AdmixKJump: identifying population structure in recently diverged groups

Por O’Connor, Timothy D
Publicado no Source Code Biol Med (2015)

Genotype–phenotype associations: substitution models to detect evolutionary associations between phenotypic variables and genotypic evolutionary rate

Por O'Connor, Timothy D., Mundy, Nicholas I.
Publicado em 2009

Evolutionary Modeling of Genotype-Phenotype Associations, and Application to Primate Coding and Non-coding mtDNA Rate Variation

Por O’Connor, Timothy D., Mundy, Nicholas I.
Publicado em 2013

Accurate and equitable medical genomic analysis requires an understanding of demography and its influence on sample size and ratio

Por Kessler, Michael D., O’Connor, Timothy D.
Publicado no Genome Biol (2017)

The promise and limitations of population exomics for human evolution studies

Por Tennessen, Jacob A, O'Connor, Timothy D, Bamshad, Michael J, Akey, Joshua M
Publicado em 2011

Fine-Scale Patterns of Population Stratification Confound Rare Variant Association Tests

Por O’Connor, Timothy D., Kiezun, Adam, Bamshad, Michael, Rich, Stephen S., Smith, Joshua D., Turner, Emily, Leal, Suzanne M., Akey, Joshua M.
Publicado em 2013

Rare Variation Facilitates Inferences of Fine-Scale Population Structure in Humans

Por O’Connor, Timothy D., Fu, Wenqing, Mychaleckyj, Josyf C., Logsdon, Benjamin, Auer, Paul, Carlson, Christopher S., Leal, Suzanne M., Smith, Joshua D., Rieder, Mark J., Bamshad, Michael J., Nickerson, Deborah A., Akey, Joshua M.
Publicado no Mol Biol Evol (2015)

Analysis of 6,515 exomes reveals a recent origin of most human protein-coding variants

Por Fu, Wenqing, O'Connor, Timothy D., Jun, Goo, Kang, Hyun Min, Abecasis, Goncalo, Leal, Suzanne M., Gabriel, Stacey, Altshuler, David, Shendure, Jay, Nickerson, Deborah A., Bamshad, Michael J., GO, Broad, GO, Seattle, Akey, Joshua M.
Publicado em 2012

Challenges and disparities in the application of personalized genomic medicine to populations with African ancestry

Por Kessler, Michael D., Yerges-Armstrong, Laura, Taub, Margaret A., Shetty, Amol C., Maloney, Kristin, Jeng, Linda Jo Bone, Ruczinski, Ingo, Levin, Albert M., Williams, L. Keoki, Beaty, Terri H., Mathias, Rasika A., Barnes, Kathleen C., O'Connor, Timothy D.
Publicado no Nat Commun (2016)

An integrated genomic and transcriptomic survey of mucormycosis-causing fungi

Por Chibucos, Marcus C., Soliman, Sameh, Gebremariam, Teclegiorgis, Lee, Hongkyu, Daugherty, Sean, Orvis, Joshua, Shetty, Amol C., Crabtree, Jonathan, Hazen, Tracy H., Etienne, Kizee A., Kumari, Priti, O'Connor, Timothy D., Rasko, David A., Filler, Scott G., Fraser, Claire M., Lockhart, Shawn R., Skory, Christopher D., Ibrahim, Ashraf S., Bruno, Vincent M.
Publicado no Nat Commun (2016)

Identifying tagging SNPs for African specific genetic variation from the African Diaspora Genome

Por Johnston, Henry Richard, Hu, Yi-Juan, Gao, Jingjing, O’Connor, Timothy D., Abecasis, Gonçalo R., Wojcik, Genevieve L, Gignoux, Christopher R., Gourraud, Pierre-Antoine, Lizee, Antoine, Hansen, Mark, Genuario, Rob, Bullis, Dave, Lawley, Cindy, Kenny, Eimear E., Bustamante, Carlos, Beaty, Terri H., Mathias, Rasika A., Barnes, Kathleen C., Qin, Zhaohui S.
Publicado no Sci Rep (2017)

Evolution and Functional Impact of Rare Coding Variation from Deep Sequencing of Human Exomes

Por Tennessen, Jacob A., Bigham, Abigail W., O'Connor, Timothy D., Fu, Wenqing, Kenny, Eimear E., Gravel, Simon, McGee, Sean, Do, Ron, Liu, Xiaoming, Jun, Goo, Kang, Hyun Min, Jordan, Daniel, Leal, Suzanne M., Gabriel, Stacey, Rieder, Mark J., Abecasis, Goncalo, Altshuler, David, Nickerson, Deborah A., Boerwinkle, Eric, Sunyaev, Shamil, Bustamante, Carlos D., Bamshad, Michael J., Akey, Joshua M.
Publicado em 2012

A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome

Por Mathias, Rasika Ann, Taub, Margaret A., Gignoux, Christopher R., Fu, Wenqing, Musharoff, Shaila, O'Connor, Timothy D., Vergara, Candelaria, Torgerson, Dara G., Pino-Yanes, Maria, Shringarpure, Suyash S., Huang, Lili, Rafaels, Nicholas, Boorgula, Meher Preethi, Johnston, Henry Richard, Ortega, Victor E., Levin, Albert M., Song, Wei, Torres, Raul, Padhukasahasram, Badri, Eng, Celeste, Mejia-Mejia, Delmy-Aracely, Ferguson, Trevor, Qin, Zhaohui S., Scott, Alan F., Yazdanbakhsh, Maria, Wilson, James G., Marrugo, Javier, Lange, Leslie A., Kumar, Rajesh, Avila, Pedro C., Williams, L. Keoki, Watson, Harold, Ware, Lorraine B., Olopade, Christopher, Olopade, Olufunmilayo, Oliveira, Ricardo, Ober, Carole, Nicolae, Dan L., Meyers, Deborah, Mayorga, Alvaro, Knight-Madden, Jennifer, Hartert, Tina, Hansel, Nadia N., Foreman, Marilyn G., Ford, Jean G., Faruque, Mezbah U., Dunston, Georgia M., Caraballo, Luis, Burchard, Esteban G., Bleecker, Eugene, Araujo, Maria Ilma, Herrera-Paz, Edwin Francisco, Gietzen, Kimberly, Grus, Wendy E., Bamshad, Michael, Bustamante, Carlos D., Kenny, Eimear E., Hernandez, Ryan D., Beaty, Terri H., Ruczinski, Ingo, Akey, Joshua, Barnes, Kathleen C.
Publicado no Nat Commun (2016)

Insights into hominid evolution from the gorilla genome sequence

Por Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Greg E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Publicado em 2012

Great ape genetic diversity and population history

Por Prado-Martinez, Javier, Sudmant, Peter H., Kidd, Jeffrey M., Li, Heng, Kelley, Joanna L., Lorente-Galdos, Belen, Veeramah, Krishna R., Woerner, August E., O’Connor, Timothy D., Santpere, Gabriel, Cagan, Alexander, Theunert, Christoph, Casals, Ferran, Laayouni, Hafid, Munch, Kasper, Hobolth, Asger, Halager, Anders E., Malig, Maika, Hernandez-Rodriguez, Jessica, Hernando-Herraez, Irene, Prüfer, Kay, Pybus, Marc, Johnstone, Laurel, Lachmann, Michael, Alkan, Can, Twigg, Dorina, Petit, Natalia, Baker, Carl, Hormozdiari, Fereydoun, Fernandez-Callejo, Marcos, Dabad, Marc, Wilson, Michael L., Stevison, Laurie, Camprubí, Cristina, Carvalho, Tiago, Ruiz-Herrera, Aurora, Vives, Laura, Mele, Marta, Abello, Teresa, Kondova, Ivanela, Bontrop, Ronald E., Pusey, Anne, Lankester, Felix, Kiyang, John A., Bergl, Richard A., Lonsdorf, Elizabeth, Myers, Simon, Ventura, Mario, Gagneux, Pascal, Comas, David, Siegismund, Hans, Blanc, Julie, Agueda-Calpena, Lidia, Gut, Marta, Fulton, Lucinda, Tishkoff, Sarah A., Mullikin, James C., Wilson, Richard K., Gut, Ivo G., Gonder, Mary Katherine, Ryder, Oliver A., Hahn, Beatrice H., Navarro, Arcadi, Akey, Joshua M., Bertranpetit, Jaume, Reich, David, Mailund, Thomas, Schierup, Mikkel H., Hvilsom, Christina, Andrés, Aida M., Wall, Jeffrey D., Bustamante, Carlos D., Hammer, Michael F., Eichler, Evan E., Marques-Bonet, Tomas
Publicado em 2013