The PARP Side of the Nucleus: Molecular Actions, Physiological Outcomes, and Clinical Targets

door Krishnakumar, Raga, Kraus, W. Lee
Gepubliceerd in 2010

PARP-1 Regulates Chromatin Structure and Transcription Through a KDM5B-Dependent Pathway

door Krishnakumar, Raga, Kraus, W. Lee
Gepubliceerd in 2010

Epigenetics of Cellular Reprogramming

door Krishnakumar, Raga, Blelloch, Robert H.
Gepubliceerd in Curr Opin Genet Dev (2013)

Expression of alternative Ago2 isoform associated with loss of microRNA driven translational repression in mouse oocytes

door Freimer, Jacob W., Krishnakumar, Raga, Cook, Matthew S., Blelloch, Robert
Gepubliceerd in Curr Biol (2018)

Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses

door Luo, Xin, Chae, Minho, Krishnakumar, Raga, Danko, Charles G, Kraus, W Lee
Gepubliceerd in 2014

The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing

door Gamble, Matthew J., Frizzell, Kristine M., Yang, Christine, Krishnakumar, Raga, Kraus, W. Lee
Gepubliceerd in 2010

Gene editing and CRISPR in the clinic: current and future perspectives

door Hirakawa, Matthew P., Krishnakumar, Raga, Timlin, Jerilyn A., Carney, James P., Butler, Kimberly S.
Gepubliceerd in Biosci Rep (2020)

Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

door Edwards, Harrison S., Krishnakumar, Raga, Sinha, Anupama, Bird, Sara W., Patel, Kamlesh D., Bartsch, Michael S.
Gepubliceerd in Sci Rep (2019)

Publisher Correction: Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

door Edwards, Harrison S., Krishnakumar, Raga, Sinha, Anupama, Bird, Sara W., Patel, Kamlesh D., Bartsch, Michael S.
Gepubliceerd in Sci Rep (2019)

GRHL2-dependent enhancer switching maintains a pluripotent stem cell transcriptional subnetwork after exit from naïve pluripotency

door Chen, Amy F., Liu, Arthur J., Krishnakumar, Raga, Freimer, Jake W., DeVeale, Brian, Blelloch, Robert
Gepubliceerd in Cell Stem Cell (2018)

FOXD3 Regulates Pluripotent Stem Cell Potential by Simultaneously Initiating and Repressing Enhancer Activity

door Krishnakumar, Raga, Chen, Amy F., Pantovich, Marisol G., Danial, Muhammad, Parchem, Ronald J., Labosky, Patricia A., Blelloch, Robert
Gepubliceerd in Cell Stem Cell (2016)

New candidates for regulated gene integrity revealed through precise mapping of integrative genetic elements

door Mageeney, Catherine M, Lau, Britney Y, Wagner, Julian M, Hudson, Corey M, Schoeniger, Joseph S, Krishnakumar, Raga, Williams, Kelly P
Gepubliceerd in Nucleic Acids Res (2020)

Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias

door Krishnakumar, Raga, Sinha, Anupama, Bird, Sara W., Jayamohan, Harikrishnan, Edwards, Harrison S., Schoeniger, Joseph S., Patel, Kamlesh D., Branda, Steven S., Bartsch, Michael S.
Gepubliceerd in Sci Rep (2018)

Global Analysis of Transcriptional Regulation by Poly(ADP-ribose) Polymerase-1 and Poly(ADP-ribose) Glycohydrolase in MCF-7 Human Breast Cancer Cells

door Frizzell, Kristine M., Gamble, Matthew J., Berrocal, Jhoanna G., Zhang, Tong, Krishnakumar, Raga, Cen, Yana, Sauve, Anthony A., Kraus, W. Lee
Gepubliceerd in 2009

Two miRNA clusters reveal alternative paths in late-stage reprogramming

door Parchem, Ronald J., Ye, Julia, Judson, Robert L., LaRussa, Marie F., Krishnakumar, Raga, Blelloch, Amy, Oldham, Michael C., Blelloch, Robert
Gepubliceerd in Cell Stem Cell (2014)

Enzymes in the NAD(+) Salvage Pathway Regulate SIRT1 Activity at Target Gene Promoters

door Zhang, Tong, Berrocal, Jhoanna G., Frizzell, Kristine M., Gamble, Matthew J., DuMond, Michelle E., Krishnakumar, Raga, Yang, Tianle, Sauve, Anthony A., Kraus, W. Lee
Gepubliceerd in 2009

Regulation of Poly(ADP-ribose) Polymerase-1-dependent Gene Expression through Promoter-directed Recruitment of a Nuclear NAD(+) Synthase

door Zhang, Tong, Berrocal, Jhoanna G., Yao, Jie, DuMond, Michelle E., Krishnakumar, Raga, Ruhl, Donald D., Ryu, Keun Woo, Gamble, Matthew J., Kraus, W. Lee
Gepubliceerd in 2012

Extraction and biomolecular analysis of dermal interstitial fluid collected with hollow microneedles

door Miller, Philip R., Taylor, Robert M., Tran, Bao Quoc, Boyd, Gabrielle, Glaros, Trevor, Chavez, Victor H., Krishnakumar, Raga, Sinha, Anupama, Poorey, Kunal, Williams, Kelly P., Branda, Steven S., Baca, Justin T., Polsky, Ronen
Gepubliceerd in Commun Biol (2018)