Integrated Cellular and Gene Interaction Modeling of Pattern Formation

door Nguyen, Hien, Song, Mingzhou
Gepubliceerd in 2011

Ckmeans.1d.dp: Optimal k-means Clustering in One Dimension by Dynamic Programming

door Wang, Haizhou, Song, Mingzhou
Gepubliceerd in R J (2011)

A fast exact functional test for directional association and cancer biology applications

door Zhong, Hua, Song, Mingzhou
Gepubliceerd in IEEE/ACM Trans Comput Biol Bioinform (2018)

Directional association test reveals high-quality putative cancer driver biomarkers including noncoding RNAs

door Zhong, Hua, Song, Mingzhou
Gepubliceerd in BMC Med Genomics (2019)

Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers

door Song, Mingzhou, Zhong, Hua
Gepubliceerd in Bioinformatics (2020)

Optimal In Silico Target Gene Deletion through Nonlinear Programming for Genetic Engineering

door Hong, Chung-Chien, Song, Mingzhou
Gepubliceerd in 2010

Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks

door Ouyang, Zhengyu, Song, Mingzhou (Joe)
Gepubliceerd in 2009

Statistical Analysis of Discrete Dynamical System Models for Biological Networks

door Ouyang, Zhengyu, Song, Mingzhou (Joe)
Gepubliceerd in Proc Int Joint Conf Bioinforma Syst Biol Intell Comput (2009)

Evolutionarily engineered ethanologenic yeast detoxifies lignocellulosic biomass conversion inhibitors by reprogrammed pathways

door Liu, Z. Lewis, Ma, Menggen, Song, Mingzhou
Gepubliceerd in 2009

ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion

door Zhang, Yang, Liu, Z. Lewis, Song, Mingzhou
Gepubliceerd in Nucleic Acids Res (2015)

Discrete Dynamical System Modeling for Gene Regulatory Networks of HMF Tolerance for Ethanologenic Yeast

door Song, Mingzhou (Joe), Ouyang, Zhengyu, Liu, Z. Lewis
Gepubliceerd in 2009

Transcriptome responses in alfalfa associated with tolerance to intensive animal grazing

door Wang, Junjie, Zhao, Yan, Ray, Ian, Song, Mingzhou
Gepubliceerd in Sci Rep (2016)

A comprehensive meta QTL analysis for fiber quality, yield, yield related and morphological traits, drought tolerance, and disease resistance in tetraploid cotton

door Said, Joseph I, Lin, Zhongxu, Zhang, Xianlong, Song, Mingzhou, Zhang, Jinfa
Gepubliceerd in 2013

Nonmonotonic Pathway Gene Expression Analysis Reveals Oncogenic Role of p27/Kip1 at Intermediate Dose

door Nguyen, Hien H, Tilton, Susan C, Kemp, Christopher J, Song, Mingzhou
Gepubliceerd in Cancer Inform (2017)

Hunting complex differential gene interaction patterns across molecular contexts

door Song, Mingzhou, Zhang, Yang, Katzaroff, Alexia J., Edgar, Bruce A., Buttitta, Laura
Gepubliceerd in 2014

Constrained inference of protein interaction networks for invadopodium formation in cancer

door Wang, Haizhou, Leung, Ming, Wandinger‐Ness, Angela, Hudson, Laurie G., Song, Mingzhou
Gepubliceerd in IET Syst Biol (2016)

Conserved and differential gene interactions in dynamical biological systems

door Ouyang, Zhengyu, Song, Mingzhou, Güth, Robert, Ha, Thomas J., Larouche, Matt, Goldowitz, Dan
Gepubliceerd in 2011

Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Development

door (Joe) Song, Mingzhou, Hong, Chung-Chien, Zhang, Yang, Buttitta, Laura, Edgar, Bruce A.
Gepubliceerd in 2009

Genetic analysis of Verticillium wilt resistance in a backcross inbred line population and a meta-analysis of quantitative trait loci for disease resistance in cotton

door Zhang, Jinfa, Yu, Jiwen, Pei, Wenfeng, Li, Xingli, Said, Joseph, Song, Mingzhou, Sanogo, Soum
Gepubliceerd in BMC Genomics (2015)

Effect of Rainfall-Induced Soil Geochemistry Dynamics on Grassland Soil Microbial Communities

door Cruz-Martínez, Karelyn, Rosling, Anna, Zhang, Yang, Song, Mingzhou, Andersen, Gary L., Banfield, Jillian F.
Gepubliceerd in 2012