Ribosome profiling reveals post-transcriptional buffering of divergent gene expression in yeast

le McManus, C. Joel, May, Gemma E., Spealman, Pieter, Shteyman, Alan
Foilsithe 2014

Competing RNA secondary structures are required for mutually exclusive splicing of the Dscam exon 6 cluster

le May, Gemma E., Olson, Sara, McManus, C. Joel, Graveley, Brenton R.
Foilsithe 2011

Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data

le Spealman, Pieter, Naik, Armaghan W., May, Gemma E., Kuersten, Scott, Freeberg, Lindsay, Murphy, Robert F., McManus, Joel
Foilsithe in Genome Res (2018)

Impacts of uORF codon identity and position on translation regulation

le Lin, Yizhu, May, Gemma E, Kready, Hunter, Nazzaro, Lauren, Mao, Mao, Spealman, Pieter, Creeger, Yehuda, McManus, C Joel
Foilsithe in Nucleic Acids Res (2019)

The High-Frequency Major Histocompatibility Complex Class I Allele Mamu-B(*)17 Is Associated with Control of Simian Immunodeficiency Virus SIVmac239 Replication

le Yant, Levi J., Friedrich, Thomas C., Johnson, Randall C., May, Gemma E., Maness, Nicholas J., Enz, Alissa M., Lifson, Jeffrey D., O'Connor, David H., Carrington, Mary, Watkins, David I.
Foilsithe 2006

The High-Frequency Major Histocompatibility Complex (MHC) Class I Allele Mamu-B*17 Is Associated with Control of Simian Immunodeficiency Virus SIVmac239 Replication

le Yant, Levi J., Friedrich, Thomas C., Johnson, Randall C., May, Gemma E., Maness, Nicholas J., Enz, Alissa M., Lifson, Jeffrey D., O'Connor, David H., Carrington, Mary, Watkins, David I.
Foilsithe 2006

Novel Translation Products from Simian Immunodeficiency Virus SIVmac239 Env-Encoding mRNA Contain both Rev and Cryptic T-Cell Epitopes

le Maness, Nicholas J., Sacha, Jonah B., Piaskowski, Shari M., Weisgrau, Kimberly L., Rakasz, Eva G., May, Gemma E., Buechler, Matthew B., Walsh, Andrew D., Wilson, Nancy A., Watkins, David I.
Foilsithe 2009

Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila

le Stoiber, Marcus H., Olson, Sara, May, Gemma E., Duff, Michael O., Manent, Jan, Obar, Robert, Guruharsha, K.G., Bickel, Peter J., Artavanis-Tsakonas, Spyros, Brown, James B., Graveley, Brenton R., Celniker, Susan E.
Foilsithe in Genome Res (2015)

Patterns of CD8(+) Immunodominance May Influence the Ability of Mamu-B*08-Positive Macaques To Naturally Control Simian Immunodeficiency Virus SIVmac239 Replication

le Loffredo, John T., Bean, Alex T., Beal, Dominic R., León, Enrique J., May, Gemma E., Piaskowski, Shari M., Furlott, Jessica R., Reed, Jason, Musani, Solomon K., Rakasz, Eva G., Friedrich, Thomas C., Wilson, Nancy A., Allison, David B., Watkins, David I.
Foilsithe 2008

Comprehensive Immunological Evaluation Reveals Surprisingly Few Differences between Elite Controller and Progressor Mamu-B*17-Positive Simian Immunodeficiency Virus-Infected Rhesus...

le Maness, Nicholas J., Yant, Levi J., Chung, Chungwon, Loffredo, John T., Friedrich, Thomas C., Piaskowski, Shari M., Furlott, Jessica, May, Gemma E., Soma, Taeko, León, Enrique J., Wilson, Nancy A., Piontkivska, Helen, Hughes, Austin L., Sidney, John, Sette, Alessandro, Watkins, David I.
Foilsithe 2008

Macaque Long-Term Nonprogressors Resist Superinfection with Multiple CD8(+) T Cell Escape Variants of Simian Immunodeficiency Virus

le Weinfurter, Jason T., May, Gemma E., Soma, Taeko, Hessell, Ann J., León, Enrique J., MacNair, Caitlin E., Piaskowski, Shari M., Weisgrau, Kim, Furlott, Jessica, Maness, Nicholas J., Reed, Jason, Wilson, Nancy A., Rakasz, Eva G., Burton, Dennis R., Friedrich, Thomas C.
Foilsithe 2011

Subdominant CD8(+) T-Cell Responses Are Involved in Durable Control of AIDS Virus Replication

le Friedrich, Thomas C., Valentine, Laura E., Yant, Levi J., Rakasz, Eva G., Piaskowski, Shari M., Furlott, Jessica R., Weisgrau, Kimberly L., Burwitz, Benjamin, May, Gemma E., León, Enrique J., Soma, Taeko, Napoe, Gnankang, Capuano, Saverio V., Wilson, Nancy A., Watkins, David I.
Foilsithe 2007

AIDS virus–specific CD8(+) T lymphocytes against an immunodominant cryptic epitope select for viral escape

le Maness, Nicholas J., Valentine, Laura E., May, Gemma E., Reed, Jason, Piaskowski, Shari M., Soma, Taeko, Furlott, Jessica, Rakasz, Eva G., Friedrich, Thomas C., Price, David A., Gostick, Emma, Hughes, Austin L., Sidney, John, Sette, Alessandro, Wilson, Nancy A., Watkins, David I.
Foilsithe 2007

Infection with “Escaped” Virus Variants Impairs Control of Simian Immunodeficiency Virus SIVmac239 Replication in Mamu-B*08-Positive Macaques

le Valentine, Laura E., Loffredo, John T., Bean, Alex T., León, Enrique J., MacNair, Caitlin E., Beal, Dominic R., Piaskowski, Shari M., Klimentidis, Yann C., Lank, Simon M., Wiseman, Roger W., Weinfurter, Jason T., May, Gemma E., Rakasz, Eva G., Wilson, Nancy A., Friedrich, Thomas C., O'Connor, David H., Allison, David B., Watkins, David I.
Foilsithe 2009

CD8(+) T Cells from SIV Elite Controller Macaques Recognize Mamu-B*08-Bound Epitopes and Select for Widespread Viral Variation

le Loffredo, John T., Friedrich, Thomas C., León, Enrique J., Stephany, Jason J., Rodrigues, Denise S., Spencer, Sean P., Bean, Alex T., Beal, Dominic R., Burwitz, Benjamin J., Rudersdorf, Richard A., Wallace, Lyle T., Piaskowski, Shari M., May, Gemma E., Sidney, John, Gostick, Emma, Wilson, Nancy A., Price, David A., Kallas, Esper G., Piontkivska, Helen, Hughes, Austin L., Sette, Alessandro, Watkins, David I.
Foilsithe 2007

Vaccine-Induced Cellular Immune Responses Reduce Plasma Viral Concentrations after Repeated Low-Dose Challenge with Pathogenic Simian Immunodeficiency Virus SIVmac239

le Wilson, Nancy A., Reed, Jason, Napoe, Gnankang S., Piaskowski, Shari, Szymanski, Andy, Furlott, Jessica, Gonzalez, Edna J., Yant, Levi J., Maness, Nicholas J., May, Gemma E., Soma, Taeko, Reynolds, Matthew R., Rakasz, Eva, Rudersdorf, Richard, McDermott, Adrian B., O'Connor, David H., Friedrich, Thomas C., Allison, David B., Patki, Amit, Picker, Louis J., Burton, Dennis R., Lin, Jing, Huang, Lingyi, Patel, Deepa, Heindecker, Gwendolyn, Fan, Jiang, Citron, Michael, Horton, Melanie, Wang, Fubao, Liang, Xiaoping, Shiver, John W., Casimiro, Danilo R., Watkins, David I.
Foilsithe 2006

Diversity and dynamics of the Drosophila transcriptome

le Brown, James B., Boley, Nathan, Eisman, Robert, May, Gemma E., Stoiber, Marcus H., Duff, Michael O., Booth, Ben W., Wen, Jiayu, Park, Soo, Suzuki, Ana Maria, Wan, Kenneth H., Yu, Charles, Zhang, Dayu, Carlson, Joseph W., Cherbas, Lucy, Eads, Brian D., Miller, David, Mockaitis, Keithanne, Roberts, Johnny, Davis, Carrie A., Frise, Erwin, Hammonds, Ann S., Olson, Sara, Shenker, Sol, Sturgill, David, Samsonova, Anastasia A., Weiszmann, Richard, Robinson, Garret, Hernandez, Juan, Andrews, Justen, Bickel, Peter J., Carninci, Piero, Cherbas, Peter, Gingeras, Thomas R., Hoskins, Roger A., Kaufman, Thomas C., Lai, Eric C., Oliver, Brian, Perrimon, Norbert, Graveley, Brenton R., Celniker, Susan E.
Foilsithe 2014