Resolution-adapted recombination of structural features significantly improves sampling in restraint-guided structure calculation

gan Lange, Oliver F, Baker, David
Cyhoeddwyd 2012

Replica Exchange Improves Sampling in Low-Resolution Docking Stage of RosettaDock

gan Zhang, Zhe, Lange, Oliver F.
Cyhoeddwyd 2013

Estimating Absolute Configurational Entropies of Macromolecules: The Minimally Coupled Subspace Approach

gan Hensen, Ulf, Lange, Oliver F., Grubmüller, Helmut
Cyhoeddwyd 2010

Combining Evolutionary Information and an Iterative Sampling Strategy for Accurate Protein Structure Prediction

gan Braun, Tatjana, Koehler Leman, Julia, Lange, Oliver F.
Cyhoeddwyd yn PLoS Comput Biol (2015)

A Framework to Simplify Combined Sampling Strategies in Rosetta

gan Porter, Justin R., Weitzner, Brian D., Lange, Oliver F.
Cyhoeddwyd yn PLoS One (2015)

Scrutinizing Molecular Mechanics Force Fields on the Submicrosecond Timescale with NMR Data

gan Lange, Oliver F., van der Spoel, David, de Groot, Bert L.
Cyhoeddwyd 2010

Differential global structural changes in the core particle of yeast and mouse proteasome induced by ligand binding

gan Arciniega, Marcelino, Beck, Philipp, Lange, Oliver F., Groll, Michael, Huber, Robert
Cyhoeddwyd 2014

Application of Enhanced Sampling Monte Carlo Methods for High-Resolution Protein-Protein Docking in Rosetta

gan Zhang, Zhe, Schindler, Christina E. M., Lange, Oliver F., Zacharias, Martin
Cyhoeddwyd yn PLoS One (2015)

Structure of the BamC two-domain protein obtained by Rosetta with a limited NMR data set

gan Warner, Lisa R., Varga, Krisztina, Lange, Oliver F., Baker, Susan L., Baker, David, Sousa, Marcelo C., Pardi, Arthur
Cyhoeddwyd 2011

Side-binding proteins modulate actin filament dynamics

gan Crevenna, Alvaro H, Arciniega, Marcelino, Dupont, Aurélie, Mizuno, Naoko, Kowalska, Kaja, Lange, Oliver F, Wedlich-Söldner, Roland, Lamb, Don C
Cyhoeddwyd yn eLife (2015)

A Mechanism for the Auto-inhibition of Hyperpolarization-activated Cyclic Nucleotide-gated (HCN) Channel Opening and Its Relief by cAMP

gan Akimoto, Madoka, Zhang, Zaiyong, Boulton, Stephen, Selvaratnam, Rajeevan, VanSchouwen, Bryan, Gloyd, Melanie, Accili, Eric A., Lange, Oliver F., Melacini, Giuseppe
Cyhoeddwyd 2014

Determination of the Structures of Symmetric Protein Oligomers from NMR Chemical Shifts and Residual Dipolar Couplings

gan Sgourakis, Nikolaos G., Lange, Oliver F., DiMaio, Frank, André, Ingemar, Fitzkee, Nicholas C., Rossi, Paolo, Montelione, Gaetano T., Bax, Ad, Baker, David
Cyhoeddwyd 2011

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples

gan Lange, Oliver F., Rossi, Paolo, Sgourakis, Nikolaos G., Song, Yifan, Lee, Hsiau-Wei, Aramini, James M., Ertekin, Asli, Xiao, Rong, Acton, Thomas B., Montelione, Gaetano T., Baker, David
Cyhoeddwyd 2012

Self-consistent residual dipolar coupling based model-free analysis for the robust determination of nanosecond to microsecond protein dynamics

gan Lakomek, Nils-Alexander, Walter, Korvin F. A., Farès, Christophe, Lange, Oliver F., de Groot, Bert L., Grubmüller, Helmut, Brüschweiler, Rafael, Munk, Axel, Becker, Stefan, Meiler, Jens, Griesinger, Christian
Cyhoeddwyd 2008

NMR Structure Determination for Larger Proteins Using Backbone-Only Data

gan Raman, Srivatsan, Lange, Oliver F., Rossi, Paolo, Tyka, Michael, Wang, Xu, Aramini, James, Liu, Gaohua, Ramelot, Theresa, Eletsky, Alexander, Szyperski, Thomas, Kennedy, Michael, Prestegard, James, Montelione, Gaetano T., Baker, David
Cyhoeddwyd 2010

A hybrid NMR/SAXS-based approach for discriminating oligomeric protein interfaces using Rosetta

gan Rossi, Paolo, Shi, Lei, Liu, Gaohua, Barbieri, Christopher M., Lee, Hsiau-Wei, Grant, Thomas D., Luft, Joseph R., Xiao, Rong, Acton, Thomas B., Snell, Edward H., Montelione, Gaetano T., Baker, David, Lange, Oliver F., Sgourakis, Nikolaos G.
Cyhoeddwyd yn Proteins (2014)

NMR Exchange Format: a unified and open standard for representation of NMR restraint data

gan Gutmanas, Aleksandras, Adams, Paul D, Bardiaux, Benjamin, Berman, Helen M, Case, David A, Fogh, Rasmus H, Güntert, Peter, Hendrickx, Pieter M S, Herrmann, Torsten, Kleywegt, Gerard J, Kobayashi, Naohiro, Lange, Oliver F, Markley, John L, Montelione, Gaetano T, Nilges, Michael, Ragan, Timothy J, Schwieters, Charles D, Tejero, Roberto, Ulrich, Eldon L, Velankar, Sameer, Vranken, Wim F, Wedell, Jonathan R, Westbrook, John, Wishart, David S, Vuister, Geerten W
Cyhoeddwyd yn Nat Struct Mol Biol (2015)

Rosetta3: An Object-Oriented Software Suite for the Simulation and Design of Macromolecules

gan Leaver-Fay, Andrew, Tyka, Michael, Lewis, Steven M., Lange, Oliver F., Thompson, James, Jacak, Ron, Kaufman, Kristian, Renfrew, P. Douglas, Smith, Colin A., Sheffler, Will, Davis, Ian W., Cooper, Seth, Treuille, Adrien, Mandell, Daniel J., Richter, Florian, Ban, Yih-En Andrew, Fleishman, Sarel J., Corn, Jacob E., Kim, David E., Lyskov, Sergey, Berrondo, Monica, Mentzer, Stuart, Popović, Zoran, Havranek, James J., Karanicolas, John, Das, Rhiju, Meiler, Jens, Kortemme, Tanja, Gray, Jeffrey J., Kuhlman, Brian, Baker, David, Bradley, Philip
Cyhoeddwyd 2011

Blind testing of routine, fully automated determination of protein structures from NMR data

gan Rosato, Antonio, Aramini, James M., Arrowsmith, Cheryl, Bagaria, Anurag, Baker, David, Cavalli, Andrea, Doreleijers, Jurgen F., Eletsky, Alexander, Giachetti, Andrea, Guerry, Paul, Gutmanas, Aleksandras, Güntert, Peter, He, Yunfen, Herrmann, Torsten, Huang, Yuanpeng J., Jaravine, Victor, Jonker, Hendrik R.A., Kennedy, Michael A., Lange, Oliver F., Liu, Gaohua, Malliavin, Thérèse E., Mani, Rajeswari, Mao, Binchen, Montelione, Gaetano T., Nilges, Michael, Rossi, Paolo, van der Schot, Gijs, Schwalbe, Harald, Szyperski, Thomas A., Vendruscolo, Michele, Vernon, Robert, Vranken, Wim F., de Vries, Sjoerd, Vuister, Geerten W., Wu, Bin, Yang, Yunhuang, Bonvin, Alexandre M.J.J.
Cyhoeddwyd 2012