Exploring intermediate cell states through the lens of single cells

Tekijä MacLean, Adam L., Hong, Tian, Nie, Qing
Julkaisussa Curr Opin Syst Biol (2018)

The ecology in the hematopoietic stem cell niche determines the clinical outcome in chronic myeloid leukemia

Tekijä MacLean, Adam L., Filippi, Sarah, Stumpf, Michael P. H.
Julkaistu 2014

Cell lineage and communication network inference via optimization for single-cell transcriptomics

Tekijä Wang, Shuxiong, Karikomi, Matthew, MacLean, Adam L, Nie, Qing
Julkaisussa Nucleic Acids Res (2019)

scEpath: energy landscape-based inference of transition probabilities and cellular trajectories from single-cell transcriptomic data

Tekijä Jin, Suoqin, MacLean, Adam L, Peng, Tao, Nie, Qing
Julkaisussa Bioinformatics (2018)

Population dynamics of normal and leukaemia stem cells in the haematopoietic stem cell niche show distinct regimes where leukaemia will be controlled

Tekijä MacLean, Adam L., Lo Celso, Cristina, Stumpf, Michael P. H.
Julkaistu 2013

Feedback mechanisms control coexistence in a stem cell model of acute myeloid leukaemia

Tekijä Crowell, Helena L., MacLean, Adam L., Stumpf, Michael P.H.
Julkaisussa J Theor Biol (2016)

Parameter-free methods distinguish Wnt pathway models and guide design of experiments

Tekijä MacLean, Adam L., Rosen, Zvi, Byrne, Helen M., Harrington, Heather A.
Julkaisussa Proc Natl Acad Sci U S A (2015)

Cellular population dynamics control the robustness of the stem cell niche

Tekijä MacLean, Adam L., Kirk, Paul D. W., Stumpf, Michael P. H.
Julkaisussa Biol Open (2015)

Epithelial-Mesenchymal Transition in Metastatic Cancer Cell Populations Affects Tumor Dormancy in a Simple Mathematical Model

Tekijä MacLean, Adam L., Harrington, Heather A., Stumpf, Michael P. H., Hansen, Marc D. H.
Julkaisussa Biomedicines (2014)

A mathematical model of mechanotransduction reveals how mechanical memory regulates mesenchymal stem cell fate decisions

Tekijä Peng, Tao, Liu, Linan, MacLean, Adam L, Wong, Chi Wut, Zhao, Weian, Nie, Qing
Julkaisussa BMC Syst Biol (2017)

Transcriptomics reveals complex kinetics of dorsal-ventral patterning gene expression in the mandibular arch

Tekijä Sharma, Praveer P., MacLean, Adam L., Meinecke, Lina, Clouthier, David E., Nie, Qing, Schilling, Thomas F.
Julkaisussa Genesis (2018)

Bayesian inference of agent-based models: a tool for studying kidney branching morphogenesis

Tekijä Lambert, Ben, MacLean, Adam L., Fletcher, Alexander G., Combes, Alexander N., Little, Melissa H., Byrne, Helen M.
Julkaisussa J Math Biol (2018)

An Ovol2‐Zeb1 transcriptional circuit regulates epithelial directional migration and proliferation

Tekijä Haensel, Daniel, Sun, Peng, MacLean, Adam L, Ma, Xianghui, Zhou, Yuan, Stemmler, Marc P, Brabletz, Simone, Berx, Geert, Plikus, Maksim V, Nie, Qing, Brabletz, Thomas, Dai, Xing
Julkaisussa EMBO Rep (2018)

Systematic tracking of altered haematopoiesis during sporozoite-mediated malaria development reveals multiple response points

Tekijä Vainieri, Maria L., Blagborough, Andrew M., MacLean, Adam L., Haltalli, Myriam L. R., Ruivo, Nicola, Fletcher, Helen A., Stumpf, Michael P. H., Sinden, Robert E., Lo Celso, Cristina
Julkaisussa Open Biol (2016)

Defining Epidermal Basal Cell States during Skin Homeostasis and Wound Healing Using Single-Cell Transcriptomics

Tekijä Haensel, Daniel, Jin, Suoqin, Sun, Peng, Cinco, Rachel, Dragan, Morgan, Nguyen, Quy, Cang, Zixuan, Gong, Yanwen, Vu, Remy, MacLean, Adam L., Kessenbrock, Kai, Gratton, Enrico, Nie, Qing, Dai, Xing
Julkaisussa Cell Rep (2020)

Single cell transcriptomics of human epidermis identifies basal stem cell transition states

Tekijä Wang, Shuxiong, Drummond, Michael L., Guerrero-Juarez, Christian F., Tarapore, Eric, MacLean, Adam L., Stabell, Adam R., Wu, Stephanie C., Gutierrez, Guadalupe, That, Bao T., Benavente, Claudia A., Nie, Qing, Atwood, Scott X.
Julkaisussa Nat Commun (2020)

Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure

Tekijä Rando, Halie M., MacLean, Adam L., Lee, Alexandra J., Lordan, Ronan, Ray, Sandipan, Bansal, Vikas, Skelly, Ashwin N., Sell, Elizabeth, Dziak, John J., Shinholster, Lamonica, McGowan, Lucy D’Agostino, Guebila, Marouen Ben, Wellhausen, Nils, Knyazev, Sergey, Boca, Simina M., Capone, Stephen, Qi, Yanjun, Park, YoSon, Sun, Yuchen, Mai, David, Boerckel, Joel D, Brueffer, Christian, Byrd, James Brian, Kamil, Jeremy P., Wang, Jinhui, Velazquez, Ryan, Szeto, Gregory L, Barton, John P., Goel, Rishi Raj, Mangul, Serghei, Lubiana, Tiago, Gitter, Anthony, Greene, Casey S.
Julkaisussa ArXiv (2021)