Proteomic profiling of human intraschisis cavity fluid

由 Sudha, Dhandayuthapani, Kohansal-Nodehi, Mahdokht, Kovuri, Purnima, Manda, Srikanth Srinivas, Neriyanuri, Srividya, Gopal, Lingam, Bhende, Pramod, Chidambaram, Subbulakshmi, Arunachalam, Jayamuruga Pandian
發表在 Clin Proteomics (2017)

Tissue matrix arrays for high throughput screening and systems analysis of cell function

由 Beachley, Vince Z., Wolf, Matthew T., Sadtler, Kaitlyn, Manda, Srikanth S., Jacobs, Heather, Blatchley, Michael, Bader, Joel S., Pandey, Akhilesh, Pardoll, Drew, Elisseeff, Jennifer H.
發表在 Nat Methods (2015)

Phosphoproteomic Analysis Identifies Focal Adhesion Kinase 2 (FAK2) as a Potential Therapeutic Target for Tamoxifen Resistance in Breast Cancer

由 Wu, Xinyan, Zahari, Muhammad Saddiq, Renuse, Santosh, Nirujogi, Raja Sekhar, Kim, Min-Sik, Manda, Srikanth S., Stearns, Vered, Gabrielson, Edward, Sukumar, Saraswati, Pandey, Akhilesh
發表在 Mol Cell Proteomics (2015)

Quantitative phosphoproteomic analysis of IL-33 mediated signaling

由 Pinto, Sneha M., Nirujogi, Raja Sekhar, Rojas, Pamela Leal, Patil, Arun H., Manda, Srikanth S., Subbannayya, Yashwanth, Roa, Juan Carlos, Chatterjee, Aditi, Keshava Prasad, T. S., Pandey, Akhilesh
發表在 Proteomics (2015)

Functional Annotation of Proteome Encoded by Human Chromosome 22

由 Pinto, Sneha M., Manda, Srikanth S., Kim, Min-Sik, Taylor, KyOnese, Selvan, Lakshmi Dhevi Nagarajha, Balakrishnan, Lavanya, Subbannayya, Tejaswini, Yan, Fangfei, Prasad, T. S. Keshava, Gowda, Harsha, Lee, Charles, Hancock, William S., Pandey, Akhilesh
出版 2014

Phosphoproteomic Profiling Reveals Epstein-Barr Virus Protein Kinase Integration of DNA Damage Response and Mitotic Signaling

由 Li, Renfeng, Liao, Gangling, Nirujogi, Raja Sekhar, Pinto, Sneha M., Shaw, Patrick G., Huang, Tai-Chung, Wan, Jun, Qian, Jiang, Gowda, Harsha, Wu, Xinyan, Lv, Dong-Wen, Zhang, Kun, Manda, Srikanth S., Pandey, Akhilesh, Hayward, S. Diane
發表在 PLoS Pathog (2015)

Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms

由 Logan, Jayden, Pearson, Mark S., Manda, Srikanth S., Choi, Young-Jun, Field, Matthew, Eichenberger, Ramon M., Mulvenna, Jason, Nagaraj, Shivashankar H., Fujiwara, Ricardo T., Gazzinelli-Guimaraes, Pedro, Bueno, Lilian, Mati, Vitor, Bethony, Jeffrey M., Mitreva, Makedonka, Sotillo, Javier, Loukas, Alex
發表在 PLoS Negl Trop Dis (2020)

Proteomic analysis of human vitreous humor

由 Murthy, Krishna R, Goel, Renu, Subbannayya, Yashwanth, Jacob, Harrys KC, Murthy, Praveen R, Manda, Srikanth Srinivas, Patil, Arun H, Sharma, Rakesh, Sahasrabuddhe, Nandini A, Parashar, Arun, Nair, Bipin G, Krishna, Venkatarangaiah, Prasad, TS Keshava, Gowda, Harsha, Pandey, Akhilesh
出版 2014

Identification of differentially expressed serum proteins in gastric adenocarcinoma()

由 Subbannayya, Yashwanth, Mir, Sartaj Ahmad, Renuse, Santosh, Manda, Srikanth S., Pinto, Sneha M., Puttamallesh, Vinuth N., Solanki, Hitendra Singh, Manju, H.C., Syed, Nazia, Sharma, Rakesh, Christopher, Rita, Vijayakumar, M., Kumar, K.V. Veerendra, Prasad, T.S. Keshava, Ramaswamy, Girija, Kumar, Rekha V., Chatterjee, Aditi, Pandey, Akhilesh, Gowda, Harsha
發表在 J Proteomics (2015)

Proteomic analysis of human osteoarthritis synovial fluid

由 Balakrishnan, Lavanya, Nirujogi, Raja Sekhar, Ahmad, Sartaj, Bhattacharjee, Mitali, Manda, Srikanth S, Renuse, Santosh, Kelkar, Dhanashree S, Subbannayya, Yashwanth, Raju, Rajesh, Goel, Renu, Thomas, Joji Kurian, Kaur, Navjyot, Dhillon, Mukesh, Tankala, Shantal Gupta, Jois, Ramesh, Vasdev, Vivek, Ramachandra, YL, Sahasrabuddhe, Nandini A, Prasad, TS Keshava, Mohan, Sujatha, Gowda, Harsha, Shankar, Subramanian, Pandey, Akhilesh
出版 2014

Widespread somatic L1 retrotransposition occurs early during gastrointestinal cancer evolution

由 Ewing, Adam D., Gacita, Anthony, Wood, Laura D., Ma, Florence, Xing, Dongmei, Kim, Min-Sik, Manda, Srikanth S., Abril, Gabriela, Pereira, Gavin, Makohon-Moore, Alvin, Looijenga, Leendert H.J., Gillis, Ad J.M., Hruban, Ralph H., Anders, Robert A., Romans, Katharine E., Pandey, Akhilesh, Iacobuzio-Donahue, Christine A., Vogelstein, Bert, Kinzler, Kenneth W., Kazazian, Haig H., Solyom, Szilvia
發表在 Genome Res (2015)

Calcium calmodulin dependent kinase kinase 2 - a novel therapeutic target for gastric adenocarcinoma

由 Subbannayya, Yashwanth, Syed, Nazia, Barbhuiya, Mustafa A, Raja, Remya, Marimuthu, Arivusudar, Sahasrabuddhe, Nandini, Pinto, Sneha M, Manda, Srikanth Srinivas, Renuse, Santosh, Manju, HC, Zameer, Mohammed Abdul Lateef, Sharma, Jyoti, Brait, Mariana, Srikumar, Kotteazeth, Roa, Juan Carlos, Vijaya Kumar, M, Kumar, KV Veerendra, Prasad, TS Keshava, Ramaswamy, Girija, Kumar, Rekha Vijay, Pandey, Akhilesh, Gowda, Harsha, Chatterjee, Aditi
發表在 Cancer Biol Ther (2015)

Strategies to enable large-scale proteomics for reproducible research

由 Poulos, Rebecca C., Hains, Peter G., Shah, Rohan, Lucas, Natasha, Xavier, Dylan, Manda, Srikanth S., Anees, Asim, Koh, Jennifer M. S., Mahboob, Sadia, Wittman, Max, Williams, Steven G., Sykes, Erin K., Hecker, Michael, Dausmann, Michael, Wouters, Merridee A., Ashman, Keith, Yang, Jean, Wild, Peter J., deFazio, Anna, Balleine, Rosemary L., Tully, Brett, Aebersold, Ruedi, Speed, Terence P., Liu, Yansheng, Reddel, Roger R., Robinson, Phillip J., Zhong, Qing
發表在 Nat Commun (2020)

Annotation of the Zebrafish Genome through an Integrated Transcriptomic and Proteomic Analysis

由 Kelkar, Dhanashree S., Provost, Elayne, Chaerkady, Raghothama, Muthusamy, Babylakshmi, Manda, Srikanth S., Subbannayya, Tejaswini, Selvan, Lakshmi Dhevi N., Wang, Chieh-Huei, Datta, Keshava K., Woo, Sunghee, Dwivedi, Sutopa B., Renuse, Santosh, Getnet, Derese, Huang, Tai-Chung, Kim, Min-Sik, Pinto, Sneha M., Mitchell, Christopher J., Madugundu, Anil K., Kumar, Praveen, Sharma, Jyoti, Advani, Jayshree, Dey, Gourav, Balakrishnan, Lavanya, Syed, Nazia, Nanjappa, Vishalakshi, Subbannayya, Yashwanth, Goel, Renu, Keshava Prasad, T. S., Bafna, Vineet, Sirdeshmukh, Ravi, Gowda, Harsha, Wang, Charles, Leach, Steven D., Pandey, Akhilesh
發表在 Mol Cell Proteomics (2014)

A multi-omic analysis of human naïve CD4+ T cells

由 Mitchell, Christopher J., Getnet, Derese, Kim, Min-Sik, Manda, Srikanth S., Kumar, Praveen, Huang, Tai-Chung, Pinto, Sneha M., Nirujogi, Raja Sekhar, Iwasaki, Mio, Shaw, Patrick G., Wu, Xinyan, Zhong, Jun, Chaerkady, Raghothama, Marimuthu, Arivusudar, Muthusamy, Babylakshmi, Sahasrabuddhe, Nandini A., Raju, Rajesh, Bowman, Caitlyn, Danilova, Ludmila, Cutler, Jevon, Kelkar, Dhanashree S., Drake, Charles G., Prasad, T. S. Keshava, Marchionni, Luigi, Murakami, Peter N., Scott, Alan F., Shi, Leming, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Irizarry, Rafael, Cope, Leslie, Ishihama, Yasushi, Wang, Charles, Gowda, Harsha, Pandey, Akhilesh
發表在 BMC Syst Biol (2015)

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes

由 Prasad, T.S. Keshava, Mohanty, Ajeet Kumar, Kumar, Manish, Sreenivasamurthy, Sreelakshmi K., Dey, Gourav, Nirujogi, Raja Sekhar, Pinto, Sneha M., Madugundu, Anil K., Patil, Arun H., Advani, Jayshree, Manda, Srikanth S., Gupta, Manoj Kumar, Dwivedi, Sutopa B., Kelkar, Dhanashree S., Hall, Brantley, Jiang, Xiaofang, Peery, Ashley, Rajagopalan, Pavithra, Yelamanchi, Soujanya D., Solanki, Hitendra S., Raja, Remya, Sathe, Gajanan J., Chavan, Sandip, Verma, Renu, Patel, Krishna M., Jain, Ankit P., Syed, Nazia, Datta, Keshava K., Khan, Aafaque Ahmed, Dammalli, Manjunath, Jayaram, Savita, Radhakrishnan, Aneesha, Mitchell, Christopher J., Na, Chan-Hyun, Kumar, Nirbhay, Sinnis, Photini, Sharakhov, Igor V., Wang, Charles, Gowda, Harsha, Tu, Zhijian, Kumar, Ashwani, Pandey, Akhilesh
發表在 Genome Res (2017)

A draft map of the human proteome

由 Kim, Min-Sik, Pinto, Sneha M., Getnet, Derese, Nirujogi, Raja Sekhar, Manda, Srikanth S., Chaerkady, Raghothama, Madugundu, Anil K., Kelkar, Dhanashree S., Isserlin, Ruth, Jain, Shobhit, Thomas, Joji K., Muthusamy, Babylakshmi, Leal-Rojas, Pamela, Kumar, Praveen, Sahasrabuddhe, Nandini A., Balakrishnan, Lavanya, Advani, Jayshree, George, Bijesh, Renuse, Santosh, Selvan, Lakshmi Dhevi N., Patil, Arun H., Nanjappa, Vishalakshi, Radhakrishnan, Aneesha, Prasad, Samarjeet, Subbannayya, Tejaswini, Raju, Rajesh, Kumar, Manish, Sreenivasamurthy, Sreelakshmi K., Marimuthu, Arivusudar, Sathe, Gajanan J., Chavan, Sandip, Datta, Keshava K., Subbannayya, Yashwanth, Sahu, Apeksha, Yelamanchi, Soujanya D., Jayaram, Savita, Rajagopalan, Pavithra, Sharma, Jyoti, Murthy, Krishna R., Syed, Nazia, Goel, Renu, Khan, Aafaque A., Ahmad, Sartaj, Dey, Gourav, Mudgal, Keshav, Chatterjee, Aditi, Huang, Tai-Chung, Zhong, Jun, Wu, Xinyan, Shaw, Patrick G., Freed, Donald, Zahari, Muhammad S., Mukherjee, Kanchan K., Shankar, Subramanian, Mahadevan, Anita, Lam, Henry, Mitchell, Christopher J., Shankar, Susarla Krishna, Satishchandra, Parthasarathy, Schroeder, John T., Sirdeshmukh, Ravi, Maitra, Anirban, Leach, Steven D., Drake, Charles G., Halushka, Marc K., Prasad, T. S. Keshava, Hruban, Ralph H., Kerr, Candace L., Bader, Gary D., Iacobuzio-Donahue, Christine A., Gowda, Harsha, Pandey, Akhilesh
發表在 Nature (2014)