BioModels: expanding horizons to include more modelling approaches and formats

Por Glont, Mihai, Nguyen, Tung V N, Graesslin, Martin, Hälke, Robert, Ali, Raza, Schramm, Jochen, Wimalaratne, Sarala M, Kothamachu, Varun B, Rodriguez, Nicolas, Swat, Maciej J, Eils, Jurgen, Eils, Roland, Laibe, Camille, Malik-Sheriff, Rahuman S, Chelliah, Vijayalakshmi, Le Novère, Nicolas, Hermjakob, Henning
Publicado no Nucleic Acids Res (2018)

Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters

Por Behjati Ardakani, Fatemeh, Kattler, Kathrin, Nordström, Karl, Gasparoni, Nina, Gasparoni, Gilles, Fuchs, Sarah, Sinha, Anupam, Barann, Matthias, Ebert, Peter, Fischer, Jonas, Hutter, Barbara, Zipprich, Gideon, Imbusch, Charles D., Felder, Bärbel, Eils, Jürgen, Brors, Benedikt, Lengauer, Thomas, Manke, Thomas, Rosenstiel, Philip, Walter, Jörn, Schulz, Marcel H.
Publicado no Epigenetics Chromatin (2018)

Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction

Por Schmidt, Florian, Gasparoni, Nina, Gasparoni, Gilles, Gianmoena, Kathrin, Cadenas, Cristina, Polansky, Julia K., Ebert, Peter, Nordström, Karl, Barann, Matthias, Sinha, Anupam, Fröhler, Sebastian, Xiong, Jieyi, Dehghani Amirabad, Azim, Behjati Ardakani, Fatemeh, Hutter, Barbara, Zipprich, Gideon, Felder, Bärbel, Eils, Jürgen, Brors, Benedikt, Chen, Wei, Hengstler, Jan G., Hamann, Alf, Lengauer, Thomas, Rosenstiel, Philip, Walter, Jörn, Schulz, Marcel H.
Publicado no Nucleic Acids Res (2017)

Whole genome sequencing puts forward hypotheses on metastasis evolution and therapy in colorectal cancer

Por Ishaque, Naveed, Abba, Mohammed L., Hauser, Christine, Patil, Nitin, Paramasivam, Nagarajan, Huebschmann, Daniel, Leupold, Jörg Hendrik, Balasubramanian, Gnana Prakash, Kleinheinz, Kortine, Toprak, Umut H., Hutter, Barbara, Benner, Axel, Shavinskaya, Anna, Zhou, Chan, Gu, Zuguang, Kerssemakers, Jules, Marx, Alexander, Moniuszko, Marcin, Kozlowski, Miroslaw, Reszec, Joanna, Niklinski, Jacek, Eils, Jürgen, Schlesner, Matthias, Eils, Roland, Brors, Benedikt, Allgayer, Heike
Publicado no Nat Commun (2018)

Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma

Por Northcott, Paul A, Lee, Catherine, Zichner, Thomas, Stütz, Adrian M, Erkek, Serap, Kawauchi, Daisuke, Shih, David JH, Hovestadt, Volker, Zapatka, Marc, Sturm, Dominik, Jones, David TW, Kool, Marcel, Remke, Marc, Cavalli, Florence, Zuyderduyn, Scott, Bader, Gary, VandenBerg, Scott, Esparza, Lourdes Adriana, Ryzhova, Marina, Wang, Wei, Wittmann, Andrea, Stark, Sebastian, Sieber, Laura, Seker-Cin, Huriye, Linke, Linda, Kratochwil, Fabian, Jäger, Natalie, Buchhalter, Ivo, Imbusch, Charles D, Zipprich, Gideon, Raeder, Benjamin, Schmidt, Sabine, Diessl, Nicolle, Wolf, Stephan, Wiemann, Stefan, Brors, Benedikt, Lawerenz, Chris, Eils, Jürgen, Warnatz, Hans-Jörg, Risch, Thomas, Yaspo, Marie-Laure, Weber, Ursula D, Bartholomae, Cynthia C, von Kalle, Christof, Turányi, Eszter, Hauser, Peter, Sanden, Emma, Darabi, Anna, Siesjö, Peter, Sterba, Jaroslav, Zitterbart, Karel, Sumerauer, David, van Sluis, Peter, Versteeg, Rogier, Volckmann, Richard, Koster, Jan, Schuhmann, Martin U, Ebinger, Martin, Grimes, H. Leighton, Robinson, Giles W, Gajjar, Amar, Mynarek, Martin, von Hoff, Katja, Rutkowski, Stefan, Pietsch, Torsten, Scheurlen, Wolfram, Felsberg, Jörg, Reifenberger, Guido, Kulozik, Andreas E, von Deimlmg, Andreas, Witt, Olaf, Eils, Roland, Gilbertson, Richard J, Korshunov, Andrey, Taylor, Michael D, Lichter, Peter, Korbel, Jan O, Wechsler-Reya, Robert J, Pfister, Stefan M
Publicado em 2014

ICGC PedBrain: Dissecting the genomic complexity underlying medulloblastoma

Por Jones, David TW, Jäger, Natalie, Kool, Marcel, Zichner, Thomas, Hutter, Barbara, Sultan, Marc, Cho, Yoon-Jae, Pugh, Trevor J, Hovestadt, Volker, Stütz, Adrian M, Rausch, Tobias, Warnatz, Hans-Jörg, Ryzhova, Marina, Bender, Sebastian, Sturm, Dominik, Pleier, Sabrina, Cin, Huriye, Pfaff, Elke, Sieber, Laura, Wittmann, Andrea, Remke, Marc, Witt, Hendrik, Hutter, Sonja, Tzaridis, Theophilos, Weischenfeldt, Joachim, Raeder, Benjamin, Avci, Meryem, Amstislavskiy, Vyacheslav, Zapatka, Marc, Weber, Ursula D, Wang, Qi, Lasitschka, Bärbel, Bartholomae, Cynthia C, Schmidt, Manfred, von Kalle, Christof, Ast, Volker, Lawerenz, Chris, Eils, Jürgen, Kabbe, Rolf, Benes, Vladimir, van Sluis, Peter, Koster, Jan, Volckmann, Richard, Shih, David, Betts, Matthew J, Russell, Robert B, Coco, Simona, Tonini, Gian Paolo, Schüller, Ulrich, Hans, Volkmar, Graf, Norbert, Kim, Yoo-Jin, Monoranu, Camelia, Roggendorf, Wolfgang, Unterberg, Andreas, Herold-Mende, Christel, Milde, Till, Kulozik, Andreas E, von Deimling, Andreas, Witt, Olaf, Maass, Eberhard, Rössler, Jochen, Ebinger, Martin, Schuhmann, Martin U, Frühwald, Michael C, Hasselblatt, Martin, Jabado, Nada, Rutkowski, Stefan, von Bueren, André O, Williamson, Dan, Clifford, Steven C, McCabe, Martin G, Collins, V. Peter, Wolf, Stephan, Wiemann, Stefan, Lehrach, Hans, Brors, Benedikt, Scheurlen, Wolfram, Felsberg, Jörg, Reifenberger, Guido, Northcott, Paul A, Taylor, Michael D, Meyerson, Matthew, Pomeroy, Scott L, Yaspo, Marie-Laure, Korbel, Jan O, Korshunov, Andrey, Eils, Roland, Pfister, Stefan M, Lichter, Peter
Publicado em 2012