Web-Beagle: a web server for the alignment of RNA secondary structures

od Mattei, Eugenio, Pietrosanto, Marco, Ferrè, Fabrizio, Helmer-Citterich, Manuela
Izdano u Nucleic Acids Res (2015)

A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications

od Pietrosanto, Marco, Mattei, Eugenio, Helmer-Citterich, Manuela, Ferrè, Fabrizio
Izdano u Nucleic Acids Res (2016)

Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling

od Janson, Giacomo, Grottesi, Alessandro, Pietrosanto, Marco, Ausiello, Gabriele, Guarguaglini, Giulia, Paiardini, Alessandro
Izdano u PLoS Comput Biol (2019)

BEAM web server: a tool for structural RNA motif discovery

od Pietrosanto, Marco, Adinolfi, Marta, Casula, Riccardo, Ausiello, Gabriele, Ferrè, Fabrizio, Helmer-Citterich, Manuela
Izdano u Bioinformatics (2018)

Discovering sequence and structure landscapes in RNA interaction motifs

od Adinolfi, Marta, Pietrosanto, Marco, Parca, Luca, Ausiello, Gabriele, Ferrè, Fabrizio, Helmer-Citterich, Manuela
Izdano u Nucleic Acids Res (2019)

Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments

od Pietrosanto, Marco, Adinolfi, Marta, Guarracino, Andrea, Ferrè, Fabrizio, Ausiello, Gabriele, Vitale, Ilio, Helmer-Citterich, Manuela
Izdano u NAR Genom Bioinform (2021)

BRIO: a web server for RNA sequence and structure motif scan

od Guarracino, Andrea, Pepe, Gerardo, Ballesio, Francesco, Adinolfi, Marta, Pietrosanto, Marco, Sangiovanni, Elisa, Vitale, Ilio, Ausiello, Gabriele, Helmer-Citterich, Manuela
Izdano u Nucleic Acids Res (2021)

Over-Expression of UV-Damage DNA Repair Genes and Ribonucleic Acid Persistence Contribute to the Resilience of Dried Biofilms of the Desert Cyanobacetrium Chroococcidiopsis Exposed...

od Mosca, Claudia, Rothschild, Lynn J., Napoli, Alessandro, Ferré, Fabrizio, Pietrosanto, Marco, Fagliarone, Claudia, Baqué, Mickael, Rabbow, Elke, Rettberg, Petra, Billi, Daniela
Izdano u Front Microbiol (2019)

Modeling cancer drug response through drug-specific informative genes

od Parca, Luca, Pepe, Gerardo, Pietrosanto, Marco, Galvan, Giulio, Galli, Leonardo, Palmeri, Antonio, Sciandrone, Marco, Ferrè, Fabrizio, Ausiello, Gabriele, Helmer-Citterich, Manuela
Izdano u Sci Rep (2019)

WWP1 germline variants are associated with normocephalic autism spectrum disorder

od Novelli, Giuseppe, Novelli, Antonio, Borgiani, Paola, Cocciadiferro, Dario, Biancolella, Michela, Agolini, Emanuele, Pietrosanto, Marco, Casalone, Rosario, Helmer-Citterich, Manuela, Giardina, Emiliano, Jain, Suresh K., Wei, Wenyi, Eng, Charis, Pandolfi, Pier Paolo
Izdano u Cell Death Dis (2020)

A eutherian-specific microRNA controls the translation of Satb2 in a model of cortical differentiation

od Martins, Manuella, Galfrè, Silvia, Terrigno, Marco, Pandolfini, Luca, Appolloni, Irene, Dunville, Keagan, Marranci, Andrea, Rizzo, Milena, Mercatanti, Alberto, Poliseno, Laura, Morandin, Francesco, Pietrosanto, Marco, Helmer-Citterich, Manuela, Malatesta, Paolo, Vignali, Robert, Cremisi, Federico
Izdano u Stem Cell Reports (2021)