BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

Por Jespersen, Martin Closter, Peters, Bjoern, Nielsen, Morten, Marcatili, Paolo
Publicado no Nucleic Acids Res (2017)

Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes

Por Jespersen, Martin Closter, Mahajan, Swapnil, Peters, Bjoern, Nielsen, Morten, Marcatili, Paolo
Publicado no Front Immunol (2019)

LYRA, a webserver for lymphocyte receptor structural modeling

Por Klausen, Michael Schantz, Anderson, Mads Valdemar, Jespersen, Martin Closter, Nielsen, Morten, Marcatili, Paolo
Publicado no Nucleic Acids Res (2015)

Benchmark datasets of immune receptor-epitope structural complexes

Por Mahajan, Swapnil, Yan, Zhen, Jespersen, Martin Closter, Jensen, Kamilla Kjærgaard, Marcatili, Paolo, Nielsen, Morten, Sette, Alessandro, Peters, Bjoern
Publicado no BMC Bioinformatics (2019)

Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database

Por Mahajan, Swapnil, Vita, Randi, Shackelford, Deborah, Lane, Jerome, Schulten, Veronique, Zarebski, Laura, Jespersen, Martin Closter, Marcatili, Paolo, Nielsen, Morten, Sette, Alessandro, Peters, Bjoern
Publicado no Front Immunol (2018)

IEDB-AR: immune epitope database—analysis resource in 2019

Por Dhanda, Sandeep Kumar, Mahajan, Swapnil, Paul, Sinu, Yan, Zhen, Kim, Haeuk, Jespersen, Martin Closter, Jurtz, Vanessa, Andreatta, Massimo, Greenbaum, Jason A, Marcatili, Paolo, Sette, Alessandro, Nielsen, Morten, Peters, Bjoern
Publicado no Nucleic Acids Res (2019)

TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes

Por Jensen, Kamilla Kjærgaard, Rantos, Vasileios, Jappe, Emma Christine, Olsen, Tobias Hegelund, Jespersen, Martin Closter, Jurtz, Vanessa, Jessen, Leon Eyrich, Lanzarotti, Esteban, Mahajan, Swapnil, Peters, Bjoern, Nielsen, Morten, Marcatili, Paolo
Publicado no Sci Rep (2019)

Tools and data services registry: a community effort to document bioinformatics resources

Por Ison, Jon, Rapacki, Kristoffer, Ménager, Hervé, Kalaš, Matúš, Rydza, Emil, Chmura, Piotr, Anthon, Christian, Beard, Niall, Berka, Karel, Bolser, Dan, Booth, Tim, Bretaudeau, Anthony, Brezovsky, Jan, Casadio, Rita, Cesareni, Gianni, Coppens, Frederik, Cornell, Michael, Cuccuru, Gianmauro, Davidsen, Kristian, Vedova, Gianluca Della, Dogan, Tunca, Doppelt-Azeroual, Olivia, Emery, Laura, Gasteiger, Elisabeth, Gatter, Thomas, Goldberg, Tatyana, Grosjean, Marie, Grüning, Björn, Helmer-Citterich, Manuela, Ienasescu, Hans, Ioannidis, Vassilios, Jespersen, Martin Closter, Jimenez, Rafael, Juty, Nick, Juvan, Peter, Koch, Maximilian, Laibe, Camille, Li, Jing-Woei, Licata, Luana, Mareuil, Fabien, Mičetić, Ivan, Friborg, Rune Møllegaard, Moretti, Sebastien, Morris, Chris, Möller, Steffen, Nenadic, Aleksandra, Peterson, Hedi, Profiti, Giuseppe, Rice, Peter, Romano, Paolo, Roncaglia, Paola, Saidi, Rabie, Schafferhans, Andrea, Schwämmle, Veit, Smith, Callum, Sperotto, Maria Maddalena, Stockinger, Heinz, Vařeková, Radka Svobodová, Tosatto, Silvio C.E., de la Torre, Victor, Uva, Paolo, Via, Allegra, Yachdav, Guy, Zambelli, Federico, Vriend, Gert, Rost, Burkhard, Parkinson, Helen, Løngreen, Peter, Brunak, Søren
Publicado no Nucleic Acids Res (2016)