High-Dimensional Single-Cell Cancer Biology

Por Doxie, Deon B., Irish, Jonathan M.
Publicado em 2014

Web-Based Analysis and Publication of Flow Cytometry Experiments

Por Kotecha, Nikesh, Krutzik, Peter O., Irish, Jonathan M.
Publicado em 2010

Characterizing Phenotypes and Signaling Networks of Single Human Cells by Mass Cytometry

Por Leelatian, Nalin, Diggins, Kirsten E., Irish, Jonathan M.
Publicado no Methods Mol Biol (2015)

Methods for discovery and characterization of cell subsets in high dimensional mass cytometry data

Por Diggins, Kirsten E., Ferrell, P. Brent, Irish, Jonathan M.
Publicado no Methods (2015)

Altered B-cell receptor signaling kinetics distinguish human follicular lymphoma B cells from tumor-infiltrating nonmalignant B cells

Por Irish, Jonathan M., Czerwinski, Debra K., Nolan, Garry P., Levy, Ronald
Publicado em 2006

WebFlow: A Software Package for High-Throughput Analysis of Flow Cytometry Data

Por Hammer, Mark M., Kotecha, Nikesh, Irish, Jonathan M., Nolan, Garry P., Krutzik, Peter O.
Publicado em 2009

Cutting Edge: Redox signaling hypersensitivity distinguishes human germinal center B cells

Por Polikowsky, Hannah G., Wogsland, Cara E., Diggins, Kirsten E., Huse, Kanutte, Irish, Jonathan M.
Publicado no J Immunol (2015)

In Vivo Autofluorescence Imaging of Tumor Heterogeneity in Response to Treatment

Por Shah, Amy T., Diggins, Kirsten E., Walsh, Alex J., Irish, Jonathan M., Skala, Melissa C.
Publicado no Neoplasia (2015)

Preparing Viable Single Cells from Human Tissue and Tumors for Cytomic Analysis Current Protocols in Molecular Biology UNIT 25C.1

Por Leelatian, Nalin, Doxie, Deon B., Greenplate, Allison R., Sinnaeve, Justine, Ihrie, Rebecca A., Irish, Jonathan M.
Publicado no Curr Protoc Mol Biol (2017)

Altered BCR and CD40 signalling are associated with clinical outcome in small lymphocytic lymphoma/chronic lymphocytic leukaemia and marginal zone lymphoma patients

Por Blix, Egil S., Irish, Jonathan M., Husebekk, Anne, Delabie, Jan, Tierens, Anne M., Myklebust, June H., Kolstad, Arne
Publicado em 2012

Phospho-specific flow cytometry identifies aberrant signaling in indolent B-cell lymphoma

Por Blix, Egil S, Irish, Jonathan M, Husebekk, Anne, Delabie, Jan, Forfang, Lise, Tierens, Anne M, Myklebust, June H, Kolstad, Arne
Publicado em 2012

NetworkPainter: dynamic intracellular pathway animation in Cytobank

Por Karr, Jonathan R, Guturu, Harendra, Chen, Edward Y, Blair, Stuart L, Irish, Jonathan M, Kotecha, Nikesh, Covert, Markus W
Publicado no BMC Bioinformatics (2015)

B-cell signaling networks reveal a negative prognostic human lymphoma cell subset that emerges during tumor progression

Por Irish, Jonathan M., Myklebust, June H., Alizadeh, Ash A., Houot, Roch, Sharman, Jeff P., Czerwinski, Debra K., Nolan, Garry P., Levy, Ronald
Publicado em 2010

Myelodysplastic Syndrome Revealed by Systems Immunology in a Melanoma Patient Undergoing Anti–PD-1 Therapy

Por Greenplate, Allison R., Johnson, Douglas B., Roussel, Mikael, Savona, Michael R., Sosman, Jeffrey A., Puzanov, Igor, Ferrell, P. Brent, Irish, Jonathan M.
Publicado no Cancer Immunol Res (2016)

Impaired coordination between signaling pathways is revealed in human colorectal cancer using single-cell mass cytometry of archival tissue blocks

Por Simmons, Alan J., Scurrah, Cherie’ R., McKinley, Eliot T., Herring, Charles A., Irish, Jonathan M., Washington, Mary K., Coffey, Robert J., Lau, Ken S.
Publicado no Sci Signal (2016)

Multiparameter analysis of stimulated human peripheral blood mononuclear cells: a comparison of mass and fluorescence cytometry

Por Nicholas, Katherine J., Greenplate, Allison R., Flaherty, David K., Matlock, Brittany K., Juan, Juan San, Smith, Rita M., Irish, Jonathan M., Kalams, Spyros A.
Publicado no Cytometry A (2015)

A transcription factor network model explains heterogeneity and reveals a novel hybrid phenotype in Small-Cell Lung Cancer

Por Udyavar, Akshata R., Wooten, David J., Hoeksema, Megan, Bansal, Mukesh, Califano, Andrea, Estrada, Lourdes, Schnell, Santiago, Irish, Jonathan M., Massion, Pierre P., Quaranta, Vito
Publicado no Cancer Res (2016)

K-Ras(G12D) expression induces hyperproliferation and aberrant signaling in primary hematopoietic stem/progenitor cells

Por Van Meter, Margaret E. M., Díaz-Flores, Ernesto, Archard, Joehleen A., Passegué, Emmanuelle, Irish, Jonathan M., Kotecha, Nikesh, Nolan, Garry P., Shannon, Kevin, Braun, Benjamin S.
Publicado em 2007

The Use of Fluorescently Tagged Apoptolidins in Cellular Uptake and Response Studies

Por Chong, Katherine M., Leelatian, Nalin, Deguire, Sean M., Brockman, Asa A., Earl, David, Ihrie, Rebecca A., Irish, Jonathan M., Bachmann, Brian O., Sulikowski, Gary A.
Publicado no J Antibiot (Tokyo) (2016)

Single Cell Profiling Identifies Aberrant STAT5 Activation in Myeloid Malignancies with Specific Clinical and Biologic Correlates

Por Kotecha, Nikesh, Flores, Nikki J, Irish, Jonathan M, Simonds, Erin, Sakai, Debbie S., Archambeault, Sophie, Diaz-Flores, Ernesto, Coram, Marc, Shannon, Kevin M, Nolan, Garry P, Loh, Mignon L
Publicado em 2008