Interpretation of the Consequences of Mutations in Protein Kinases: Combined Use of Bioinformatics and Text Mining

由 Izarzugaza, Jose M. G., Krallinger, Martin, Valencia, Alfonso
出版 2012

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

由 Matey-Hernandez, Maria Luisa, Brunak, Søren, Izarzugaza, Jose M. G.
發表在 BMC Bioinformatics (2018)

From cancer genomes to cancer models: bridging the gaps

由 Baudot, Anaïs, Real, Francisco X., Izarzugaza, José M. G., Valencia, Alfonso
出版 2009

Prediction of Disease Causing Non-Synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP

由 Johansen, Morten Bo, Izarzugaza, Jose M. G., Brunak, Søren, Petersen, Thomas Nordahl, Gupta, Ramneek
出版 2013

TSEMA: interactive prediction of protein pairings between interacting families

由 Izarzugaza, José M. G., Juan, David, Pons, Carles, Ranea, Juan A. G., Valencia, Alfonso, Pazos, Florencio
出版 2006

Identification of hyper-rewired genomic stress non-oncogene addiction genes across 15 cancer types

由 Hjaltelin, Jessica Xin, Izarzugaza, Jose M. G., Jensen, Lars Juhl, Russo, Francesco, Westergaard, David, Brunak, Søren
發表在 NPJ Syst Biol Appl (2019)

Tumor Mutation Burden Forecasts Outcome in Ovarian Cancer with BRCA1 or BRCA2 Mutations

由 Birkbak, Nicolai Juul, Kochupurakkal, Bose, Izarzugaza, Jose M. G., Eklund, Aron C., Li, Yang, Liu, Joyce, Szallasi, Zoltan, Matulonis, Ursula A., Richardson, Andrea L., Iglehart, J. Dirk, Wang, Zhigang C.
出版 2013

Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing

由 Mollerup, Sarah, Friis-Nielsen, Jens, Vinner, Lasse, Hansen, Thomas Arn, Richter, Stine Raith, Fridholm, Helena, Herrera, Jose Alejandro Romero, Lund, Ole, Brunak, Søren, Izarzugaza, Jose M. G., Mourier, Tobias, Nielsen, Lars Peter, Hansen, Anders Johannes
發表在 J Clin Microbiol (2016)

Cutavirus in Cutaneous Malignant Melanoma

由 Mollerup, Sarah, Fridholm, Helena, Vinner, Lasse, Kjartansdóttir, Kristín Rós, Friis-Nielsen, Jens, Asplund, Maria, Herrera, Jose A.R., Steiniche, Torben, Mourier, Tobias, Brunak, Søren, Willerslev, Eske, Izarzugaza, Jose M.G., Hansen, Anders J., Nielsen, Lars P.
發表在 Emerg Infect Dis (2017)

Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing

由 Vinner, Lasse, Mourier, Tobias, Friis-Nielsen, Jens, Gniadecki, Robert, Dybkaer, Karen, Rosenberg, Jacob, Langhoff, Jill Levin, Cruz, David Flores Santa, Fonager, Jannik, Izarzugaza, Jose M. G., Gupta, Ramneek, Sicheritz-Ponten, Thomas, Brunak, Søren, Willerslev, Eske, Nielsen, Lars Peter, Hansen, Anders Johannes
發表在 Sci Rep (2015)

Analysis of a gene panel for targeted sequencing of colorectal cancer samples

由 Jensen, Klaus Højgaard, Izarzugaza, Jose M.G., Juncker, Agnieszka Sierakowska, Hansen, Rasmus Borup, Hansen, Torben Frøstrup, Timshel, Pascal, Blondal, Thorarinn, Jensen, Thomas Skøt, Rygaard-Hjalsted, Eske, Mouritzen, Peter, Thorsen, Michael, Wernersson, Rasmus, Nielsen, Henrik Bjørn, Jakobsen, Anders, Brunak, Søren, Sørensen, Flemming Brandt
發表在 Oncotarget (2018)

Systems genetics analysis identifies calcium-signaling defects as novel cause of congenital heart disease

由 Izarzugaza, Jose M. G., Ellesøe, Sabrina G., Doganli, Canan, Ehlers, Natasja Spring, Dalgaard, Marlene D., Audain, Enrique, Dombrowsky, Gregor, Banasik, Karina, Sifrim, Alejandro, Wilsdon, Anna, Thienpont, Bernard, Breckpot, Jeroen, Gewillig, Marc, Brook, J. David, Hitz, Marc-Phillip, Larsen, Lars A., Brunak, Søren
發表在 Genome Med (2020)

Traces of ATCV-1 associated with laboratory component contamination

由 Kjartansdóttir, Kristín Rós, Friis-Nielsen, Jens, Asplund, Maria, Mollerup, Sarah, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Alquezar-Planas, David E., Olsen, Pernille V. S., Vinner, Lasse, Fridholm, Helena, Sicheritz-Pontén, Thomas, Nielsen, Lars Peter, Brunak, Søren, Willerslev, Eske, Izarzugaza, Jose M. G., Hansen, Anders Johannes
發表在 Proc Natl Acad Sci U S A (2015)

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers

由 Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Mollerup, Sarah, Asplund, Maria, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Nielsen, Ida Broman, Alquezar-Planas, David E., Olsen, Pernille V. S., Vinner, Lasse, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Sicheritz-Pontén, Thomas, Lund, Ole, Hansen, Anders Johannes, Izarzugaza, Jose M. G., Brunak, Søren
發表在 Viruses (2016)

Pathway and network analysis of more than 2500 whole cancer genomes

由 Reyna, Matthew A., Haan, David, Paczkowska, Marta, Verbeke, Lieven P. C., Vazquez, Miguel, Kahraman, Abdullah, Pulido-Tamayo, Sergio, Barenboim, Jonathan, Wadi, Lina, Dhingra, Priyanka, Shrestha, Raunak, Getz, Gad, Lawrence, Michael S., Pedersen, Jakob Skou, Rubin, Mark A., Wheeler, David A., Brunak, Søren, Izarzugaza, Jose M. G., Khurana, Ekta, Marchal, Kathleen, von Mering, Christian, Sahinalp, S. Cenk, Valencia, Alfonso, Reimand, Jüri, Stuart, Joshua M., Raphael, Benjamin J.
發表在 Nat Commun (2020)

Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios

由 Besenbacher, Søren, Liu, Siyang, Izarzugaza, José M. G., Grove, Jakob, Belling, Kirstine, Bork-Jensen, Jette, Huang, Shujia, Als, Thomas D., Li, Shengting, Yadav, Rachita, Rubio-García, Arcadio, Lescai, Francesco, Demontis, Ditte, Rao, Junhua, Ye, Weijian, Mailund, Thomas, Friborg, Rune M., Pedersen, Christian N. S., Xu, Ruiqi, Sun, Jihua, Liu, Hao, Wang, Ou, Cheng, Xiaofang, Flores, David, Rydza, Emil, Rapacki, Kristoffer, Damm Sørensen, John, Chmura, Piotr, Westergaard, David, Dworzynski, Piotr, Sørensen, Thorkild I. A., Lund, Ole, Hansen, Torben, Xu, Xun, Li, Ning, Bolund, Lars, Pedersen, Oluf, Eiberg, Hans, Krogh, Anders, Børglum, Anders D., Brunak, Søren, Kristiansen, Karsten, Schierup, Mikkel H., Wang, Jun, Gupta, Ramneek, Villesen, Palle, Rasmussen, Simon
發表在 Nat Commun (2015)

High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach

由 Mollerup, Sarah, Asplund, Maria, Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Fridholm, Helena, Hansen, Thomas Arn, Herrera, José Alejandro Romero, Barnes, Christopher James, Jensen, Randi Holm, Richter, Stine Raith, Nielsen, Ida Broman, Pietroni, Carlotta, Alquezar-Planas, David E, Rey-Iglesia, Alba, Olsen, Pernille V S, Rajpert-De Meyts, Ewa, Groth-Pedersen, Line, von Buchwald, Christian, Jensen, David H, Gniadecki, Robert, Høgdall, Estrid, Langhoff, Jill Levin, Pete, Imre, Vereczkey, Ildikó, Baranyai, Zsolt, Dybkaer, Karen, Johnsen, Hans Erik, Steiniche, Torben, Hokland, Peter, Rosenberg, Jacob, Baandrup, Ulrik, Sicheritz-Pontén, Thomas, Willerslev, Eske, Brunak, Søren, Lund, Ole, Mourier, Tobias, Vinner, Lasse, Izarzugaza, Jose M G, Nielsen, Lars Peter, Hansen, Anders Johannes
發表在 J Infect Dis (2019)