Sequence determinants of histone-DNA binding preferences: Comment on “Cracking the chromatin code: precise rule of nucleosome positioning” by Edward N. Trifonov

Por Morozov, Alexandre V.
Publicado em 2011

Single Temperature for Monte Carlo Optimization on Complex Landscapes

Por Tolkunov, Denis, Morozov, Alexandre V.
Publicado em 2012

Protein folding and binding can emerge as evolutionary spandrels through structural coupling

Por Manhart, Michael, Morozov, Alexandre V.
Publicado no Proc Natl Acad Sci U S A (2015)

A Biophysical Approach to Predicting Protein–DNA Binding Energetics

Por Locke, George, Morozov, Alexandre V.
Publicado no Genetics (2015)

Connecting protein structure with predictions of regulatory sites

Por Morozov, Alexandre V., Siggia, Eric D.
Publicado em 2007

Statistical Mechanics of Nucleosomes Constrained by Higher-Order Chromatin Structure

Por Chereji, Răzvan V., Morozov, Alexandre V.
Publicado em 2011

Ubiquitous nucleosome crowding in the yeast genome

Por Chereji, Răzvan V., Morozov, Alexandre V.
Publicado em 2014

Functional roles of nucleosome stability and dynamics

Por Chereji, Răzvan V., Morozov, Alexandre V.
Publicado no Brief Funct Genomics (2015)

A Universal Scaling Law Determines Time Reversibility and Steady State of Substitutions under Selection

Por Manhart, Michael, Haldane, Allan, Morozov, Alexandre V.
Publicado em 2012

Biophysical Fitness Landscapes for Transcription Factor Binding Sites

Por Haldane, Allan, Manhart, Michael, Morozov, Alexandre V.
Publicado em 2014

Path statistics, memory, and coarse-graining of continuous-time random walks on networks

Por Manhart, Michael, Kion-Crosby, Willow, Morozov, Alexandre V.
Publicado no J Chem Phys (2015)

Generalization of the Ewens sampling formula to arbitrary fitness landscapes

Por Khromov, Pavel, Malliaris, Constantin D., Morozov, Alexandre V.
Publicado no PLoS One (2018)

Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations

Por Morozov, Alexandre V., Kortemme, Tanja, Tsemekhman, Kiril, Baker, David
Publicado em 2004

Chromatin-dependent Transcription Factor Accessibility Rather than Nucleosome Remodeling Predominates during Global Transcriptional Restructuring in Saccharomyces cerevisiae

Por Zawadzki, Karl A., Morozov, Alexandre V., Broach, James R.
Publicado em 2009

Pairwise and higher-order correlations among drug-resistance mutations in HIV-1 subtype B protease

Por Haq, Omar, Levy, Ronald M, Morozov, Alexandre V, Andrec, Michael
Publicado em 2009

Statistical mechanics of nucleosome ordering by chromatin-structure-induced two-body interactions

Por Chereji, Răzvan V., Tolkunov, Denis, Locke, George, Morozov, Alexandre V.
Publicado em 2011

Correlated Electrostatic Mutations Provide a Reservoir of Stability in HIV Protease

Por Haq, Omar, Andrec, Michael, Morozov, Alexandre V., Levy, Ronald M.
Publicado em 2012

Global remodeling of nucleosome positions in C. elegans

Por Locke, George, Haberman, Devorah, Johnson, Steven M, Morozov, Alexandre V
Publicado em 2013

Protein–DNA binding specificity predictions with structural models

Por Morozov, Alexandre V., Havranek, James J., Baker, David, Siggia, Eric D.
Publicado em 2005

High-throughput sequencing reveals a simple model of nucleosome energetics

Por Locke, George, Tolkunov, Denis, Moqtaderi, Zarmik, Struhl, Kevin, Morozov, Alexandre V.
Publicado em 2010