g:Profiler—a web-based toolset for functional profiling of gene lists from large-scale experiments

Por Reimand, Jüri, Kull, Meelis, Peterson, Hedi, Hansen, Jaanus, Vilo, Jaak
Publicado em 2007

GraphWeb: mining heterogeneous biological networks for gene modules with functional significance

Por Reimand, Jüri, Tooming, Laur, Peterson, Hedi, Adler, Priit, Vilo, Jaak
Publicado em 2008

VisHiC—hierarchical functional enrichment analysis of microarray data

Por Krushevskaya, Darya, Peterson, Hedi, Reimand, Jüri, Kull, Meelis, Vilo, Jaak
Publicado em 2009

Mining for coexpression across hundreds of datasets using novel rank aggregation and visualization methods

Por Adler, Priit, Kolde, Raivo, Kull, Meelis, Tkachenko, Aleksandr, Peterson, Hedi, Reimand, Jüri, Vilo, Jaak
Publicado em 2009

A Data Integration Approach to Mapping OCT4 Gene Regulatory Networks Operative in Embryonic Stem Cells and Embryonal Carcinoma Cells

Por Jung, Marc, Peterson, Hedi, Chavez, Lukas, Kahlem, Pascal, Lehrach, Hans, Vilo, Jaak, Adjaye, James
Publicado em 2010

g:Profiler—a web server for functional interpretation of gene lists (2016 update)

Por Reimand, Jüri, Arak, Tambet, Adler, Priit, Kolberg, Liis, Reisberg, Sulev, Peterson, Hedi, Vilo, Jaak
Publicado no Nucleic Acids Res (2016)

Qualitative modeling identifies IL-11 as a novel regulator in maintaining self-renewal in human pluripotent stem cells

Por Peterson, Hedi, Abu Dawud, Raed, Garg, Abhishek, Wang, Ying, Vilo, Jaak, Xenarios, Ioannis, Adjaye, James
Publicado em 2013

Genome-wide promoter analysis of histone modifications in human monocyte-derived antigen presenting cells

Por Tserel, Liina, Kolde, Raivo, Rebane, Ana, Kisand, Kai, Org, Tõnis, Peterson, Hedi, Vilo, Jaak, Peterson, Pärt
Publicado em 2010

MicroRNA Expression Profiles of Human Blood Monocyte-derived Dendritic Cells and Macrophages Reveal miR-511 as Putative Positive Regulator of Toll-like Receptor 4

Por Tserel, Liina, Runnel, Toomas, Kisand, Kai, Pihlap, Maire, Bakhoff, Lairi, Kolde, Raivo, Peterson, Hedi, Vilo, Jaak, Peterson, Pärt, Rebane, Ana
Publicado em 2011

Comprehensive transcriptome analysis of mouse embryonic stem cell adipogenesis unravels new processes of adipocyte development

Por Billon, Nathalie, Kolde, Raivo, Reimand, Jüri, Monteiro, Miguel C, Kull, Meelis, Peterson, Hedi, Tretyakov, Konstantin, Adler, Priit, Wdziekonski, Brigitte, Vilo, Jaak, Dani, Christian
Publicado em 2010

Fingerprinting of neurotoxic compounds using a mouse embryonic stem cell dual luminescence reporter assay

Por Colaianna, Marilena, Ilmjärv, Sten, Peterson, Hedi, Kern, Ilse, Julien, Stephanie, Baquié, Mathurin, Pallocca, Giorgia, Bosgra, Sieto, Sachinidis, Agapios, Hengstler, Jan G., Leist, Marcel, Krause, Karl-Heinz
Publicado no Arch Toxicol (2016)

AIRE-Deficient Patients Harbor Unique High-Affinity Disease-Ameliorating Autoantibodies

Por Meyer, Steffen, Woodward, Martin, Hertel, Christina, Vlaicu, Philip, Haque, Yasmin, Kärner, Jaanika, Macagno, Annalisa, Onuoha, Shimobi C., Fishman, Dmytro, Peterson, Hedi, Metsküla, Kaja, Uibo, Raivo, Jäntti, Kirsi, Hokynar, Kati, Wolff, Anette S.B., Krohn, Kai, Ranki, Annamari, Peterson, Pärt, Kisand, Kai, Hayday, Adrian
Publicado no Cell (2016)

Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach

Por Krug, Anne K., Kolde, Raivo, Gaspar, John A., Rempel, Eugen, Balmer, Nina V., Meganathan, Kesavan, Vojnits, Kinga, Baquié, Mathurin, Waldmann, Tanja, Ensenat-Waser, Roberto, Jagtap, Smita, Evans, Richard M., Julien, Stephanie, Peterson, Hedi, Zagoura, Dimitra, Kadereit, Suzanne, Gerhard, Daniel, Sotiriadou, Isaia, Heke, Michael, Natarajan, Karthick, Henry, Margit, Winkler, Johannes, Marchan, Rosemarie, Stoppini, Luc, Bosgra, Sieto, Westerhout, Joost, Verwei, Miriam, Vilo, Jaak, Kortenkamp, Andreas, Hescheler, Jürgen, Hothorn, Ludwig, Bremer, Susanne, van Thriel, Christoph, Krause, Karl-Heinz, Hengstler, Jan G., Rahnenführer, Jörg, Leist, Marcel, Sachinidis, Agapios
Publicado em 2012

Tools and data services registry: a community effort to document bioinformatics resources

Por Ison, Jon, Rapacki, Kristoffer, Ménager, Hervé, Kalaš, Matúš, Rydza, Emil, Chmura, Piotr, Anthon, Christian, Beard, Niall, Berka, Karel, Bolser, Dan, Booth, Tim, Bretaudeau, Anthony, Brezovsky, Jan, Casadio, Rita, Cesareni, Gianni, Coppens, Frederik, Cornell, Michael, Cuccuru, Gianmauro, Davidsen, Kristian, Vedova, Gianluca Della, Dogan, Tunca, Doppelt-Azeroual, Olivia, Emery, Laura, Gasteiger, Elisabeth, Gatter, Thomas, Goldberg, Tatyana, Grosjean, Marie, Grüning, Björn, Helmer-Citterich, Manuela, Ienasescu, Hans, Ioannidis, Vassilios, Jespersen, Martin Closter, Jimenez, Rafael, Juty, Nick, Juvan, Peter, Koch, Maximilian, Laibe, Camille, Li, Jing-Woei, Licata, Luana, Mareuil, Fabien, Mičetić, Ivan, Friborg, Rune Møllegaard, Moretti, Sebastien, Morris, Chris, Möller, Steffen, Nenadic, Aleksandra, Peterson, Hedi, Profiti, Giuseppe, Rice, Peter, Romano, Paolo, Roncaglia, Paola, Saidi, Rabie, Schafferhans, Andrea, Schwämmle, Veit, Smith, Callum, Sperotto, Maria Maddalena, Stockinger, Heinz, Vařeková, Radka Svobodová, Tosatto, Silvio C.E., de la Torre, Victor, Uva, Paolo, Via, Allegra, Yachdav, Guy, Zambelli, Federico, Vriend, Gert, Rost, Burkhard, Parkinson, Helen, Løngreen, Peter, Brunak, Søren
Publicado no Nucleic Acids Res (2016)