Space, time and microdiversity: towards a resolution revolution in microbiomics

Yazar: Paoli, Lucas, Sunagawa, Shinichi
Yayımlandı Environ Microbiol Rep (2020)

metaSNV: A tool for metagenomic strain level analysis

Yazar: Costea, Paul Igor, Munch, Robin, Coelho, Luis Pedro, Paoli, Lucas, Sunagawa, Shinichi, Bork, Peer
Yayımlandı PLoS One (2017)

Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes

Yazar: Dorrell, Richard G., Azuma, Tomonori, Nomura, Mami, Audren de Kerdrel, Guillemette, Paoli, Lucas, Yang, Shanshan, Bowler, Chris, Ishii, Ken-ichiro, Miyashita, Hideaki, Gile, Gillian H., Kamikawa, Ryoma
Yayımlandı Proc Natl Acad Sci U S A (2019)

Plastid Transcript Editing across Dinoflagellate Lineages Shows Lineage-Specific Application but Conserved Trends

Yazar: Klinger, Christen M, Paoli, Lucas, Newby, Robert J, Wang, Matthew Yu-Wei, Carroll, Hyrum D, Leblond, Jeffrey D, Howe, Christopher J, Dacks, Joel B, Bowler, Chris, Cahoon, Aubery Bruce, Dorrell, Richard G, Richardson, Elisabeth
Yayımlandı Genome Biol Evol (2018)

proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes

Yazar: Mende, Daniel R, Letunic, Ivica, Maistrenko, Oleksandr M, Schmidt, Thomas S B, Milanese, Alessio, Paoli, Lucas, Hernández-Plaza, Ana, Orakov, Askarbek N, Forslund, Sofia K, Sunagawa, Shinichi, Zeller, Georg, Huerta-Cepas, Jaime, Coelho, Luis Pedro, Bork, Peer
Yayımlandı Nucleic Acids Res (2020)

Microbial abundance, activity and population genomic profiling with mOTUs2

Yazar: Milanese, Alessio, Mende, Daniel R, Paoli, Lucas, Salazar, Guillem, Ruscheweyh, Hans-Joachim, Cuenca, Miguelangel, Hingamp, Pascal, Alves, Renato, Costea, Paul I, Coelho, Luis Pedro, Schmidt, Thomas S. B., Almeida, Alexandre, Mitchell, Alex L, Finn, Robert D., Huerta-Cepas, Jaime, Bork, Peer, Zeller, Georg, Sunagawa, Shinichi
Yayımlandı Nat Commun (2019)

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

Yazar: Acinas, Silvia G., Sánchez, Pablo, Salazar, Guillem, Cornejo-Castillo, Francisco M., Sebastián, Marta, Logares, Ramiro, Royo-Llonch, Marta, Paoli, Lucas, Sunagawa, Shinichi, Hingamp, Pascal, Ogata, Hiroyuki, Lima-Mendez, Gipsi, Roux, Simon, González, José M., Arrieta, Jesús M., Alam, Intikhab S., Kamau, Allan, Bowler, Chris, Raes, Jeroen, Pesant, Stéphane, Bork, Peer, Agustí, Susana, Gojobori, Takashi, Vaqué, Dolors, Sullivan, Matthew B., Pedrós-Alió, Carlos, Massana, Ramon, Duarte, Carlos M., Gasol, Josep M.
Yayımlandı Commun Biol (2021)

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Yazar: Salazar, Guillem, Paoli, Lucas, Alberti, Adriana, Huerta-Cepas, Jaime, Ruscheweyh, Hans-Joachim, Cuenca, Miguelangel, Field, Christopher M., Coelho, Luis Pedro, Cruaud, Corinne, Engelen, Stefan, Gregory, Ann C., Labadie, Karine, Marec, Claudie, Pelletier, Eric, Royo-Llonch, Marta, Roux, Simon, Sánchez, Pablo, Uehara, Hideya, Zayed, Ahmed A., Zeller, Georg, Carmichael, Margaux, Dimier, Céline, Ferland, Joannie, Kandels, Stefanie, Picheral, Marc, Pisarev, Sergey, Poulain, Julie, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Bowler, Chris, de Vargas, Colomban, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Karp-Boss, Lee, Karsenti, Eric, Ogata, Hiroyuki, Pesant, Stephane, Speich, Sabrina, Sullivan, Matthew B., Wincker, Patrick, Sunagawa, Shinichi
Yayımlandı Cell (2019)