Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks

द्वारा Ouyang, Zhengyu, Song, Mingzhou (Joe)
प्रकाशित 2009

Statistical Analysis of Discrete Dynamical System Models for Biological Networks

द्वारा Ouyang, Zhengyu, Song, Mingzhou (Joe)
में प्रकाशित Proc Int Joint Conf Bioinforma Syst Biol Intell Comput (2009)

Discrete Dynamical System Modeling for Gene Regulatory Networks of HMF Tolerance for Ethanologenic Yeast

द्वारा Song, Mingzhou (Joe), Ouyang, Zhengyu, Liu, Z. Lewis
प्रकाशित 2009

MAGGIE: leveraging genetic variation to identify DNA sequence motifs mediating transcription factor binding and function

द्वारा Shen, Zeyang, Hoeksema, Marten A, Ouyang, Zhengyu, Benner, Christopher, Glass, Christopher K
में प्रकाशित Bioinformatics (2020)

Conserved and differential gene interactions in dynamical biological systems

द्वारा Ouyang, Zhengyu, Song, Mingzhou, Güth, Robert, Ha, Thomas J., Larouche, Matt, Goldowitz, Dan
प्रकाशित 2011

Discerning mechanistically rewired biological pathways by cumulative interaction heterogeneity statistics

द्वारा Cotton, Travis B., Nguyen, Hien H., Said, Joseph I., Ouyang, Zhengyu, Zhang, Jinfa, Song, Mingzhou
में प्रकाशित Sci Rep (2015)

Metabolic pathway activation distinguish transcriptional signatures of CD8(+) T cells from HIV-1 elite controllers

द्वारा CHOWDHURY, Fatema Z., OUYANG, Zhengyu, BUZON, Maria, WALKER, Bruce D., LICHTERFELD, Mathias, YU, Xu G.
में प्रकाशित AIDS (2018)

Prolonged Antiretroviral Therapy Preserves HIV-1-Specific CD8 T Cells with Stem Cell-Like Properties

द्वारा Vigano, Selena, Negron, Jordi, Ouyang, Zhengyu, Rosenberg, Eric S., Walker, Bruce D., Lichterfeld, Mathias, Yu, Xu G.
में प्रकाशित J Virol (2015)

Th1/17 Polarization of CD4 T Cells Supports HIV-1 Persistence during Antiretroviral Therapy

द्वारा Sun, Hong, Kim, Dhohyung, Li, Xiaodong, Kiselinova, Maja, Ouyang, Zhengyu, Vandekerckhove, Linos, Shang, Hong, Rosenberg, Eric S., Yu, Xu G., Lichterfeld, Mathias
में प्रकाशित J Virol (2015)

Potent Cell-Intrinsic Immune Responses in Dendritic Cells Facilitate HIV-1-Specific T Cell Immunity in HIV-1 Elite Controllers

द्वारा Martin-Gayo, Enrique, Buzon, Maria Jose, Ouyang, Zhengyu, Hickman, Taylor, Cronin, Jacqueline, Pimenova, Dina, Walker, Bruce D., Lichterfeld, Mathias, Yu, Xu G.
में प्रकाशित PLoS Pathog (2015)

Transcriptomic and epigenetic mechanisms underlying myeloid diversity in the lung

द्वारा Sajti, Eniko, Link, Verena M., Ouyang, Zhengyu, Spann, Nathanael J., Westin, Emma, Romanoski, Casey E., Fonseca, Gregory J., Prince, Lawrence S., Glass, Christopher K.
में प्रकाशित Nat Immunol (2020)

Susceptibility to CD8 T cell-mediated killing influences the reservoir of latently HIV-1 infected CD4 T cells

द्वारा Buzon, Maria J., Yang, Yue, Ouyang, Zhengyu, Sun, Hong, Seiss, Katherine, Rogich, Jerome, Le Gall, Sylvie, Pereyra, Florencia, Rosenberg, Eric S., Yu, Xu G., Lichterfeld, Mathias
प्रकाशित 2014

Transcriptional Changes in CD8(+) T Cells During Antiretroviral Therapy Intensified With Raltegravir

द्वारा Ouyang, Zhengyu, Buzon, Maria J., Zheng, Lu, Sun, Hong, Yu, Xu G., Bosch, Ronald J., Mellors, John W., Eron, Joseph J., Gandhi, Rajesh T., Lichterfeld, Mathias
में प्रकाशित Open Forum Infect Dis (2015)

Plasma Levels of Complement Factor I and C4b Peptides Are Associated with HIV Suppression

द्वारा Wu, Boyue, Ouyang, Zhengyu, Lyon, Christopher J., Zhang, Wei, Clift, Tori, Bone, Christopher R., Li, Boan, Zhao, Zhen, Kimata, Jason T., Yu, Xu G., Hu, Ye
में प्रकाशित ACS Infect Dis (2017)

Immunological Fingerprints of Controllers Developing Neutralizing HIV-1 Antibodies

द्वारा Martin-Gayo, Enrique, Gao, Ce, Chen, Hsiao Rong, Ouyang, Zhengyu, Kim, Dhohyung, Kolb, Kellie E., Shalek, Alex K., Walker, Bruce D., Lichterfeld, Mathias, Yu, Xu G.
में प्रकाशित Cell Rep (2020)

Immune-profiling of ZIKV-infected patients identifies a distinct function of plasmacytoid dendritic cells for immune cross-regulation

द्वारा Sun, Xiaoming, Hua, Stephane, Gao, Ce, Blackmer, Jane E., Ouyang, Zhengyu, Ard, Kevin, Ciaranello, Andrea, Yawetz, Sigal, Sax, Paul E., Rosenberg, Eric S., Lichterfeld, Mathias, Yu, Xu G.
में प्रकाशित Nat Commun (2020)

Transcriptional changes during naturally-acquired Zika Virus infection render dendritic cells highly conducive to viral replication

द्वारा Sun, Xiaoming, Hua, Stephane, Chen, Hsiao-Rong, Ouyang, Zhengyu, Einkauf, Kevin, Tse, Samantha, Ard, Kevin, Ciaranello, Andrea, Yawetz, Sigal, Sax, Paul, Rosenberg, Eric S., Lichterfeld, Mathias, Yu, Xu G.
में प्रकाशित Cell Rep (2017)

Innate Immune Activity Correlates with CD4 T Cell-Associated HIV-1 DNA Decline during Latency-Reversing Treatment with Panobinostat

द्वारा Olesen, Rikke, Vigano, Selena, Rasmussen, Thomas A., Søgaard, Ole S., Ouyang, Zhengyu, Buzon, Maria, Bashirova, Arman, Carrington, Mary, Palmer, Sarah, Brinkmann, Christel R., Yu, Xu G., Østergaard, Lars, Tolstrup, Martin, Lichterfeld, Mathias
में प्रकाशित J Virol (2015)

A Reproducibility-Based Computational Framework Identifies an Inducible, Enhanced Antiviral State in Dendritic Cells from HIV-1 Elite Controllers

द्वारा Martin-Gayo, Enrique, Cole, Michael B., Kolb, Kellie E., Ouyang, Zhengyu, Cronin, Jacqueline, Kazer, Samuel W., Ordovas-Montanes, Jose, Lichterfeld, Mathias, Walker, Bruce D., Yosef, Nir, Shalek, Alex K., Yu, Xu G.
में प्रकाशित Genome Biol (2018)

Treatment of HIV-Infected Individuals with the Histone Deacetylase Inhibitor Panobinostat Results in Increased Numbers of Regulatory T Cells and Limits Ex Vivo Lipopolysaccharide-I...

द्वारा Brinkmann, Christel Rothe, Højen, Jesper Falkesgaard, Rasmussen, Thomas Aagaard, Kjær, Anne Sofie, Olesen, Rikke, Denton, Paul W., Østergaard, Lars, Ouyang, Zhengyu, Lichterfeld, Mathias, Yu, Xu, Søgaard, Ole Schmeltz, Dinarello, Charles, Tolstrup, Martin
में प्रकाशित mSphere (2018)