Gene Fusion Markup Language: a prototype for exchanging gene fusion data

द्वारा Kalyana-Sundaram, Shanker, Shanmugam, Achiraman, Chinnaiyan, Arul M
प्रकाशित 2012

SLC45A3-ELK4 Chimera in Prostate Cancer: Spotlight on Cis-Splicing

द्वारा Kumar-Sinha, Chandan, Kalyana-Sundaram, Shanker, Chinnaiyan, Arul M.
प्रकाशित 2012

Landscape of gene fusions in epithelial cancers: seq and ye shall find

द्वारा Kumar-Sinha, Chandan, Kalyana-Sundaram, Shanker, Chinnaiyan, Arul M.
में प्रकाशित Genome Med (2015)

miRConnect 2.0: identification of oncogenic, antagonistic miRNA families in three human cancers

द्वारा Hua, Youjia, Larsen, Niels, Kalyana-Sundaram, Shanker, Kjems, Jørgen, Chinnaiyan, Arul M, Peter, Marcus E
प्रकाशित 2013

HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

द्वारा Qin, Zhaohui S, Yu, Jianjun, Shen, Jincheng, Maher, Christopher A, Hu, Ming, Kalyana-Sundaram, Shanker, Yu, Jindan, Chinnaiyan, Arul M
प्रकाशित 2010

Gene Fusions Associated with Recurrent Amplicons Represent a Class of Passenger Aberrations in Breast Cancer

द्वारा Kalyana-Sundaram, Shanker, Shankar, Sunita, DeRoo, Scott, Iyer, Matthew K, Palanisamy, Nallasivam, Chinnaiyan, Arul M, Kumar-Sinha, Chandan
प्रकाशित 2012

Heat Shock Protein Beta-1 Modifies Anterior to Posterior Purkinje Cell Vulnerability in a Mouse Model of Niemann-Pick Type C Disease

द्वारा Chung, Chan, Elrick, Matthew J., Dell’Orco, James M., Qin, Zhaohui S., Kalyana-Sundaram, Shanker, Chinnaiyan, Arul M., Shakkottai, Vikram G., Lieberman, Andrew P.
में प्रकाशित PLoS Genet (2016)

Transcriptome Sequencing to Detect Gene Fusions in Cancer

द्वारा Maher, Christopher A., Kumar-Sinha, Chandan, Cao, Xuhong, Kalyana-Sundaram, Shanker, Han, Bo, Jing, Xiaojun, Sam, Lee, Barrette, Terrence, Palanisamy, Nallasivam, Chinnaiyan, Arul M.
प्रकाशित 2009

Molecular Concepts Analysis Links Tumors, Pathways, Mechanisms, and Drugs

द्वारा Rhodes, Daniel R, Kalyana-Sundaram, Shanker, Tomlins, Scott A, Mahavisno, Vasudeva, Kasper, Nicole, Varambally, Radhika, Barrette, Terrence R, Ghosh, Debashis, Varambally, Sooryanarayana, Chinnaiyan, Arul M
प्रकाशित 2007

Quantitative Proteomic Profiling of Prostate Cancer Reveals a Role for miR-128 in Prostate Cancer

द्वारा Khan, Amjad P., Poisson, Laila M., Bhat, Vadiraja B., Fermin, Damian, Zhao, Rong, Kalyana-Sundaram, Shanker, Michailidis, George, Nesvizhskii, Alexey I., Omenn, Gilbert S., Chinnaiyan, Arul M., Sreekumar, Arun
प्रकाशित 2010

Oncomine 3.0: Genes, Pathways, and Networks in a Collection of 18,000 Cancer Gene Expression Profiles

द्वारा Rhodes, Daniel R, Kalyana-Sundaram, Shanker, Mahavisno, Vasudeva, Varambally, Radhika, Yu, Jianjun, Briggs, Benjamin B, Barrette, Terrence R, Anstet, Matthew J, Kincead-Beal, Colleen, Kulkarni, Prakash, Varambally, Sooryanaryana, Ghosh, Debashis, Chinnaiyan, Arul M
प्रकाशित 2007

Recurrent reciprocal RNA chimera involving YPEL5 and PPP1CB in chronic lymphocytic leukemia

द्वारा Velusamy, Thirunavukkarasu, Palanisamy, Nallasivam, Kalyana-Sundaram, Shanker, Sahasrabuddhe, Anagh Anant, Maher, Christopher A., Robinson, Daniel R., Bahler, David W., Cornell, Timothy T., Wilson, Thomas E., Lim, Megan S., Chinnaiyan, Arul M., Elenitoba-Johnson, Kojo S. J.
प्रकाशित 2013

Chimeric transcript discovery by paired-end transcriptome sequencing

द्वारा Maher, Christopher A., Palanisamy, Nallasivam, Brenner, John C., Cao, Xuhong, Kalyana-Sundaram, Shanker, Luo, Shujun, Khrebtukova, Irina, Barrette, Terrence R., Grasso, Catherine, Yu, Jindan, Lonigro, Robert J., Schroth, Gary, Kumar-Sinha, Chandan, Chinnaiyan, Arul M.
प्रकाशित 2009

Outlier Kinase Expression by RNA Sequencing as Targets for Precision Therapy

द्वारा Kothari, Vishal, Wei, Iris, Shankar, Sunita, Kalyana-Sundaram, Shanker, Wang, Lidong, Ma, Linda W., Vats, Pankaj, Grasso, Catherine S., Robinson, Dan R., Wu, Yi-Mi, Cao, Xuhong, Simeone, Diane M., Chinnaiyan, Arul M., Kumar-Sinha, Chandan
प्रकाशित 2013

Characterization of Gene Expression Phenotype in Amyotrophic Lateral Sclerosis Monocytes

द्वारा Zhao, Weihua, Beers, David R., Hooten, Kristopher G., Sieglaff, Douglas H., Zhang, Aijun, Kalyana-Sundaram, Shanker, Traini, Christopher M., Halsey, Wendy S., Hughes, Ashley M., Sathe, Ganesh M., Livi, George P., Fan, Guo-Huang, Appel, Stanley H.
में प्रकाशित JAMA Neurol (2017)

Primary Urethral Clear-Cell Adenocarcinoma: Comprehensive Analysis by Surgical Pathology, Cytopathology, and Next-Generation Sequencing

द्वारा Mehra, Rohit, Vats, Pankaj, Kalyana-Sundaram, Shanker, Udager, Aaron M., Roh, Michael, Alva, Ajjai, Pan, Jincheng, Lonigro, Robert J., Siddiqui, Javed, Weizer, Alon, Lee, Cheryl, Cao, Xuhong, Wu, Yi-Mi, Robinson, Dan R., Dhanasekaran, Saravana M., Chinnaiyan, Arul M.
प्रकाशित 2014

AGTR1 overexpression defines a subset of breast cancer and confers sensitivity to losartan, an AGTR1 antagonist

द्वारा Rhodes, Daniel R., Ateeq, Bushra, Cao, Qi, Tomlins, Scott A., Mehra, Rohit, Laxman, Bharathi, Kalyana-Sundaram, Shanker, Lonigro, Robert J., Helgeson, Beth E., Bhojani, Mahaveer S., Rehemtulla, Alnawaz, Kleer, Celina G., Hayes, Daniel F., Lucas, Peter C., Varambally, Sooryanarayana, Chinnaiyan, Arul M.
प्रकाशित 2009

The tumor suppressor gene rap1GAP is silenced by mir-101-mediated EZH2 overexpression in invasive squamous cell carcinoma

द्वारा Banerjee, Rajat, Mani, Ram-Shankar, Russo, Nickole, Scanlon, Christina S., Tsodikov, Alexander, Jing, Xiaojun, Cao, Qi, Palanisamy, Nallasivam, Metwally, Tarek, Inglehart, Ronald C., Tomlins, Scott, Bradford, Carol, Carey, Thomas, Wolf, Gregory, Kalyana-Sundaram, Shanker, Chinnaiyan, Arul M., Varambally, Sooryanarayana, D’Silva, Nisha J.
प्रकाशित 2011

Expressed Pseudogenes in the Transcriptional Landscape of Human Cancers

द्वारा Kalyana-Sundaram, Shanker, Kumar-Sinha, Chandan, Shankar, Sunita, Robinson, Dan R., Wu, Yi-Mi, Cao, Xuhong, Asangani, Irfan A., Kothari, Vishal, Prensner, John R., Lonigro, Robert J., Iyer, Matthew K., Barrette, Terrence, Shanmugam, Achiraman, Dhanasekaran, Saravana M., Palanisamy, Nallasivam, Chinnaiyan, Arul M.
प्रकाशित 2012

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

द्वारा Kim, Jung H., Dhanasekaran, Saravana M., Prensner, John R., Cao, Xuhong, Robinson, Daniel, Kalyana-Sundaram, Shanker, Huang, Christina, Shankar, Sunita, Jing, Xiaojun, Iyer, Matthew, Hu, Ming, Sam, Lee, Grasso, Catherine, Maher, Christopher A., Palanisamy, Nallasivam, Mehra, Rohit, Kominsky, Hal D., Siddiqui, Javed, Yu, Jindan, Qin, Zhaohui S., Chinnaiyan, Arul M.
प्रकाशित 2011