Computational Prediction of miRNA Genes from Small RNA Sequencing Data

por Kang, Wenjing, Friedländer, Marc R.
Publicado en Front Bioeng Biotechnol (2015)

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

por Friedländer, Marc R., Mackowiak, Sebastian D., Li, Na, Chen, Wei, Rajewsky, Nikolaus
Publicado 2012

Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks

por Bonath, Franziska, Domingo-Prim, Judit, Tarbier, Marcel, Friedländer, Marc R, Visa, Neus
Publicado en Nucleic Acids Res (2018)

Signatures of positive selection reveal a universal role of chromatin modifiers as cancer driver genes

por Zapata, Luis, Susak, Hana, Drechsel, Oliver, Friedländer, Marc R., Estivill, Xavier, Ossowski, Stephan
Publicado en Sci Rep (2017)

miRTrace reveals the organismal origins of microRNA sequencing data

por Kang, Wenjing, Eldfjell, Yrin, Fromm, Bastian, Estivill, Xavier, Biryukova, Inna, Friedländer, Marc R.
Publicado en Genome Biol (2018)

Evolutionary Implications of the microRNA- and piRNA Complement of Lepidodermella squamata (Gastrotricha)

por Fromm, Bastian, Tosar, Juan Pablo, Aguilera, Felipe, Friedländer, Marc R., Bachmann, Lutz, Hejnol, Andreas
Publicado en Noncoding RNA (2019)

microRNA-205-5p is a modulator of insulin sensitivity that inhibits FOXO function

por Langlet, Fanny, Tarbier, Marcel, Haeusler, Rebecca A., Camastra, Stefania, Ferrannini, Eleuterio, Friedländer, Marc R., Accili, Domenico
Publicado en Mol Metab (2018)

Cytosolic splice isoform of Hsp70 nucleotide exchange factor Fes1 is required for the degradation of misfolded proteins in yeast

por Gowda, Naveen Kumar Chandappa, Kaimal, Jayasankar Mohanakrishnan, Masser, Anna E., Kang, Wenjing, Friedländer, Marc R., Andréasson, Claes
Publicado en Mol Biol Cell (2016)

Cytoplasmic protein misfolding titrates Hsp70 to activate nuclear Hsf1

por Masser, Anna E, Kang, Wenjing, Roy, Joydeep, Mohanakrishnan Kaimal, Jayasankar, Quintana-Cordero, Jany, Friedländer, Marc R, Andréasson, Claes
Publicado en eLife (2019)

Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene

por Fromm, Bastian, Tarbier, Marcel, Smith, Oliver, Mármol-Sánchez, Emilio, Dalén, Love, Gilbert, M. Tom P., Friedländer, Marc R.
Publicado en RNA (2021)

Large scale sorting of C. elegans embryos reveals the dynamics of small RNA expression

por Stoeckius, Marlon, Maaskola, Jonas, Colombo, Teresa, Rahn, Hans-Peter, Friedländer, Marc R., Li, Na, Chen, Wei, Piano, Fabio, Rajewsky, Nikolaus
Publicado 2009

Deciphering the porcine intestinal microRNA transcriptome

por Sharbati, Soroush, Friedländer, Marc R, Sharbati, Jutta, Hoeke, Lena, Chen, Wei, Keller, Andreas, Stähler, Peer F, Rajewsky, Nikolaus, Einspanier, Ralf
Publicado 2010

Upregulation of a small vault RNA (svtRNA2-1a) is an early event in Parkinson disease and induces neuronal dysfunction

por Miñones-Moyano, Elena, Friedländer, Marc R., Pallares, Joan, Kagerbauer, Birgit, Porta, Sílvia, Escaramís, Georgia, Ferrer, Isidre, Estivill, Xavier, Martí, Eulàlia
Publicado 2013

EXOSC10 is required for RPA assembly and controlled DNA end resection at DNA double-strand breaks

por Domingo-Prim, Judit, Endara-Coll, Martin, Bonath, Franziska, Jimeno, Sonia, Prados-Carvajal, Rosario, Friedländer, Marc R., Huertas, Pablo, Visa, Neus
Publicado en Nat Commun (2019)

A combined approach for single-cell mRNA and intracellular protein expression analysis

por Reimegård, Johan, Tarbier, Marcel, Danielsson, Marcus, Schuster, Jens, Baskaran, Sathishkumar, Panagiotou, Styliani, Dahl, Niklas, Friedländer, Marc R., Gallant, Caroline J.
Publicado en Commun Biol (2021)

Select microRNAs are essential for early development in the sea urchin

por Song, Jia L., Stoeckius, Marlon, Maaskola, Jonas, Friedländer, Marc, Stepicheva, Nadezda, Juliano, Celina, Lebedeva, Svetlana, Thompson, William, Rajewsky, Nikolaus, Wessel, Gary M.
Publicado 2011

Survey of 800+ data sets from human tissue and body fluid reveals xenomiRs are likely artifacts

por Kang, Wenjing, Bang-Berthelsen, Claus Heiner, Holm, Anja, Houben, Anna J.S., Müller, Anne Holt, Thymann, Thomas, Pociot, Flemming, Estivill, Xavier, Friedländer, Marc R.
Publicado en RNA (2017)

Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery

por Li, Na, You, Xintian, Chen, Tao, Mackowiak, Sebastian D., Friedländer, Marc R., Weigt, Martina, Du, Hang, Gogol-Döring, Andreas, Chang, Zisong, Dieterich, Christoph, Hu, Yuhui, Chen, Wei
Publicado 2013

Control of hepatic gluconeogenesis by Argonaute2

por Yan, Xin, Wang, Zhen, Bishop, Christopher A., Weitkunat, Karolin, Feng, Xiao, Tarbier, Marcel, Luo, Jiankai, Friedländer, Marc R., Burkhardt, Ralph, Klaus, Susanne, Willnow, Thomas E., Poy, Matthew N.
Publicado en Mol Metab (2018)

MirGeneDB 2.0: the metazoan microRNA complement

por Fromm, Bastian, Domanska, Diana, Høye, Eirik, Ovchinnikov, Vladimir, Kang, Wenjing, Aparicio-Puerta, Ernesto, Johansen, Morten, Flatmark, Kjersti, Mathelier, Anthony, Hovig, Eivind, Hackenberg, Michael, Friedländer, Marc R, Peterson, Kevin J
Publicado en Nucleic Acids Res (2020)