Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

BACKGROUND: One of the main challenges in metagenomics is the identification of microorganisms in clinical and environmental samples. While an extensive and heterogeneous set of computational tools is available to classify microorganisms using whole-genome shotgun sequencing data, comprehensive comp...

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Detalles Bibliográficos
Publicado en:Genome Biol
Main Authors: McIntyre, Alexa B. R., Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert J., Hénaff, Elizabeth, Alexander, Noah, Minot, Samuel S., Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur A., Subramanian, Poorani, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita R., Rosen, Gail L., Mason, Christopher E.
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2017
Assuntos:
Research
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC5609029/
https://ncbi.nlm.nih.gov/pubmed/28934964
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-017-1299-7
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