Biophysical constraints on lateral inhibition in the olfactory bulb

per McIntyre, Alexa B. R., Cleland, Thomas A.
Publicat a J Neurophysiol (2016)

Evolutionary dynamics of microRNA target sites across vertebrate evolution

per Simkin, Alfred, Geissler, Rene, McIntyre, Alexa B. R., Grimson, Andrew
Publicat a PLoS Genet (2020)

Clinical Genomics: Challenges and Opportunities

per Vijay, Priyanka, McIntyre, Alexa B.R., Mason, Christopher E., Greenfield, Jeffrey P., Li, Sheng
Publicat a Crit Rev Eukaryot Gene Expr (2016)

Methods and Tools for MeRIP-Seq and Nanopore Detection of m6A(m) Changes

per Mason, Christopher E., McIntyre, Alexa B.R., Gokhale, Nandan S., Cerchietti, Leandro, Horner, Stacy M.
Publicat a J Biomol Tech (2019)

Limits in the detection of m(6)A changes using MeRIP/m(6)A-seq

per McIntyre, Alexa B. R., Gokhale, Nandan S., Cerchietti, Leandro, Jaffrey, Samie R., Horner, Stacy M., Mason, Christopher E.
Publicat a Sci Rep (2020)

Single-molecule sequencing detection of N6-methyladenine in microbial reference materials

per McIntyre, Alexa B. R., Alexander, Noah, Grigorev, Kirill, Bezdan, Daniela, Sichtig, Heike, Chiu, Charles Y., Mason, Christopher E.
Publicat a Nat Commun (2019)

Altered m(6)A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection

per Gokhale, Nandan S., McIntyre, Alexa B.R., Mattocks, Melissa D., Holley, Christopher L., Lazear, Helen M., Mason, Christopher E., Horner, Stacy M.
Publicat a Mol Cell (2019)

Post-transcriptional regulation of antiviral gene expression by N6-methyladenosine

per McFadden, Michael J., McIntyre, Alexa B.R., Mourelatos, Haralambos, Abell, Nathan S., Gokhale, Nandan S., Ipas, Hélène, Xhemalçe, Blerta, Mason, Christopher E., Horner, Stacy M.
Publicat a Cell Rep (2021)

N6-methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle

per Imam, Hasan, Khan, Mohsin, Gokhale, Nandan S., McIntyre, Alexa B. R., Kim, Geon-Woo, Jang, Jae Young, Kim, Seong-Jun, Mason, Christopher E., Horner, Stacy M., Siddiqui, Aleem
Publicat a Proc Natl Acad Sci U S A (2018)

Direct RNA sequencing reveals m(6)A modifications on adenovirus RNA are necessary for efficient splicing

per Price, Alexander M., Hayer, Katharina E., McIntyre, Alexa B. R., Gokhale, Nandan S., Abebe, Jonathan S., Della Fera, Ashley N., Mason, Christopher E., Horner, Stacy M., Wilson, Angus C., Depledge, Daniel P., Weitzman, Matthew D.
Publicat a Nat Commun (2020)

Nanopore sequencing in microgravity

per McIntyre, Alexa B R, Rizzardi, Lindsay, Yu, Angela M, Alexander, Noah, Rosen, Gail L, Botkin, Douglas J, Stahl, Sarah E, John, Kristen K, Castro-Wallace, Sarah L, McGrath, Ken, Burton, Aaron S, Feinberg, Andrew P, Mason, Christopher E
Publicat a NPJ Microgravity (2016)

Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

per McIntyre, Alexa B. R., Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert J., Hénaff, Elizabeth, Alexander, Noah, Minot, Samuel S., Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur A., Subramanian, Poorani, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita R., Rosen, Gail L., Mason, Christopher E.
Publicat a Genome Biol (2017)

Correction to: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

per McIntyre, Alexa B. R., Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert J., Hénaff, Elizabeth, Alexander, Noah, Minot, Samuel S., Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur A., Subramanian, Poorani, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita R., Rosen, Gail L., Mason, Christopher E.
Publicat a Genome Biol (2019)

N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection

per Gokhale, Nandan S., McIntyre, Alexa B.R., McFadden, Michael J., Roder, Allison E., Kennedy, Edward M., Gandara, Jorge A., Hopcraft, Sharon E., Quicke, Kendra M., Vazquez, Christine, Willer, Jason, Ilkayeva, Olga R., Law, Brittany A., Holley, Christopher L., Garcia-Blanco, Mariano A., Evans, Matthew J., Suthar, Mehul S., Bradrick, Shelton S., Mason, Christopher E., Horner, Stacy M.
Publicat a Cell Host Microbe (2016)

Nanopore DNA Sequencing and Genome Assembly on the International Space Station

per Castro-Wallace, Sarah L., Chiu, Charles Y., John, Kristen K., Stahl, Sarah E., Rubins, Kathleen H., McIntyre, Alexa B. R., Dworkin, Jason P., Lupisella, Mark L., Smith, David J., Botkin, Douglas J., Stephenson, Timothy A., Juul, Sissel, Turner, Daniel J., Izquierdo, Fernando, Federman, Scot, Stryke, Doug, Somasekar, Sneha, Alexander, Noah, Yu, Guixia, Mason, Christopher E., Burton, Aaron S.
Publicat a Sci Rep (2017)

Extensive sequencing of seven human genomes to characterize benchmark reference materials

per Zook, Justin M., Catoe, David, McDaniel, Jennifer, Vang, Lindsay, Spies, Noah, Sidow, Arend, Weng, Ziming, Liu, Yuling, Mason, Christopher E., Alexander, Noah, Henaff, Elizabeth, McIntyre, Alexa B.R., Chandramohan, Dhruva, Chen, Feng, Jaeger, Erich, Moshrefi, Ali, Pham, Khoa, Stedman, William, Liang, Tiffany, Saghbini, Michael, Dzakula, Zeljko, Hastie, Alex, Cao, Han, Deikus, Gintaras, Schadt, Eric, Sebra, Robert, Bashir, Ali, Truty, Rebecca M., Chang, Christopher C., Gulbahce, Natali, Zhao, Keyan, Ghosh, Srinka, Hyland, Fiona, Fu, Yutao, Chaisson, Mark, Xiao, Chunlin, Trow, Jonathan, Sherry, Stephen T., Zaranek, Alexander W., Ball, Madeleine, Bobe, Jason, Estep, Preston, Church, George M., Marks, Patrick, Kyriazopoulou-Panagiotopoulou, Sofia, Zheng, Grace X.Y., Schnall-Levin, Michael, Ordonez, Heather S., Mudivarti, Patrice A., Giorda, Kristina, Sheng, Ying, Rypdal, Karoline Bjarnesdatter, Salit, Marc
Publicat a Sci Data (2016)