PyQuant: A Versatile Framework for Analysis of Quantitative Mass Spectrometry Data

par Mitchell, Christopher J., Kim, Min-Sik, Na, Chan Hyun, Pandey, Akhilesh
Publié dans Mol Cell Proteomics (2016)

Unbiased identification of substrates of protein tyrosine phosphatase ptp‐3 in C. elegans

par Mitchell, Christopher J., Kim, Min-Sik, Zhong, Jun, Nirujogi, Raja Sekhar, Bose, Anjun K., Pandey, Akhilesh
Publié dans Mol Oncol (2016)

Prediction of Gene Activity in Early B Cell Development Based on an Integrative Multi-Omics Analysis

par Heydarian, Mohammad, Luperchio, Teresa Romeo, Cutler, Jevon, Mitchell, Christopher J., Kim, Min-Sik, Pandey, Akhilesh, Sollner-Webb, Barbara, Reddy, Karen
Publié dans J Proteomics Bioinform (2014)

miRge - A Multiplexed Method of Processing Small RNA-Seq Data to Determine MicroRNA Entropy

par Baras, Alexander S., Mitchell, Christopher J., Myers, Jason R., Gupta, Simone, Weng, Lien-Chun, Ashton, John M., Cornish, Toby C., Pandey, Akhilesh, Halushka, Marc K.
Publié dans PLoS One (2015)

Improved glucose homeostasis and enhanced insulin signalling in Grb14-deficient mice

par Cooney, Gregory J, Lyons, Ruth J, Crew, A Jayne, Jensen, Thomas E, Molero, Juan Carlos, Mitchell, Christopher J, Biden, Trevor J, Ormandy, Christopher J, James, David E, Daly, Roger J
Publié 2004

Glucose Homeostasis in Mice Is Transglutaminase 2 Independent

par Iismaa, Siiri E., Aplin, Mark, Holman, Sara, Yiu, Ting W., Jackson, Kristy, Burchfield, James G., Mitchell, Christopher J., O’Reilly, Liam, Davenport, Aimee, Cantley, James, Schmitz-Peiffer, Carsten, Biden, Trevor J., Cooney, Gregory J., Graham, Robert M.
Publié 2013

TSLP Signaling Network Revealed by SILAC-Based Phosphoproteomics

par Zhong, Jun, Kim, Min-Sik, Chaerkady, Raghothama, Wu, Xinyan, Huang, Tai-Chung, Getnet, Derese, Mitchell, Christopher J., Palapetta, Shyam M., Sharma, Jyoti, O'Meally, Robert N., Cole, Robert N., Yoda, Akinori, Moritz, Albrecht, Loriaux, Marc M., Rush, John, Weinstock, David M., Tyner, Jeffrey W., Pandey, Akhilesh
Publié 2012

Toward the human cellular microRNAome

par McCall, Matthew N., Kim, Min-Sik, Adil, Mohammed, Patil, Arun H., Lu, Yin, Mitchell, Christopher J., Leal-Rojas, Pamela, Xu, Jinchong, Kumar, Manoj, Dawson, Valina L., Dawson, Ted M., Baras, Alexander S., Rosenberg, Avi Z., Arking, Dan E., Burns, Kathleen H., Pandey, Akhilesh, Halushka, Marc K.
Publié dans Genome Res (2017)

Annotation of the Zebrafish Genome through an Integrated Transcriptomic and Proteomic Analysis

par Kelkar, Dhanashree S., Provost, Elayne, Chaerkady, Raghothama, Muthusamy, Babylakshmi, Manda, Srikanth S., Subbannayya, Tejaswini, Selvan, Lakshmi Dhevi N., Wang, Chieh-Huei, Datta, Keshava K., Woo, Sunghee, Dwivedi, Sutopa B., Renuse, Santosh, Getnet, Derese, Huang, Tai-Chung, Kim, Min-Sik, Pinto, Sneha M., Mitchell, Christopher J., Madugundu, Anil K., Kumar, Praveen, Sharma, Jyoti, Advani, Jayshree, Dey, Gourav, Balakrishnan, Lavanya, Syed, Nazia, Nanjappa, Vishalakshi, Subbannayya, Yashwanth, Goel, Renu, Keshava Prasad, T. S., Bafna, Vineet, Sirdeshmukh, Ravi, Gowda, Harsha, Wang, Charles, Leach, Steven D., Pandey, Akhilesh
Publié dans Mol Cell Proteomics (2014)

A multi-omic analysis of human naïve CD4+ T cells

par Mitchell, Christopher J., Getnet, Derese, Kim, Min-Sik, Manda, Srikanth S., Kumar, Praveen, Huang, Tai-Chung, Pinto, Sneha M., Nirujogi, Raja Sekhar, Iwasaki, Mio, Shaw, Patrick G., Wu, Xinyan, Zhong, Jun, Chaerkady, Raghothama, Marimuthu, Arivusudar, Muthusamy, Babylakshmi, Sahasrabuddhe, Nandini A., Raju, Rajesh, Bowman, Caitlyn, Danilova, Ludmila, Cutler, Jevon, Kelkar, Dhanashree S., Drake, Charles G., Prasad, T. S. Keshava, Marchionni, Luigi, Murakami, Peter N., Scott, Alan F., Shi, Leming, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Irizarry, Rafael, Cope, Leslie, Ishihama, Yasushi, Wang, Charles, Gowda, Harsha, Pandey, Akhilesh
Publié dans BMC Syst Biol (2015)

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes

par Prasad, T.S. Keshava, Mohanty, Ajeet Kumar, Kumar, Manish, Sreenivasamurthy, Sreelakshmi K., Dey, Gourav, Nirujogi, Raja Sekhar, Pinto, Sneha M., Madugundu, Anil K., Patil, Arun H., Advani, Jayshree, Manda, Srikanth S., Gupta, Manoj Kumar, Dwivedi, Sutopa B., Kelkar, Dhanashree S., Hall, Brantley, Jiang, Xiaofang, Peery, Ashley, Rajagopalan, Pavithra, Yelamanchi, Soujanya D., Solanki, Hitendra S., Raja, Remya, Sathe, Gajanan J., Chavan, Sandip, Verma, Renu, Patel, Krishna M., Jain, Ankit P., Syed, Nazia, Datta, Keshava K., Khan, Aafaque Ahmed, Dammalli, Manjunath, Jayaram, Savita, Radhakrishnan, Aneesha, Mitchell, Christopher J., Na, Chan-Hyun, Kumar, Nirbhay, Sinnis, Photini, Sharakhov, Igor V., Wang, Charles, Gowda, Harsha, Tu, Zhijian, Kumar, Ashwani, Pandey, Akhilesh
Publié dans Genome Res (2017)

A draft map of the human proteome

par Kim, Min-Sik, Pinto, Sneha M., Getnet, Derese, Nirujogi, Raja Sekhar, Manda, Srikanth S., Chaerkady, Raghothama, Madugundu, Anil K., Kelkar, Dhanashree S., Isserlin, Ruth, Jain, Shobhit, Thomas, Joji K., Muthusamy, Babylakshmi, Leal-Rojas, Pamela, Kumar, Praveen, Sahasrabuddhe, Nandini A., Balakrishnan, Lavanya, Advani, Jayshree, George, Bijesh, Renuse, Santosh, Selvan, Lakshmi Dhevi N., Patil, Arun H., Nanjappa, Vishalakshi, Radhakrishnan, Aneesha, Prasad, Samarjeet, Subbannayya, Tejaswini, Raju, Rajesh, Kumar, Manish, Sreenivasamurthy, Sreelakshmi K., Marimuthu, Arivusudar, Sathe, Gajanan J., Chavan, Sandip, Datta, Keshava K., Subbannayya, Yashwanth, Sahu, Apeksha, Yelamanchi, Soujanya D., Jayaram, Savita, Rajagopalan, Pavithra, Sharma, Jyoti, Murthy, Krishna R., Syed, Nazia, Goel, Renu, Khan, Aafaque A., Ahmad, Sartaj, Dey, Gourav, Mudgal, Keshav, Chatterjee, Aditi, Huang, Tai-Chung, Zhong, Jun, Wu, Xinyan, Shaw, Patrick G., Freed, Donald, Zahari, Muhammad S., Mukherjee, Kanchan K., Shankar, Subramanian, Mahadevan, Anita, Lam, Henry, Mitchell, Christopher J., Shankar, Susarla Krishna, Satishchandra, Parthasarathy, Schroeder, John T., Sirdeshmukh, Ravi, Maitra, Anirban, Leach, Steven D., Drake, Charles G., Halushka, Marc K., Prasad, T. S. Keshava, Hruban, Ralph H., Kerr, Candace L., Bader, Gary D., Iacobuzio-Donahue, Christine A., Gowda, Harsha, Pandey, Akhilesh
Publié dans Nature (2014)