Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression

Por Rhodes, Daniel R., Yu, Jianjun, Shanker, K., Deshpande, Nandan, Varambally, Radhika, Ghosh, Debashis, Barrette, Terrence, Pandey, Akhilesh, Chinnaiyan, Arul M.
Publicado em 2004

C5a-Induced Gene Expression in Human Umbilical Vein Endothelial Cells

Por Albrecht, Eric A., Chinnaiyan, Arul M., Varambally, Sooryanarayana, Kumar-Sinha, Chandan, Barrette, Terrence R., Sarma, J. Vidya, Ward, Peter A.
Publicado em 2004

ONCOMINE: A Cancer Microarray Database and Integrated Data-Mining Platform

Por Rhodes, Daniel R, Yu, Jianjun, Shanker, K, Deshpande, Nandan, Varambally, Radhika, Ghosh, Debashis, Barrette, Terrence, Pandey, Akhilesh, Chinnaiyan, Arul M
Publicado em 2004

Molecular Signatures of Sepsis : Multiorgan Gene Expression Profiles of Systemic Inflammation

Por Chinnaiyan, Arul M., Huber-Lang, Markus, Kumar-Sinha, Chandan, Barrette, Terrence R., Shankar-Sinha, Sunita, Sarma, Vidya J., Padgaonkar, Vaishalee A., Ward, Peter A.
Publicado em 2001

Transcriptome Sequencing to Detect Gene Fusions in Cancer

Por Maher, Christopher A., Kumar-Sinha, Chandan, Cao, Xuhong, Kalyana-Sundaram, Shanker, Han, Bo, Jing, Xiaojun, Sam, Lee, Barrette, Terrence, Palanisamy, Nallasivam, Chinnaiyan, Arul M.
Publicado em 2009

Molecular Concepts Analysis Links Tumors, Pathways, Mechanisms, and Drugs

Por Rhodes, Daniel R, Kalyana-Sundaram, Shanker, Tomlins, Scott A, Mahavisno, Vasudeva, Kasper, Nicole, Varambally, Radhika, Barrette, Terrence R, Ghosh, Debashis, Varambally, Sooryanarayana, Chinnaiyan, Arul M
Publicado em 2007

Oncomine 3.0: Genes, Pathways, and Networks in a Collection of 18,000 Cancer Gene Expression Profiles

Por Rhodes, Daniel R, Kalyana-Sundaram, Shanker, Mahavisno, Vasudeva, Varambally, Radhika, Yu, Jianjun, Briggs, Benjamin B, Barrette, Terrence R, Anstet, Matthew J, Kincead-Beal, Colleen, Kulkarni, Prakash, Varambally, Sooryanaryana, Ghosh, Debashis, Chinnaiyan, Arul M
Publicado em 2007

α-Methylacyl-CoA Racemase: Expression Levels of this Novel Cancer Biomarker Depend on Tumor Differentiation

Por Kuefer, Rainer, Varambally, Sooryanarayana, Zhou, Ming, Lucas, Peter C., Loeffler, Martin, Wolter, Hubertus, Mattfeldt, Torsten, Hautmann, Richard E., Gschwend, Juergen E., Barrette, Terrence R., Dunn, Rodney L., Chinnaiyan, Arul M., Rubin, Mark A.
Publicado em 2002

Chimeric transcript discovery by paired-end transcriptome sequencing

Por Maher, Christopher A., Palanisamy, Nallasivam, Brenner, John C., Cao, Xuhong, Kalyana-Sundaram, Shanker, Luo, Shujun, Khrebtukova, Irina, Barrette, Terrence R., Grasso, Catherine, Yu, Jindan, Lonigro, Robert J., Schroth, Gary, Kumar-Sinha, Chandan, Chinnaiyan, Arul M.
Publicado em 2009

Expressed Pseudogenes in the Transcriptional Landscape of Human Cancers

Por Kalyana-Sundaram, Shanker, Kumar-Sinha, Chandan, Shankar, Sunita, Robinson, Dan R., Wu, Yi-Mi, Cao, Xuhong, Asangani, Irfan A., Kothari, Vishal, Prensner, John R., Lonigro, Robert J., Iyer, Matthew K., Barrette, Terrence, Shanmugam, Achiraman, Dhanasekaran, Saravana M., Palanisamy, Nallasivam, Chinnaiyan, Arul M.
Publicado em 2012

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing

Por Pflueger, Dorothee, Terry, Stéphane, Sboner, Andrea, Habegger, Lukas, Esgueva, Raquel, Lin, Pei-Chun, Svensson, Maria A., Kitabayashi, Naoki, Moss, Benjamin J., MacDonald, Theresa Y., Cao, Xuhong, Barrette, Terrence, Tewari, Ashutosh K., Chee, Mark S., Chinnaiyan, Arul M., Rickman, David S., Demichelis, Francesca, Gerstein, Mark B., Rubin, Mark A.
Publicado em 2011

The Landscape of Long Noncoding RNAs in the Human Transcriptome

Por Iyer, Matthew K., Niknafs, Yashar S., Malik, Rohit, Singhal, Udit, Sahu, Anirban, Hosono, Yasuyuki, Barrette, Terrence R., Prensner, John R., Evans, Joseph R., Zhao, Shuang, Poliakov, Anton, Cao, Xuhong, Dhanasekaran, Saravana M., Wu, Yi-Mi, Robinson, Dan R., Beer, David G., Feng, Felix Y., Iyer, Hariharan K., Chinnaiyan, Arul M.
Publicado no Nat Genet (2015)

An Integrated Network of Androgen Receptor, Polycomb, and TMPRSS2-ERG Gene Fusions in Prostate Cancer Progression

Por Yu, Jindan, Yu, Jianjun, Mani, Ram-Shankar, Cao, Qi, Brenner, Chad J., Cao, Xuhong, Wang, George X., Wu, Longtao, Li, James, Hu, Ming, Gong, Yusong, Cheng, Hong, Laxman, Bharathi, Vellaichamy, Adaikkalam, Shankar, Sunita, Li, Yong, Dhanasekaran, Saravana M., Morey, Roger, Barrette, Terrence, Lonigro, Robert J., Tomlins, Scott A., Varambally, Sooryanarayana, Qin, Zhaohui S., Chinnaiyan, Arul M.
Publicado em 2010

Personalized Oncology Through Integrative High-Throughput Sequencing: A Pilot Study

Por Roychowdhury, Sameek, Iyer, Matthew K., Robinson, Dan R., Lonigro, Robert J., Wu, Yi-Mi, Cao, Xuhong, Kalyana-Sundaram, Shanker, Sam, Lee, Balbin, O. Alejandro, Quist, Michael J., Barrette, Terrence, Everett, Jessica, Siddiqui, Javed, Kunju, Lakshmi P., Navone, Nora, Araujo, John C., Troncoso, Patricia, Logothetis, Christopher J., Innis, Jeffrey W., Smith, David C., Lao, Christopher D., Kim, Scott Y., Roberts, J. Scott, Gruber, Stephen B., Pienta, Kenneth J., Talpaz, Moshe, Chinnaiyan, Arul M.
Publicado em 2011