Design, analysis and test of logic circuits under uncertainty

Por Krishnaswamy, Smita., Markov, Igor L., Hayes, John P.
Publicado em 2013

Harmonic Alignment

Por Stanley, Jay S., Gigante, Scott, Wolf, Guy, Krishnaswamy, Smita
Publicado no Proc SIAM Int Conf Data Min (2020)

Learning time-varying information flow from single-cell epithelial to mesenchymal transition data

Por Krishnaswamy, Smita, Zivanovic, Nevena, Sharma, Roshan, Pe’er, Dana, Bodenmiller, Bernd
Publicado no PLoS One (2018)

Uncovering axes of variation among single-cell cancer specimens

Por Chen, William S., Zivanovic, Nevena, van Dijk, David, Wolf, Guy, Bodenmiller, Bernd, Krishnaswamy, Smita
Publicado no Nat Methods (2020)

Diffusion Earth Mover's Distance and Distribution Embeddings

Por Tong, Alexander, Huguet, Guillaume, Natik, Amine, MacDonald, Kincaid, Kuchroo, Manik, Coifman, Ronald, Wolf, Guy, Krishnaswamy, Smita
Publicado no ArXiv (2021)

Neural network predicts need for red blood cell transfusion for patients with acute gastrointestinal bleeding admitted to the intensive care unit

Por Shung, Dennis, Huang, Jessie, Castro, Egbert, Tay, J. Kenneth, Simonov, Michael, Laine, Loren, Batra, Ramesh, Krishnaswamy, Smita
Publicado no Sci Rep (2021)

Conditional Density-based Analysis of T cell Signaling in Single Cell Data

Por Krishnaswamy, Smita, Spitzer, Matthew H., Mingueneau, Michael, Bendall, Sean C, Litvin, Oren, Stone, Erica, Pe’er, Dana, Nolan, Garry P
Publicado no Science (2014)

Multiparameter single cell profiling of airway inflammatory cells

Por Yao, Yi, Welp, Tobias, Liu, Qing, Niu, Naiqian, Wang, Xiaomei, Britto, Clemente J., Krishnaswamy, Smita, Chupp, Geoff L., Montgomery, Ruth R.
Publicado no Cytometry B Clin Cytom (2017)

Normalization of mass cytometry data with bead standards

Por Finck, Rachel, Simonds, Erin F., Jager, Astraea, Krishnaswamy, Smita, Sachs, Karen, Fantl, Wendy, Pe’er, Dana, Nolan, Garry P., Bendall, Sean C.
Publicado em 2013

Macrophage migration inhibitory factor regulates U1-snRNP immune complex mediated activation of the NLRP3 inflammasome

Por Shin, Min Sun, Kang, Youna, Wahl, Elizabeth R., Park, Hong-Jai, Lazova, Rossitza, Leng, Lin, Mamula, Mark, Krishnaswamy, Smita, Bucala, Richard, Kang, Insoo
Publicado no Arthritis Rheumatol (2018)

MLL-AF9 initiates transformation from fast-proliferating myeloid progenitors

Por Chen, Xinyue, Burkhardt, Daniel B., Hartman, Amaleah A., Hu, Xiao, Eastman, Anna E., Sun, Chao, Wang, Xujun, Zhong, Mei, Krishnaswamy, Smita, Guo, Shangqin
Publicado no Nat Commun (2019)

Publisher Correction: MLL-AF9 initiates transformation from fast-proliferating myeloid progenitors

Por Chen, Xinyue, Burkhardt, Daniel B., Hartman, Amaleah A., Hu, Xiao, Eastman, Anna E., Sun, Chao, Wang, Xujun, Zhong, Mei, Krishnaswamy, Smita, Guo, Shangqin
Publicado no Nat Commun (2020)

Dissecting alterations in human CD8+ T cells with aging by high-dimensional single cell mass cytometry

Por Shin, Min Sun, Yim, Kristina, Moon, Kevin, Park, Hong-Jai, Mohanty, Subhasis, Kim, Joseph W., Montgomery, Ruth R., Shaw, Albert C., Krishnaswamy, Smita, Kang, Insoo
Publicado no Clin Immunol (2019)

Coarse Graining of Data via Inhomogeneous Diffusion Condensation

Por Brugnone, Nathan, Gonopolskiy, Alex, Moyle, Mark W., Kuchroo, Manik, van Dijk, David, Moon, Kevin R., Colon-Ramos, Daniel, Wolf, Guy, Hirn, Matthew J., Krishnaswamy, Smita
Publicado no Proc IEEE Int Conf Big Data (2020)

IL-7 receptor alpha defines heterogeneity and signature of human effector memory CD8(+) T cells in high dimensional analysis

Por Shin, Min Sun, Kim, Dongjoo, Yim, Kristina, Park, Hong-Jai, You, Sungyong, Dong, Xuemei, Koumpouras, Fotios, Shaw, Albert C., Fan, Rong, Krishnaswamy, Smita, Kang, Insoo
Publicado no Cell Immunol (2020)

Single-cell mass cytometry of TCR signaling: Amplification of small initial differences results in low ERK activation in NOD mice

Por Mingueneau, Michael, Krishnaswamy, Smita, Spitzer, Matthew H., Bendall, Sean C., Stone, Erica L., Hedrick, Stephen M., Pe'er, Dana, Mathis, Diane, Nolan, Garry P., Benoist, Christophe
Publicado no Proc Natl Acad Sci U S A (2014)

Identification and analysis of islet antigen specific CD8+ T cells with T cell libraries

Por Ogura, Hideki, Preston-Hurlburt, Paula, Perdigoto, Ana Luisa, Amodio, Matthew, Krishnaswamy, Smita, Clark, Pamela, Yu, Hua, Egli, Dieter, Fouts, Alexandra, Steck, Andrea K., Herold, Kevan C
Publicado no J Immunol (2018)

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

Por Amir, El-ad David, Davis, Kara L, Tadmor, Michelle D, Simonds, Erin F, Levine, Jacob H, Bendall, Sean C, Shenfeld, Daniel K, Krishnaswamy, Smita, Nolan, Garry P, Pe’er, Dana
Publicado em 2013

PD-1 marks dysfunctional regulatory T cells in malignant gliomas

Por Lowther, Daniel E., Goods, Brittany A., Lucca, Liliana E., Lerner, Benjamin A., Raddassi, Khadir, van Dijk, David, Hernandez, Amanda L., Duan, Xiangguo, Gunel, Murat, Coric, Vlad, Krishnaswamy, Smita, Love, J. Christopher, Hafler, David A.
Publicado no JCI Insight (2016)

Recovering gene interactions from single-cell data using data diffusion

Por van Dijk, David, Sharma, Roshan, Nainys, Juozas, Yim, Kristina, Kathail, Pooja, Carr, Ambrose, Burdziak, Cassandra, Moon, Kevin R., Chaffer, Christine L., Pattabiraman, Diwakar, Bierie, Brian, Mazutis, Linas, Wolf, Guy, Krishnaswamy, Smita, Pe’er, Dana
Publicado no Cell (2018)