Thermal proteome profiling: unbiased assessment of protein state through heat-induced stability changes

Autor Mateus, André, Määttä, Tomi A., Savitski, Mikhail M.
Vydáno v Proteome Sci (2017)

A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets

Autor Savitski, Mikhail M., Wilhelm, Mathias, Hahne, Hannes, Kuster, Bernhard, Bantscheff, Marcus
Vydáno v Mol Cell Proteomics (2015)

Systematic Localization of Escherichia coli Membrane Proteins

Autor Sueki, Anna, Stein, Frank, Savitski, Mikhail M., Selkrig, Joel, Typas, Athanasios
Vydáno v mSystems (2020)

Effect of Sec61 interaction with Mpd1 on endoplasmic reticulum-associated degradation

Autor Pereira, Fabio, Rettel, Mandy, Stein, Frank, Savitski, Mikhail M., Collinson, Ian, Römisch, Karin
Vydáno v PLoS One (2019)

De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry

Autor Frank, Ari M., Savitski, Mikhail M., Nielsen, Michael N., Zubarev, Roman A., Pevzner, Pavel A.
Vydáno 2007

Confident Phosphorylation Site Localization Using the Mascot Delta Score

Autor Savitski, Mikhail M., Lemeer, Simone, Boesche, Markus, Lang, Manja, Mathieson, Toby, Bantscheff, Marcus, Kuster, Bernhard
Vydáno 2011

Aggregation and disaggregation features of the human proteome

Autor Määttä, Tomi A, Rettel, Mandy, Sridharan, Sindhuja, Helm, Dominic, Kurzawa, Nils, Stein, Frank, Savitski, Mikhail M
Vydáno v Mol Syst Biol (2020)

Thermal proteome profiling in bacteria: probing protein state in vivo

Autor Mateus, André, Bobonis, Jacob, Kurzawa, Nils, Stein, Frank, Helm, Dominic, Hevler, Johannes, Typas, Athanasios, Savitski, Mikhail M
Vydáno v Mol Syst Biol (2018)

Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP

Autor Sridharan, Sindhuja, Kurzawa, Nils, Werner, Thilo, Günthner, Ina, Helm, Dominic, Huber, Wolfgang, Bantscheff, Marcus, Savitski, Mikhail M.
Vydáno v Nat Commun (2019)

Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins

Autor Childs, Dorothee, Bach, Karsten, Franken, Holger, Anders, Simon, Kurzawa, Nils, Bantscheff, Marcus, Savitski, Mikhail M., Huber, Wolfgang
Vydáno v Mol Cell Proteomics (2019)

Thermal proteome profiling for interrogating protein interactions

Autor Mateus, André, Kurzawa, Nils, Becher, Isabelle, Sridharan, Sindhuja, Helm, Dominic, Stein, Frank, Typas, Athanasios, Savitski, Mikhail M
Vydáno v Mol Syst Biol (2020)

A computational method for detection of ligand-binding proteins from dose range thermal proteome profiles

Autor Kurzawa, Nils, Becher, Isabelle, Sridharan, Sindhuja, Franken, Holger, Mateus, André, Anders, Simon, Bantscheff, Marcus, Huber, Wolfgang, Savitski, Mikhail M.
Vydáno v Nat Commun (2020)

Neuropeptidomic analysis of the embryonic Japanese quail diencephalon

Autor Scholz, Birger, Alm, Henrik, Mattsson, Anna, Nilsson, Anna, Kultima, Kim, Savitski, Mikhail M, Fälth, Maria, Sköld, Karl, Brunström, Björn, Andren, Per E, Dencker, Lennart
Vydáno 2010

The functional proteome landscape of Escherichia coli

Autor Mateus, André, Hevler, Johannes, Bobonis, Jacob, Kurzawa, Nils, Shah, Malay, Mitosch, Karin, Goemans, Camille V., Helm, Dominic, Stein, Frank, Typas, Athanasios, Savitski, Mikhail M.
Vydáno v Nature (2020)

Impact of Temperature Dependent Sampling Procedures in Proteomics and Peptidomics – A Characterization of the Liver and Pancreas Post Mortem Degradome

Autor Scholz, Birger, Sköld, Karl, Kultima, Kim, Fernandez, Celine, Waldemarson, Sofia, Savitski, Mikhail M., Söderquist, Marcus, Borén, Mats, Stella, Robert, Andrén, Per, Zubarev, Roman, James, Peter
Vydáno 2011

Mutational Analysis of Glycogen Synthase Kinase 3β Protein Kinase Together with Kinome-Wide Binding and Stability Studies Suggests Context-Dependent Recognition of Kinases by the C...

Autor Jin, Jing, Tian, Ruijun, Pasculescu, Adrian, Dai, Anna Yue, Williton, Kelly, Taylor, Lorne, Savitski, Mikhail M., Bantscheff, Marcus, Woodgett, James R., Pawson, Tony, Colwill, Karen
Vydáno v Mol Cell Biol (2016)

Leaderless secreted peptide signaling molecule alters global gene expression and increases virulence of a human bacterial pathogen

Autor Do, Hackwon, Makthal, Nishanth, VanderWal, Arica R., Rettel, Mandy, Savitski, Mikhail M., Peschek, Nikolai, Papenfort, Kai, Olsen, Randall J., Musser, James M., Kumaraswami, Muthiah
Vydáno v Proc Natl Acad Sci U S A (2017)

A genetic analysis reveals novel histone residues required for transcriptional reprogramming upon stress

Autor Viéitez, Cristina, Martínez-Cebrián, Gerard, Solé, Carme, Böttcher, René, Potel, Clement M, Savitski, Mikhail M, Onnebo, Sara, Fabregat, Marc, Shilatifard, Ali, Posas, Francesc, de Nadal, Eulàlia
Vydáno v Nucleic Acids Res (2020)

Dissecting the sequence determinants for dephosphorylation by the catalytic subunits of phosphatases PP1 and PP2A

Autor Hoermann, Bernhard, Kokot, Thomas, Helm, Dominic, Heinzlmeir, Stephanie, Chojnacki, Jeremy E., Schubert, Thomas, Ludwig, Christina, Berteotti, Anna, Kurzawa, Nils, Kuster, Bernhard, Savitski, Mikhail M., Köhn, Maja
Vydáno v Nat Commun (2020)

A misprocessed form of Apolipoprotein A-I is specifically associated with recurrent Focal Segmental Glomerulosclerosis

Autor Jacobs-Cachá, Conxita, Puig-Gay, Natàlia, Helm, Dominic, Rettel, Mandy, Sellarès, Joana, Meseguer, Anna, Savitski, Mikhail M., Moreso, Francesc J., Soler, Maria José, Seron, Daniel, Lopez-Hellin, Joan
Vydáno v Sci Rep (2020)