Rtpca: an R package for differential thermal proximity coaggregation analysis

gan Kurzawa, Nils, Mateus, André, Savitski, Mikhail M
Cyhoeddwyd yn Bioinformatics (2020)

The rise of proteome‐wide biophysics

gan Mateus, Andre, Savitski, Mikhail M, Piazza, Ilaria
Cyhoeddwyd yn Mol Syst Biol (2021)

Thermal proteome profiling: unbiased assessment of protein state through heat-induced stability changes

gan Mateus, André, Määttä, Tomi A., Savitski, Mikhail M.
Cyhoeddwyd yn Proteome Sci (2017)

A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets

gan Savitski, Mikhail M., Wilhelm, Mathias, Hahne, Hannes, Kuster, Bernhard, Bantscheff, Marcus
Cyhoeddwyd yn Mol Cell Proteomics (2015)

Systematic Localization of Escherichia coli Membrane Proteins

gan Sueki, Anna, Stein, Frank, Savitski, Mikhail M., Selkrig, Joel, Typas, Athanasios
Cyhoeddwyd yn mSystems (2020)

Effect of Sec61 interaction with Mpd1 on endoplasmic reticulum-associated degradation

gan Pereira, Fabio, Rettel, Mandy, Stein, Frank, Savitski, Mikhail M., Collinson, Ian, Römisch, Karin
Cyhoeddwyd yn PLoS One (2019)

De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry

gan Frank, Ari M., Savitski, Mikhail M., Nielsen, Michael N., Zubarev, Roman A., Pevzner, Pavel A.
Cyhoeddwyd 2007

Confident Phosphorylation Site Localization Using the Mascot Delta Score

gan Savitski, Mikhail M., Lemeer, Simone, Boesche, Markus, Lang, Manja, Mathieson, Toby, Bantscheff, Marcus, Kuster, Bernhard
Cyhoeddwyd 2011

Aggregation and disaggregation features of the human proteome

gan Määttä, Tomi A, Rettel, Mandy, Sridharan, Sindhuja, Helm, Dominic, Kurzawa, Nils, Stein, Frank, Savitski, Mikhail M
Cyhoeddwyd yn Mol Syst Biol (2020)

Thermal proteome profiling in bacteria: probing protein state in vivo

gan Mateus, André, Bobonis, Jacob, Kurzawa, Nils, Stein, Frank, Helm, Dominic, Hevler, Johannes, Typas, Athanasios, Savitski, Mikhail M
Cyhoeddwyd yn Mol Syst Biol (2018)

Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP

gan Sridharan, Sindhuja, Kurzawa, Nils, Werner, Thilo, Günthner, Ina, Helm, Dominic, Huber, Wolfgang, Bantscheff, Marcus, Savitski, Mikhail M.
Cyhoeddwyd yn Nat Commun (2019)

Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins

gan Childs, Dorothee, Bach, Karsten, Franken, Holger, Anders, Simon, Kurzawa, Nils, Bantscheff, Marcus, Savitski, Mikhail M., Huber, Wolfgang
Cyhoeddwyd yn Mol Cell Proteomics (2019)

Thermal proteome profiling for interrogating protein interactions

gan Mateus, André, Kurzawa, Nils, Becher, Isabelle, Sridharan, Sindhuja, Helm, Dominic, Stein, Frank, Typas, Athanasios, Savitski, Mikhail M
Cyhoeddwyd yn Mol Syst Biol (2020)

A computational method for detection of ligand-binding proteins from dose range thermal proteome profiles

gan Kurzawa, Nils, Becher, Isabelle, Sridharan, Sindhuja, Franken, Holger, Mateus, André, Anders, Simon, Bantscheff, Marcus, Huber, Wolfgang, Savitski, Mikhail M.
Cyhoeddwyd yn Nat Commun (2020)

Structure of the mycobacterial ESX-5 type VII secretion system pore complex

gan Beckham, Katherine S. H., Ritter, Christina, Chojnowski, Grzegorz, Ziemianowicz, Daniel S., Mullapudi, Edukondalu, Rettel, Mandy, Savitski, Mikhail M., Mortensen, Simon A., Kosinski, Jan, Wilmanns, Matthias
Cyhoeddwyd yn Sci Adv (2021)

Neuropeptidomic analysis of the embryonic Japanese quail diencephalon

gan Scholz, Birger, Alm, Henrik, Mattsson, Anna, Nilsson, Anna, Kultima, Kim, Savitski, Mikhail M, Fälth, Maria, Sköld, Karl, Brunström, Björn, Andren, Per E, Dencker, Lennart
Cyhoeddwyd 2010

The functional proteome landscape of Escherichia coli

gan Mateus, André, Hevler, Johannes, Bobonis, Jacob, Kurzawa, Nils, Shah, Malay, Mitosch, Karin, Goemans, Camille V., Helm, Dominic, Stein, Frank, Typas, Athanasios, Savitski, Mikhail M.
Cyhoeddwyd yn Nature (2020)

Impact of Temperature Dependent Sampling Procedures in Proteomics and Peptidomics – A Characterization of the Liver and Pancreas Post Mortem Degradome

gan Scholz, Birger, Sköld, Karl, Kultima, Kim, Fernandez, Celine, Waldemarson, Sofia, Savitski, Mikhail M., Söderquist, Marcus, Borén, Mats, Stella, Robert, Andrén, Per, Zubarev, Roman, James, Peter
Cyhoeddwyd 2011

Mutational Analysis of Glycogen Synthase Kinase 3β Protein Kinase Together with Kinome-Wide Binding and Stability Studies Suggests Context-Dependent Recognition of Kinases by the C...

gan Jin, Jing, Tian, Ruijun, Pasculescu, Adrian, Dai, Anna Yue, Williton, Kelly, Taylor, Lorne, Savitski, Mikhail M., Bantscheff, Marcus, Woodgett, James R., Pawson, Tony, Colwill, Karen
Cyhoeddwyd yn Mol Cell Biol (2016)

Leaderless secreted peptide signaling molecule alters global gene expression and increases virulence of a human bacterial pathogen

gan Do, Hackwon, Makthal, Nishanth, VanderWal, Arica R., Rettel, Mandy, Savitski, Mikhail M., Peschek, Nikolai, Papenfort, Kai, Olsen, Randall J., Musser, James M., Kumaraswami, Muthiah
Cyhoeddwyd yn Proc Natl Acad Sci U S A (2017)