
Publicado em 2014

Endophenotype Network Models: Common Core of Complex Diseases

Por Ghiassian, Susan Dina, Menche, Jörg, Chasman, Daniel I., Giulianini, Franco, Wang, Ruisheng, Ricchiuto, Piero, Aikawa, Masanori, Iwata, Hiroshi, Müller, Christian, Zeller, Tania, Sharma, Amitabh, Wild, Philipp, Lackner, Karl, Singh, Sasha, Ridker, Paul M., Blankenberg, Stefan, Barabási, Albert-László, Loscalzo, Joseph
Publicado no Sci Rep (2016)

PARP9 and PARP14 cross-regulate macrophage activation via STAT1 ADP-ribosylation

Por Iwata, Hiroshi, Goettsch, Claudia, Sharma, Amitabh, Ricchiuto, Piero, Goh, Wilson Wen Bin, Halu, Arda, Yamada, Iwao, Yoshida, Hideo, Hara, Takuya, Wei, Mei, Inoue, Noriyuki, Fukuda, Daiju, Mojcher, Alexander, Mattson, Peter C., Barabási, Albert-László, Boothby, Mark, Aikawa, Elena, Singh, Sasha A., Aikawa, Masanori
Publicado no Nat Commun (2016)

A disease module in the interactome explains disease heterogeneity, drug response and captures novel pathways and genes in asthma

Por Sharma, Amitabh, Menche, Jörg, Huang, C. Chris, Ort, Tatiana, Zhou, Xiaobo, Kitsak, Maksim, Sahni, Nidhi, Thibault, Derek, Voung, Linh, Guo, Feng, Ghiassian, Susan Dina, Gulbahce, Natali, Baribaud, Frédéric, Tocker, Joel, Dobrin, Radu, Barnathan, Elliot, Liu, Hao, Panettieri, Reynold A., Tantisira, Kelan G., Qiu, Weiliang, Raby, Benjamin A., Silverman, Edwin K., Vidal, Marc, Weiss, Scott T., Barabási, Albert-László
Publicado no Hum Mol Genet (2015)

Early pregnancy vitamin D status and risk of preeclampsia

Por Mirzakhani, Hooman, Litonjua, Augusto A., McElrath, Thomas F., O’Connor, George, Lee-Parritz, Aviva, Iverson, Ronald, Macones, George, Strunk, Robert C., Bacharier, Leonard B., Zeiger, Robert, Hollis, Bruce W., Handy, Diane E., Sharma, Amitabh, Laranjo, Nancy, Carey, Vincent, Qiu, Weilliang, Santolini, Marc, Liu, Shikang, Chhabra, Divya, Enquobahrie, Daniel A., Williams, Michelle A., Loscalzo, Joseph, Weiss, Scott T.
Publicado no J Clin Invest (2016)

Genome-Wide Association Study for Type 2 Diabetes in Indians Identifies a New Susceptibility Locus at 2q21

Por Tabassum, Rubina, Chauhan, Ganesh, Dwivedi, Om Prakash, Mahajan, Anubha, Jaiswal, Alok, Kaur, Ismeet, Bandesh, Khushdeep, Singh, Tejbir, Mathai, Benan John, Pandey, Yogesh, Chidambaram, Manickam, Sharma, Amitabh, Chavali, Sreenivas, Sengupta, Shantanu, Ramakrishnan, Lakshmi, Venkatesh, Pradeep, Aggarwal, Sanjay K., Ghosh, Saurabh, Prabhakaran, Dorairaj, Srinath, Reddy K., Saxena, Madhukar, Banerjee, Monisha, Mathur, Sandeep, Bhansali, Anil, Shah, Viral N., Madhu, Sri Venkata, Marwaha, Raman K., Basu, Analabha, Scaria, Vinod, McCarthy, Mark I., Venkatesan, Radha, Mohan, Viswanathan, Tandon, Nikhil, Bharadwaj, Dwaipayan
Publicado em 2013

Widespread Macromolecular Interaction Perturbations in Human Genetic Disorders

Por Sahni, Nidhi, Yi, Song, Taipale, Mikko, Fuxman Bass, Juan I., Coulombe-Huntington, Jasmin, Yang, Fan, Peng, Jian, Weile, Jochen, Karras, Georgios I., Wang, Yang, Kovács, István A., Kamburov, Atanas, Krykbaeva, Irina, Lam, Mandy H., Tucker, George, Khurana, Vikram, Sharma, Amitabh, Liu, Yang-Yu, Yachie, Nozomu, Zhong, Quan, Shen, Yun, Palagi, Alexandre, San-Miguel, Adriana, Fan, Changyu, Balcha, Dawit, Dricot, Amelie, Jordan, Daniel M., Walsh, Jennifer M., Shah, Akash A., Yang, Xinping, Stoyanova, Ani, Leighton, Alex, Calderwood, Michael A., Jacob, Yves, Cusick, Michael E., Salehi-Ashtiani, Kourosh, Whitesell, Luke J., Sunyaev, Shamil, Berger, Bonnie, Barabási, Albert-László, Charloteaux, Benoit, Hill, David E., Hao, Tong, Roth, Frederick P., Xia, Yu, Walhout, Albertha J.M., Lindquist, Susan, Vidal, Marc
Publicado no Cell (2015)

A proteome-scale map of the human interactome network

Por Rolland, Thomas, Taşan, Murat, Charloteaux, Benoit, Pevzner, Samuel J., Zhong, Quan, Sahni, Nidhi, Yi, Song, Lemmens, Irma, Fontanillo, Celia, Mosca, Roberto, Kamburov, Atanas, Ghiassian, Susan D., Yang, Xinping, Ghamsari, Lila, Balcha, Dawit, Begg, Bridget E., Braun, Pascal, Brehme, Marc, Broly, Martin P., Carvunis, Anne-Ruxandra, Convery-Zupan, Dan, Corominas, Roser, Coulombe-Huntington, Jasmin, Dann, Elizabeth, Dreze, Matija, Dricot, Amélie, Fan, Changyu, Franzosa, Eric, Gebreab, Fana, Gutierrez, Bryan J., Hardy, Madeleine F., Jin, Mike, Kang, Shuli, Kiros, Ruth, Lin, Guan Ning, Luck, Katja, MacWilliams, Andrew, Menche, Jörg, Murray, Ryan R., Palagi, Alexandre, Poulin, Matthew M., Rambout, Xavier, Rasla, John, Reichert, Patrick, Romero, Viviana, Ruyssinck, Elien, Sahalie, Julie M., Scholz, Annemarie, Shah, Akash A., Sharma, Amitabh, Shen, Yun, Spirohn, Kerstin, Tam, Stanley, Tejeda, Alexander O., Wanamaker, Shelly A., Twizere, Jean-Claude, Vega, Kerwin, Walsh, Jennifer, Cusick, Michael E., Xia, Yu, Barabási, Albert-László, Iakoucheva, Lilia M., Aloy, Patrick, De Las Rivas, Javier, Tavernier, Jan, Calderwood, Michael A., Hill, David E., Hao, Tong, Roth, Frederick P., Vidal, Marc
Publicado no Cell (2014)