iSPOT: a web tool to infer the interaction specificity of families of protein modules

מאת Brannetti, Barbara, Helmer-Citterich, Manuela
יצא לאור 2003

A structural study for the optimisation of functional motifs encoded in protein sequences

מאת Via, Allegra, Helmer-Citterich, Manuela
יצא לאור 2004

Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics

מאת Pesole, Graziano, Helmer-Citterich, Manuela
יצא לאור 2008

Bioinformatics in Italy: BITS2011, the Eighth Annual Meeting of the Italian Society of Bioinformatics

מאת Romano, Paolo, Helmer-Citterich, Manuela
יצא לאור 2012

Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics

מאת Casadio Rita, Helmer-Citterich Manuela, Pesole Graziano
יצא לאור 2007-03-01

Query3d: a new method for high-throughput analysis of functional residues in protein structures

מאת Ausiello, Gabriele, Via, Allegra, Helmer-Citterich, Manuela
יצא לאור 2005

Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics

מאת Casadio, Rita, Helmer-Citterich, Manuela, Pesole, Graziano
יצא לאור 2007

Modeling gene regulatory network motifs using statecharts

מאת Fioravanti, Fabio, Helmer-Citterich, Manuela, Nardelli, Enrico
יצא לאור 2012

Computational methods for analysis and inference of kinase/inhibitor relationships

מאת Ferrè, Fabrizio, Palmeri, Antonio, Helmer-Citterich, Manuela
יצא לאור 2014

Exploiting holistic approaches to model specificity in protein phosphorylation

מאת Palmeri, Antonio, Ferrè, Fabrizio, Helmer-Citterich, Manuela
יצא לאור 2014

Revealing protein–lncRNA interaction

מאת Ferrè, Fabrizio, Colantoni, Alessio, Helmer-Citterich, Manuela
הוצא לאור ב Brief Bioinform (2016)

Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations

מאת Gherardini, Pier Federico, Ausiello, Gabriele, Helmer-Citterich, Manuela
יצא לאור 2010

SURFACE: a database of protein surface regions for functional annotation

מאת Ferrè, Fabrizio, Ausiello, Gabriele, Zanzoni, Andreas, Helmer-Citterich, Manuela
יצא לאור 2004

Functional annotation by identification of local surface similarities: a novel tool for structural genomics

מאת Ferrè, Fabrizio, Ausiello, Gabriele, Zanzoni, Andreas, Helmer-Citterich, Manuela
יצא לאור 2005

A neural strategy for the inference of SH3 domain-peptide interaction specificity

מאת Ferraro, Enrico, Via, Allegra, Ausiello, Gabriele, Helmer-Citterich, Manuela
יצא לאור 2005

Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites

מאת Ausiello, Gabriele, Peluso, Daniele, Via, Allegra, Helmer-Citterich, Manuela
יצא לאור 2007

Nucleos: a web server for the identification of nucleotide-binding sites in protein structures

מאת Parca, Luca, Ferré, Fabrizio, Ausiello, Gabriele, Helmer-Citterich, Manuela
יצא לאור 2013

A novel approach to represent and compare RNA secondary structures

מאת Mattei, Eugenio, Ausiello, Gabriele, Ferrè, Fabrizio, Helmer-Citterich, Manuela
יצא לאור 2014

Web-Beagle: a web server for the alignment of RNA secondary structures

מאת Mattei, Eugenio, Pietrosanto, Marco, Ferrè, Fabrizio, Helmer-Citterich, Manuela
הוצא לאור ב Nucleic Acids Res (2015)

A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications

מאת Pietrosanto, Marco, Mattei, Eugenio, Helmer-Citterich, Manuela, Ferrè, Fabrizio
הוצא לאור ב Nucleic Acids Res (2016)